RNA–Protein interactions for RNA: ENST00000295701.9

CNOT9-202, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 1 (best) BASIC

Gene CNOT9, Length 1,126 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-202ENST00000295701 PTPN21Q16825 1174 aa10.47□□□□□ -0.73
CNOT9-202ENST00000295701 MTERF2Q49AM1 385 aa10.47□□□□□ -0.73
CNOT9-202ENST00000295701 PKDCCQ504Y2 493 aa10.47□□□□□ -0.73
CNOT9-202ENST00000295701 TMEM173Q86WV6 379 aaPredicted RBP10.47□□□□□ -0.73
CNOT9-202ENST00000295701 ABI1Q8IZP0 508 aa10.47□□□□□ -0.73
CNOT9-202ENST00000295701 LRRC43Q8N309 656 aa10.47□□□□□ -0.73
CNOT9-202ENST00000295701 MRPL43Q8N983 215 aaKnown RBP10.47□□□□□ -0.73
CNOT9-202ENST00000295701 SLC5A5Q92911 643 aa10.47□□□□□ -0.73
CNOT9-202ENST00000295701 KCNB2Q92953 911 aa10.47□□□□□ -0.73
CNOT9-202ENST00000295701 CCDC136Q96JN2 1154 aa10.47□□□□□ -0.73
CNOT9-202ENST00000295701 SCLT1Q96NL6 688 aa10.47□□□□□ -0.73
CNOT9-202ENST00000295701 CEP89Q96ST8 783 aa10.47□□□□□ -0.73
CNOT9-202ENST00000295701 SLC26A6Q9BXS9 759 aa10.47□□□□□ -0.73
CNOT9-202ENST00000295701 NGRNQ9NPE2 291 aaKnown RBP10.47□□□□□ -0.73
CNOT9-202ENST00000295701 NRBP2Q9NSY0 501 aa10.47□□□□□ -0.73
CNOT9-202ENST00000295701 CEP131Q9UPN4 1083 aa10.47□□□□□ -0.73
CNOT9-202ENST00000295701 SNX14Q9Y5W7 946 aa10.47□□□□□ -0.73
CNOT9-202ENST00000295701 HCFC2Q9Y5Z7 792 aa10.47□□□□□ -0.73
CNOT9-202ENST00000295701 PTPRZ1P23471 2315 aaPredicted RBP10.47□□□□□ -0.73
CNOT9-202ENST00000295701 C2orf16Q68DN1 1984 aa10.46□□□□□ -0.73
CNOT9-202ENST00000295701 A0A087WZ62 844 aa10.46□□□□□ -0.73
CNOT9-202ENST00000295701 CCDC196A0A1B0GTZ2 297 aa10.46□□□□□ -0.73
CNOT9-202ENST00000295701 DGAT1O75907 488 aa10.46□□□□□ -0.73
CNOT9-202ENST00000295701 CD2BP2O95400 341 aaKnown RBP10.46□□□□□ -0.73
CNOT9-202ENST00000295701 BRD1O95696 1058 aa10.46□□□□□ -0.73
CNOT9-202ENST00000295701 ASGR2P07307 311 aa10.46□□□□□ -0.73
CNOT9-202ENST00000295701 TMOD1P28289 359 aa10.46□□□□□ -0.73
CNOT9-202ENST00000295701 GNA11P29992 359 aa10.46□□□□□ -0.73
CNOT9-202ENST00000295701 RCAN1P53805 252 aa10.46□□□□□ -0.73
CNOT9-202ENST00000295701 KRT17Q04695 432 aa10.46□□□□□ -0.73
CNOT9-202ENST00000295701 TBC1D8BQ0IIM8 1120 aa10.46□□□□□ -0.73
CNOT9-202ENST00000295701 RARS2Q5T160 578 aaKnown RBP10.46□□□□□ -0.73
CNOT9-202ENST00000295701 ZBTB33Q86T24 672 aa10.46□□□□□ -0.73
CNOT9-202ENST00000295701 KSR1Q8IVT5 923 aa10.46□□□□□ -0.73
CNOT9-202ENST00000295701 KREMEN2Q8NCW0 462 aa10.46□□□□□ -0.73
CNOT9-202ENST00000295701 BCL7CQ8WUZ0 217 aaPredicted RBP10.46□□□□□ -0.73
CNOT9-202ENST00000295701 FAM167AQ96KS9 214 aa10.46□□□□□ -0.73
CNOT9-202ENST00000295701 FDXACB1Q9BRP7 624 aaPredicted RBP10.46□□□□□ -0.73
CNOT9-202ENST00000295701 TEKT3Q9BXF9 490 aa10.46□□□□□ -0.73
CNOT9-202ENST00000295701 VPS13AQ96RL7 3174 aa10.46□□□□□ -0.74
CNOT9-202ENST00000295701 DOCK6Q96HP0 2047 aa10.45□□□□□ -0.74
CNOT9-202ENST00000295701 H0Y858 1186 aa10.45□□□□□ -0.74
CNOT9-202ENST00000295701 HOXA2O43364 376 aa10.45□□□□□ -0.74
CNOT9-202ENST00000295701 B4GALT3O60512 393 aa10.45□□□□□ -0.74
CNOT9-202ENST00000295701 GAS7O60861 476 aa10.45□□□□□ -0.74
CNOT9-202ENST00000295701 DTNBO60941 627 aa10.45□□□□□ -0.74
CNOT9-202ENST00000295701 CDC45O75419 566 aa10.45□□□□□ -0.74
CNOT9-202ENST00000295701 PSMD10O75832 226 aa10.45□□□□□ -0.74
CNOT9-202ENST00000295701 TDP2O95551 362 aa10.45□□□□□ -0.74
CNOT9-202ENST00000295701 EOMESO95936 686 aa10.45□□□□□ -0.74
CNOT9-202ENST00000295701 HMGB1P09429 215 aaKnown RBP10.45□□□□□ -0.74
CNOT9-202ENST00000295701 EPCAMP16422 314 aa10.45□□□□□ -0.74
CNOT9-202ENST00000295701 HOXB8P17481 243 aaPredicted RBP10.45□□□□□ -0.74
CNOT9-202ENST00000295701 RPS6KB1P23443 525 aa10.45□□□□□ -0.74
CNOT9-202ENST00000295701 PDIA3P30101 505 aaKnown RBP10.45□□□□□ -0.74
CNOT9-202ENST00000295701 PPM1AP35813 382 aa10.45□□□□□ -0.74
CNOT9-202ENST00000295701 PHKA2P46019 1235 aa10.45□□□□□ -0.74
CNOT9-202ENST00000295701 NLRP5P59047 1200 aa10.45□□□□□ -0.74
CNOT9-202ENST00000295701 AKAP17AQ02040 695 aaKnown RBP10.45□□□□□ -0.74
CNOT9-202ENST00000295701 FOXC1Q12948 553 aa10.45□□□□□ -0.74
CNOT9-202ENST00000295701 SMC1AQ14683 1233 aaKnown RBP10.45□□□□□ -0.74
CNOT9-202ENST00000295701 LRCH2Q5VUJ6 765 aa10.45□□□□□ -0.74
CNOT9-202ENST00000295701 BLOC1S2Q6QNY1 142 aa10.45□□□□□ -0.74
CNOT9-202ENST00000295701 FAM43BQ6ZT52 329 aaPredicted RBP10.45□□□□□ -0.74
CNOT9-202ENST00000295701 MIER3Q7Z3K6 550 aa10.45□□□□□ -0.74
CNOT9-202ENST00000295701 VPS52Q8N1B4 723 aa10.45□□□□□ -0.74
CNOT9-202ENST00000295701 TBCKQ8TEA7 893 aa10.45□□□□□ -0.74
CNOT9-202ENST00000295701 CCDC12Q8WUD4 166 aaPredicted RBP10.45□□□□□ -0.74
CNOT9-202ENST00000295701 CASP10Q92851 521 aa10.45□□□□□ -0.74
CNOT9-202ENST00000295701 RIPOR3Q96MK2 946 aa10.45□□□□□ -0.74
CNOT9-202ENST00000295701 USB1Q9BQ65 265 aaKnown RBP10.45□□□□□ -0.74
CNOT9-202ENST00000295701 ADAM7Q9H2U9 754 aa10.45□□□□□ -0.74
CNOT9-202ENST00000295701 NRDE2Q9H7Z3 1164 aa10.45□□□□□ -0.74
CNOT9-202ENST00000295701 ZFHX2Q9C0A1 2572 aaPredicted RBP10.45□□□□□ -0.74
CNOT9-202ENST00000295701 NID2Q14112 1375 aa10.44□□□□□ -0.74
CNOT9-202ENST00000295701 IGKV6-21A0A0C4DH24 114 aa10.44□□□□□ -0.74
CNOT9-202ENST00000295701 FSD2A1L4K1 749 aa10.44□□□□□ -0.74
CNOT9-202ENST00000295701 ZC3H11AO75152 810 aaKnown RBP eCLIP10.44□□□□□ -0.74
CNOT9-202ENST00000295701 ZMYND10O75800 440 aa10.44□□□□□ -0.74
CNOT9-202ENST00000295701 GALTP07902 379 aa10.44□□□□□ -0.74
CNOT9-202ENST00000295701 SRGAP2BP0DMP2 458 aa10.44□□□□□ -0.74
CNOT9-202ENST00000295701 IFNAR1P17181 557 aa10.44□□□□□ -0.74
CNOT9-202ENST00000295701 HSPA4P34932 840 aa10.44□□□□□ -0.74
CNOT9-202ENST00000295701 ALDH7A1P49419 539 aaKnown RBP10.44□□□□□ -0.74
CNOT9-202ENST00000295701 USP11P51784 963 aa10.44□□□□□ -0.74
CNOT9-202ENST00000295701 AFF1P51825 1210 aaKnown RBP10.44□□□□□ -0.74
CNOT9-202ENST00000295701 TPRNQ4KMQ1 711 aa10.44□□□□□ -0.74
CNOT9-202ENST00000295701 PLA2G4FQ68DD2 849 aa10.44□□□□□ -0.74
CNOT9-202ENST00000295701 MCTP2Q6DN12 878 aa10.44□□□□□ -0.74
CNOT9-202ENST00000295701 B3GNT9Q6UX72 402 aa10.44□□□□□ -0.74
CNOT9-202ENST00000295701 BICD2Q8TD16 824 aa10.44□□□□□ -0.74
CNOT9-202ENST00000295701 SLC22A17Q8WUG5 538 aa10.44□□□□□ -0.74
CNOT9-202ENST00000295701 ATOH1Q92858 354 aaPredicted RBP10.44□□□□□ -0.74
CNOT9-202ENST00000295701 AIFM3Q96NN9 605 aa10.44□□□□□ -0.74
CNOT9-202ENST00000295701 RIT2Q99578 217 aa10.44□□□□□ -0.74
CNOT9-202ENST00000295701 VN1R3Q9BXE9 311 aa10.44□□□□□ -0.74
CNOT9-202ENST00000295701 RNF26Q9BY78 433 aaPredicted RBP10.44□□□□□ -0.74
CNOT9-202ENST00000295701 NIFKQ9BYG3 293 aaKnown RBP10.44□□□□□ -0.74
CNOT9-202ENST00000295701 AGXT2Q9BYV1 514 aa10.44□□□□□ -0.74
CNOT9-202ENST00000295701 GCOM2Q9BZD3 368 aaPredicted RBP10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms