RNA–Protein interactions for RNA: ENST00000295006.5

CAPN2-201, Transcript of calpain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN2, Length 3,573 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN2-201ENST00000295006 SKOR1P84550 965 aa16.59■□□□□ 0.25
CAPN2-201ENST00000295006 UAP1Q16222 522 aaPredicted RBP16.59■□□□□ 0.25
CAPN2-201ENST00000295006 PHLDB3Q6NSJ2 640 aa16.59■□□□□ 0.25
CAPN2-201ENST00000295006 FAM47EQ6ZV65 393 aa16.59■□□□□ 0.25
CAPN2-201ENST00000295006 ZNF720Q7Z2F6 126 aa16.59■□□□□ 0.25
CAPN2-201ENST00000295006 LDHDQ86WU2 507 aa16.59■□□□□ 0.25
CAPN2-201ENST00000295006 ARHGEF19Q8IW93 802 aa16.59■□□□□ 0.25
CAPN2-201ENST00000295006 XXYLT1Q8NBI6 393 aa16.59■□□□□ 0.25
CAPN2-201ENST00000295006 ATF5Q9Y2D1 282 aaPredicted RBP16.59■□□□□ 0.25
CAPN2-201ENST00000295006 PCDHA2Q9Y5H9 948 aa16.59■□□□□ 0.25
CAPN2-201ENST00000295006 ROBO1Q9Y6N7 1651 aa16.59■□□□□ 0.25
CAPN2-201ENST00000295006 RBAK-RBAKDNI3L0D1 243 aa16.59■□□□□ 0.25
CAPN2-201ENST00000295006 SHOX2O60902 331 aaPredicted RBP16.59■□□□□ 0.25
CAPN2-201ENST00000295006 CLK2P49760 499 aaKnown RBP16.59■□□□□ 0.25
CAPN2-201ENST00000295006 NAA25Q14CX7 972 aa16.59■□□□□ 0.25
CAPN2-201ENST00000295006 HAUS6Q7Z4H7 955 aa16.59■□□□□ 0.25
CAPN2-201ENST00000295006 PODNQ7Z5L7 613 aa16.59■□□□□ 0.25
CAPN2-201ENST00000295006 WDR18Q9BV38 432 aa16.59■□□□□ 0.25
CAPN2-201ENST00000295006 WDR11Q9BZH6 1224 aa16.59■□□□□ 0.25
CAPN2-201ENST00000295006 TTC7AQ9ULT0 858 aaPredicted RBP16.59■□□□□ 0.25
CAPN2-201ENST00000295006 LOC102724159A0A0B4J2E5 919 aa16.59■□□□□ 0.25
CAPN2-201ENST00000295006 ECEL1O95672 775 aa16.59■□□□□ 0.25
CAPN2-201ENST00000295006 STX2P32856 288 aa16.59■□□□□ 0.25
CAPN2-201ENST00000295006 PWP2Q15269 919 aaKnown RBP16.59■□□□□ 0.25
CAPN2-201ENST00000295006 HHIPL2Q6UWX4 724 aa16.59■□□□□ 0.25
CAPN2-201ENST00000295006 ZSWIM2Q8NEG5 633 aa16.59■□□□□ 0.25
CAPN2-201ENST00000295006 SCFD2Q8WU76 684 aa16.59■□□□□ 0.25
CAPN2-201ENST00000295006 PIK3R5Q8WYR1 880 aa16.59■□□□□ 0.25
CAPN2-201ENST00000295006 CHMP6Q96FZ7 201 aa16.59■□□□□ 0.25
CAPN2-201ENST00000295006 GJD4Q96KN9 370 aaPredicted RBP16.59■□□□□ 0.25
CAPN2-201ENST00000295006 ACCSQ96QU6 501 aa16.59■□□□□ 0.25
CAPN2-201ENST00000295006 TOPORSQ9NS56 1045 aaPredicted RBP16.59■□□□□ 0.25
CAPN2-201ENST00000295006 FAM198AQ9UFP1 575 aa16.59■□□□□ 0.25
CAPN2-201ENST00000295006 PASKQ96RG2 1323 aa16.59■□□□□ 0.25
CAPN2-201ENST00000295006 ZNF394Q53GI3 561 aa16.58■□□□□ 0.25
CAPN2-201ENST00000295006 OTOP1Q7RTM1 612 aa16.58■□□□□ 0.25
CAPN2-201ENST00000295006 SLC47A2Q86VL8 602 aa16.58■□□□□ 0.25
CAPN2-201ENST00000295006 NLGN1Q8N2Q7 840 aa16.58■□□□□ 0.25
CAPN2-201ENST00000295006 RUBCNQ92622 972 aa16.58■□□□□ 0.25
CAPN2-201ENST00000295006 DOT1LQ8TEK3 1739 aa16.58■□□□□ 0.24
CAPN2-201ENST00000295006 TMEM253P0C7T8 217 aa16.58■□□□□ 0.24
CAPN2-201ENST00000295006 SNCBQ16143 134 aa16.58■□□□□ 0.24
CAPN2-201ENST00000295006 SPATS2Q86XZ4 545 aaKnown RBP16.58■□□□□ 0.24
CAPN2-201ENST00000295006 CBWD2Q8IUF1 395 aa16.58■□□□□ 0.24
CAPN2-201ENST00000295006 RHOT2Q8IXI1 618 aa16.58■□□□□ 0.24
CAPN2-201ENST00000295006 CPA5Q8WXQ8 436 aa16.58■□□□□ 0.24
CAPN2-201ENST00000295006 KIFAP3Q92845 792 aa16.58■□□□□ 0.24
CAPN2-201ENST00000295006 ZNF341Q9BYN7 854 aa16.58■□□□□ 0.24
CAPN2-201ENST00000295006 QTRT2Q9H974 415 aaKnown RBP16.58■□□□□ 0.24
CAPN2-201ENST00000295006 RNF207Q6ZRF8 634 aa16.58■□□□□ 0.24
CAPN2-201ENST00000295006 KIRREL3Q8IZU9 778 aa16.58■□□□□ 0.24
CAPN2-201ENST00000295006 CCDC63Q8NA47 563 aa16.58■□□□□ 0.24
CAPN2-201ENST00000295006 CALR3Q96L12 384 aaKnown RBP16.58■□□□□ 0.24
CAPN2-201ENST00000295006 NT5C1BQ96P26 610 aa16.58■□□□□ 0.24
CAPN2-201ENST00000295006 XPO6Q96QU8 1125 aaKnown RBP16.58■□□□□ 0.24
CAPN2-201ENST00000295006 POTEJP0CG39 1038 aa16.57■□□□□ 0.24
CAPN2-201ENST00000295006 TRAF1Q13077 416 aa16.57■□□□□ 0.24
CAPN2-201ENST00000295006 SEPT14Q6ZU15 432 aa16.57■□□□□ 0.24
CAPN2-201ENST00000295006 TAOK1Q7L7X3 1001 aa16.57■□□□□ 0.24
CAPN2-201ENST00000295006 SRRM1Q8IYB3 904 aaKnown RBP16.57■□□□□ 0.24
CAPN2-201ENST00000295006 SLC40A1Q9NP59 571 aa16.57■□□□□ 0.24
CAPN2-201ENST00000295006 NKIRAS1Q9NYS0 192 aa16.57■□□□□ 0.24
CAPN2-201ENST00000295006 HSPBP1Q9NZL4 362 aa16.57■□□□□ 0.24
CAPN2-201ENST00000295006 ANKFY1Q9P2R3 1169 aa16.57■□□□□ 0.24
CAPN2-201ENST00000295006 SLC16A3O15427 465 aaKnown RBP16.57■□□□□ 0.24
CAPN2-201ENST00000295006 KRT15P19012 456 aa16.57■□□□□ 0.24
CAPN2-201ENST00000295006 INTS8Q75QN2 995 aaKnown RBP16.57■□□□□ 0.24
CAPN2-201ENST00000295006 RNF25Q96BH1 459 aaPredicted RBP16.57■□□□□ 0.24
CAPN2-201ENST00000295006 CEP170P1Q96L14 293 aa16.57■□□□□ 0.24
CAPN2-201ENST00000295006 C9orf72Q96LT7 481 aa16.57■□□□□ 0.24
CAPN2-201ENST00000295006 LBHD1Q9BQE6 289 aaPredicted RBP16.57■□□□□ 0.24
CAPN2-201ENST00000295006 CETN2P41208 172 aa16.57■□□□□ 0.24
CAPN2-201ENST00000295006 MFAP3P55082 362 aa16.57■□□□□ 0.24
CAPN2-201ENST00000295006 PPP3CAQ08209 521 aa16.57■□□□□ 0.24
CAPN2-201ENST00000295006 KYNUQ16719 465 aa16.57■□□□□ 0.24
CAPN2-201ENST00000295006 WDR44Q5JSH3 913 aa16.57■□□□□ 0.24
CAPN2-201ENST00000295006 CYFIP1Q7L576 1253 aa16.57■□□□□ 0.24
CAPN2-201ENST00000295006 LRRC34Q8IZ02 419 aa16.57■□□□□ 0.24
CAPN2-201ENST00000295006 LRRC57Q8N9N7 239 aa16.57■□□□□ 0.24
CAPN2-201ENST00000295006 TMEM39BQ9GZU3 492 aa16.57■□□□□ 0.24
CAPN2-201ENST00000295006 STK24Q9Y6E0 443 aa16.57■□□□□ 0.24
CAPN2-201ENST00000295006 MYO3BQ8WXR4 1341 aa16.57■□□□□ 0.24
CAPN2-201ENST00000295006 TCRBV7S2A1N4TA0A589 114 aa16.56■□□□□ 0.24
CAPN2-201ENST00000295006 POLRMTO00411 1230 aaKnown RBP16.56■□□□□ 0.24
CAPN2-201ENST00000295006 TBX3O15119 743 aa16.56■□□□□ 0.24
CAPN2-201ENST00000295006 PYGMP11217 842 aa16.56■□□□□ 0.24
CAPN2-201ENST00000295006 ARHGEF2Q92974 986 aaKnown RBP16.56■□□□□ 0.24
CAPN2-201ENST00000295006 PWWP2AQ96N64 755 aa16.56■□□□□ 0.24
CAPN2-201ENST00000295006 FAM213AQ9BRX8 229 aa16.56■□□□□ 0.24
CAPN2-201ENST00000295006 STMN4Q9H169 189 aaPredicted RBP16.56■□□□□ 0.24
CAPN2-201ENST00000295006 LRRC4CQ9HCJ2 640 aa16.56■□□□□ 0.24
CAPN2-201ENST00000295006 KMT5AQ9NQR1 393 aa16.56■□□□□ 0.24
CAPN2-201ENST00000295006 RWDD2BP57060 319 aa16.56■□□□□ 0.24
CAPN2-201ENST00000295006 JAG1P78504 1218 aa16.56■□□□□ 0.24
CAPN2-201ENST00000295006 MASTLQ96GX5 879 aa16.56■□□□□ 0.24
CAPN2-201ENST00000295006 C11orf70Q9BRQ4 267 aa16.56■□□□□ 0.24
CAPN2-201ENST00000295006 GLIS2Q9BZE0 524 aaPredicted RBP16.56■□□□□ 0.24
CAPN2-201ENST00000295006 VPS37BQ9H9H4 285 aa16.56■□□□□ 0.24
CAPN2-201ENST00000295006 HOMER3Q9NSC5 361 aa16.56■□□□□ 0.24
CAPN2-201ENST00000295006 DENND3A2RUS2 1198 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms