RNA–Protein interactions for RNA: ENST00000294008.3

SLX4-201, Transcript of SLX4 structure-specific endonuclease subunit, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SLX4, Length 7,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4-201ENST00000294008 DUX4L3P0CJ86 424 aa13.18□□□□□ -0.3
SLX4-201ENST00000294008 DUX4L4P0CJ87 422 aa13.18□□□□□ -0.3
SLX4-201ENST00000294008 DUX4L5P0CJ88 424 aa13.18□□□□□ -0.3
SLX4-201ENST00000294008 DUX4L6P0CJ89 424 aa13.18□□□□□ -0.3
SLX4-201ENST00000294008 DUX4L7P0CJ90 424 aa13.18□□□□□ -0.3
SLX4-201ENST00000294008 YWHAQP27348 245 aa13.18□□□□□ -0.3
SLX4-201ENST00000294008 TMEM206Q9H813 350 aa13.18□□□□□ -0.3
SLX4-201ENST00000294008 MLXIPLQ9NP71 852 aa13.18□□□□□ -0.3
SLX4-201ENST00000294008 ENTPD7Q9NQZ7 604 aa13.18□□□□□ -0.3
SLX4-201ENST00000294008 DUX4Q9UBX2 424 aa13.18□□□□□ -0.3
SLX4-201ENST00000294008 RNF123Q5XPI4 1314 aa13.18□□□□□ -0.3
SLX4-201ENST00000294008 SNUPNO95149 360 aaKnown RBP13.18□□□□□ -0.3
SLX4-201ENST00000294008 IMPACTQ9P2X3 320 aa13.18□□□□□ -0.3
SLX4-201ENST00000294008 UBE4BO95155 1302 aa13.18□□□□□ -0.3
SLX4-201ENST00000294008 CLDN3O15551 220 aa13.18□□□□□ -0.3
SLX4-201ENST00000294008 TNNI3P19429 210 aa13.18□□□□□ -0.3
SLX4-201ENST00000294008 HSD3B2P26439 372 aa13.18□□□□□ -0.3
SLX4-201ENST00000294008 CENPPQ6IPU0 288 aa13.18□□□□□ -0.3
SLX4-201ENST00000294008 TADA1Q96BN2 335 aa13.18□□□□□ -0.3
SLX4-201ENST00000294008 RPS6P62753 249 aaKnown RBP13.17□□□□□ -0.3
SLX4-201ENST00000294008 MRPS25P82663 173 aaKnown RBP13.17□□□□□ -0.3
SLX4-201ENST00000294008 RBBP4Q09028 425 aa13.17□□□□□ -0.3
SLX4-201ENST00000294008 LRRC24Q50LG9 513 aa13.17□□□□□ -0.3
SLX4-201ENST00000294008 RD3Q7Z3Z2 195 aa13.17□□□□□ -0.3
SLX4-201ENST00000294008 ZNF438Q7Z4V0 828 aa13.17□□□□□ -0.3
SLX4-201ENST00000294008 ZNF512Q96ME7 567 aaPredicted RBP13.17□□□□□ -0.3
SLX4-201ENST00000294008 TRIM62Q9BVG3 475 aa13.17□□□□□ -0.3
SLX4-201ENST00000294008 FAM217BQ9NTX9 383 aaPredicted RBP13.17□□□□□ -0.3
SLX4-201ENST00000294008 TRIM33Q9UPN9 1127 aa13.17□□□□□ -0.3
SLX4-201ENST00000294008 GYG2O15488 501 aa13.17□□□□□ -0.3
SLX4-201ENST00000294008 ETFBP38117 255 aa13.17□□□□□ -0.3
SLX4-201ENST00000294008 LAMC2Q13753 1193 aa13.17□□□□□ -0.3
SLX4-201ENST00000294008 CYTH1Q15438 398 aa13.17□□□□□ -0.3
SLX4-201ENST00000294008 MGAT5BQ3V5L5 792 aa13.17□□□□□ -0.3
SLX4-201ENST00000294008 SLFN12LQ6IEE8 588 aa13.17□□□□□ -0.3
SLX4-201ENST00000294008 G2E3Q7L622 706 aa13.17□□□□□ -0.3
SLX4-201ENST00000294008 FAM162AQ96A26 154 aa13.17□□□□□ -0.3
SLX4-201ENST00000294008 AGAP3Q96P47 875 aa13.17□□□□□ -0.3
SLX4-201ENST00000294008 WRNIP1Q96S55 665 aa13.17□□□□□ -0.3
SLX4-201ENST00000294008 C17orf80Q9BSJ5 609 aa13.17□□□□□ -0.3
SLX4-201ENST00000294008 ZNF804BA4D1E1 1349 aa13.17□□□□□ -0.3
SLX4-201ENST00000294008 MXI1P50539 228 aa13.17□□□□□ -0.3
SLX4-201ENST00000294008 BFSP2Q13515 415 aa13.17□□□□□ -0.3
SLX4-201ENST00000294008 HORMAD1Q86X24 394 aa13.17□□□□□ -0.3
SLX4-201ENST00000294008 USP44Q9H0E7 712 aa13.17□□□□□ -0.3
SLX4-201ENST00000294008 DYRK3O43781 588 aa13.17□□□□□ -0.3
SLX4-201ENST00000294008 RALBP11234 206 aa13.17□□□□□ -0.3
SLX4-201ENST00000294008 HOXC9P31274 260 aa13.17□□□□□ -0.3
SLX4-201ENST00000294008 PHKA2P46019 1235 aa13.17□□□□□ -0.3
SLX4-201ENST00000294008 MIER2Q8N344 545 aa13.17□□□□□ -0.3
SLX4-201ENST00000294008 ELMO2Q96JJ3 720 aa13.17□□□□□ -0.3
SLX4-201ENST00000294008 PIGSQ96S52 555 aa13.17□□□□□ -0.3
SLX4-201ENST00000294008 DHX35Q9H5Z1 703 aaKnown RBP13.17□□□□□ -0.3
SLX4-201ENST00000294008 TNNQ9UQP3 1299 aa13.17□□□□□ -0.3
SLX4-201ENST00000294008 ERN1O75460 977 aaKnown RBP13.17□□□□□ -0.3
SLX4-201ENST00000294008 IGFBP4P22692 258 aa13.17□□□□□ -0.3
SLX4-201ENST00000294008 WEE1P30291 646 aa13.17□□□□□ -0.3
SLX4-201ENST00000294008 ZNF555Q8NEP9 628 aa13.17□□□□□ -0.3
SLX4-201ENST00000294008 PIGOQ8TEQ8 1089 aa13.17□□□□□ -0.3
SLX4-201ENST00000294008 DCTN4Q9UJW0 460 aa13.17□□□□□ -0.3
SLX4-201ENST00000294008 SURF1Q15526 300 aa13.17□□□□□ -0.3
SLX4-201ENST00000294008 MTERF3Q96E29 417 aa13.17□□□□□ -0.3
SLX4-201ENST00000294008 PDE11AQ9HCR9 933 aa13.17□□□□□ -0.3
SLX4-201ENST00000294008 CD274Q9NZQ7 290 aa13.17□□□□□ -0.3
SLX4-201ENST00000294008 NOVA2Q9UNW9 492 aaKnown RBP13.17□□□□□ -0.3
SLX4-201ENST00000294008 A8MXQ7 604 aa13.16□□□□□ -0.3
SLX4-201ENST00000294008 NUDT14O95848 222 aa13.16□□□□□ -0.3
SLX4-201ENST00000294008 GAP43P17677 238 aa13.16□□□□□ -0.3
SLX4-201ENST00000294008 CSNK2BP67870 215 aa13.16□□□□□ -0.3
SLX4-201ENST00000294008 TMEM62Q0P6H9 643 aa13.16□□□□□ -0.3
SLX4-201ENST00000294008 PPM1NQ8N819 430 aa13.16□□□□□ -0.3
SLX4-201ENST00000294008 CUEDC2Q9H467 287 aa13.16□□□□□ -0.3
SLX4-201ENST00000294008 TTLL13PA6NNM8 815 aa13.16□□□□□ -0.3
SLX4-201ENST00000294008 H0Y626 953 aa13.16□□□□□ -0.3
SLX4-201ENST00000294008 TRIM16O95361 564 aa13.16□□□□□ -0.3
SLX4-201ENST00000294008 ALOX15P16050 662 aaPredicted RBP13.16□□□□□ -0.3
SLX4-201ENST00000294008 KRT20P35900 424 aa13.16□□□□□ -0.3
SLX4-201ENST00000294008 CACNB3P54284 484 aa13.16□□□□□ -0.3
SLX4-201ENST00000294008 EYA1Q99502 592 aa13.16□□□□□ -0.3
SLX4-201ENST00000294008 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.16□□□□□ -0.3
SLX4-201ENST00000294008 FGD5Q6ZNL6 1462 aa13.16□□□□□ -0.3
SLX4-201ENST00000294008 TJP3O95049 919 aa13.16□□□□□ -0.3
SLX4-201ENST00000294008 HAUS6Q7Z4H7 955 aa13.16□□□□□ -0.3
SLX4-201ENST00000294008 SH3TC2Q8TF17 1288 aa13.16□□□□□ -0.3
SLX4-201ENST00000294008 SPATA33Q96N06 139 aa13.16□□□□□ -0.3
SLX4-201ENST00000294008 SATB2Q9UPW6 733 aa13.16□□□□□ -0.3
SLX4-201ENST00000294008 POTEFA5A3E0 1075 aa13.16□□□□□ -0.3
SLX4-201ENST00000294008 LRRC14BA6NHZ5 514 aa13.16□□□□□ -0.3
SLX4-201ENST00000294008 NLRP11P59045 1033 aaKnown RBP13.16□□□□□ -0.3
SLX4-201ENST00000294008 NLGN1Q8N2Q7 840 aa13.16□□□□□ -0.3
SLX4-201ENST00000294008 INTS4Q96HW7 963 aaKnown RBP13.16□□□□□ -0.3
SLX4-201ENST00000294008 CASKIN1Q8WXD9 1431 aa13.16□□□□□ -0.3
SLX4-201ENST00000294008 TCP1P17987 556 aaKnown RBP13.16□□□□□ -0.3
SLX4-201ENST00000294008 SERPINB3P29508 390 aa13.16□□□□□ -0.3
SLX4-201ENST00000294008 MLH1P40692 756 aa13.16□□□□□ -0.3
SLX4-201ENST00000294008 DYNLL1P63167 89 aaKnown RBP13.16□□□□□ -0.3
SLX4-201ENST00000294008 CNGA2Q16280 664 aa13.16□□□□□ -0.3
SLX4-201ENST00000294008 EFHC2Q5JST6 749 aa13.16□□□□□ -0.3
SLX4-201ENST00000294008 FAM47EQ6ZV65 393 aa13.16□□□□□ -0.3
SLX4-201ENST00000294008 CLEC4FQ8N1N0 589 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms