RNA–Protein interactions for RNA: ENST00000293889.10

CCDC78-201, Transcript of coiled-coil domain containing 78, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC78, Length 1,611 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-201ENST00000293889 C7orf61Q8IZ16 206 aa19.52■□□□□ 0.72
CCDC78-201ENST00000293889 FAM200AQ8TCP9 573 aa19.52■□□□□ 0.72
CCDC78-201ENST00000293889 TOX2Q96NM4 488 aa19.52■□□□□ 0.72
CCDC78-201ENST00000293889 CCDC113Q9H0I3 377 aa19.52■□□□□ 0.72
CCDC78-201ENST00000293889 MINDY3Q9H8M7 445 aa19.52■□□□□ 0.72
CCDC78-201ENST00000293889 PCDH10Q9P2E7 1040 aa19.52■□□□□ 0.72
CCDC78-201ENST00000293889 GINS2Q9Y248 185 aa19.52■□□□□ 0.72
CCDC78-201ENST00000293889 ZMYM2Q9UBW7 1377 aa19.52■□□□□ 0.72
CCDC78-201ENST00000293889 MROH7Q68CQ1 1323 aa19.52■□□□□ 0.71
CCDC78-201ENST00000293889 TRIM49BA6NDI0 452 aa19.51■□□□□ 0.71
CCDC78-201ENST00000293889 EVI5O60447 810 aa19.51■□□□□ 0.71
CCDC78-201ENST00000293889 THPOP40225 353 aa19.51■□□□□ 0.71
CCDC78-201ENST00000293889 MRPS6P82932 125 aaKnown RBP19.51■□□□□ 0.71
CCDC78-201ENST00000293889 MBTD1Q05BQ5 628 aa19.51■□□□□ 0.71
CCDC78-201ENST00000293889 FAAP100Q0VG06 881 aa19.51■□□□□ 0.71
CCDC78-201ENST00000293889 IQCB1Q15051 598 aa19.51■□□□□ 0.71
CCDC78-201ENST00000293889 TRIM71Q2Q1W2 868 aaKnown RBP19.51■□□□□ 0.71
CCDC78-201ENST00000293889 ANKRD40Q6AI12 368 aa19.51■□□□□ 0.71
CCDC78-201ENST00000293889 MAP4K3Q8IVH8 894 aa19.51■□□□□ 0.71
CCDC78-201ENST00000293889 ZNF710Q8N1W2 664 aa19.51■□□□□ 0.71
CCDC78-201ENST00000293889 TMEM206Q9H813 350 aa19.51■□□□□ 0.71
CCDC78-201ENST00000293889 PHLPP2Q6ZVD8 1323 aa19.51■□□□□ 0.71
CCDC78-201ENST00000293889 INO80B-WBP1J3KQ70 363 aa19.51■□□□□ 0.71
CCDC78-201ENST00000293889 TGFB1I1O43294 461 aa19.51■□□□□ 0.71
CCDC78-201ENST00000293889 RRP9O43818 475 aaKnown RBP19.51■□□□□ 0.71
CCDC78-201ENST00000293889 CSDE1O75534 798 aaKnown RBP19.51■□□□□ 0.71
CCDC78-201ENST00000293889 RPLP2P05387 115 aaKnown RBP19.51■□□□□ 0.71
CCDC78-201ENST00000293889 IQCF3P0C7M6 154 aa19.51■□□□□ 0.71
CCDC78-201ENST00000293889 STRN3Q13033 797 aa19.51■□□□□ 0.71
CCDC78-201ENST00000293889 ZCWPW2Q504Y3 356 aa19.51■□□□□ 0.71
CCDC78-201ENST00000293889 TTI2Q6NXR4 508 aa19.51■□□□□ 0.71
CCDC78-201ENST00000293889 DHX40Q8IX18 779 aaKnown RBP19.51■□□□□ 0.71
CCDC78-201ENST00000293889 SYCP3Q8IZU3 236 aa19.51■□□□□ 0.71
CCDC78-201ENST00000293889 AOPEPQ8N6M6 819 aa19.51■□□□□ 0.71
CCDC78-201ENST00000293889 OSMRQ99650 979 aa19.51■□□□□ 0.71
CCDC78-201ENST00000293889 CELF4Q9BZC1 486 aaKnown RBP19.51■□□□□ 0.71
CCDC78-201ENST00000293889 GCOM2Q9BZD3 368 aaPredicted RBP19.51■□□□□ 0.71
CCDC78-201ENST00000293889 INO80BQ9C086 356 aaPredicted RBP19.51■□□□□ 0.71
CCDC78-201ENST00000293889 USP20Q9Y2K6 914 aa19.51■□□□□ 0.71
CCDC78-201ENST00000293889 LTBP2Q14767 1821 aa19.5■□□□□ 0.71
CCDC78-201ENST00000293889 DCDC2CA8MYV0 355 aa19.5■□□□□ 0.71
CCDC78-201ENST00000293889 ADCY5O95622 1261 aa19.5■□□□□ 0.71
CCDC78-201ENST00000293889 TPM3P06753 285 aa19.5■□□□□ 0.71
CCDC78-201ENST00000293889 CTSHP09668 335 aa19.5■□□□□ 0.71
CCDC78-201ENST00000293889 CRYBB1P53674 252 aaPredicted RBP19.5■□□□□ 0.71
CCDC78-201ENST00000293889 SRGAP1Q7Z6B7 1085 aa19.5■□□□□ 0.71
CCDC78-201ENST00000293889 LUZP1Q86V48 1076 aa19.5■□□□□ 0.71
CCDC78-201ENST00000293889 ENOX1Q8TC92 643 aaKnown RBP19.5■□□□□ 0.71
CCDC78-201ENST00000293889 FZD8Q9H461 694 aa19.5■□□□□ 0.71
CCDC78-201ENST00000293889 EXOC7Q9UPT5 735 aa19.5■□□□□ 0.71
CCDC78-201ENST00000293889 TRPV2Q9Y5S1 764 aa19.5■□□□□ 0.71
CCDC78-201ENST00000293889 CDY2AQ9Y6F7 541 aa19.5■□□□□ 0.71
CCDC78-201ENST00000293889 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP19.5■□□□□ 0.71
CCDC78-201ENST00000293889 BICDL2A1A5D9 508 aa19.49■□□□□ 0.71
CCDC78-201ENST00000293889 PDXKO00764 312 aa19.49■□□□□ 0.71
CCDC78-201ENST00000293889 CHRNA1P02708 482 aa19.49■□□□□ 0.71
CCDC78-201ENST00000293889 EDN1P05305 212 aa19.49■□□□□ 0.71
CCDC78-201ENST00000293889 PRKCBP05771 671 aa19.49■□□□□ 0.71
CCDC78-201ENST00000293889 DARSP14868 501 aaKnown RBP19.49■□□□□ 0.71
CCDC78-201ENST00000293889 MYL5Q02045 173 aa19.49■□□□□ 0.71
CCDC78-201ENST00000293889 MGAT3Q09327 533 aa19.49■□□□□ 0.71
CCDC78-201ENST00000293889 MAPK6Q16659 721 aa19.49■□□□□ 0.71
CCDC78-201ENST00000293889 DUSP9Q99956 384 aaKnown RBP19.49■□□□□ 0.71
CCDC78-201ENST00000293889 GBP3Q9H0R5 595 aa19.49■□□□□ 0.71
CCDC78-201ENST00000293889 TYW1Q9NV66 732 aaKnown RBP19.49■□□□□ 0.71
CCDC78-201ENST00000293889 SIP14410 1827 aa19.49■□□□□ 0.71
CCDC78-201ENST00000293889 CEP290O15078 2479 aa19.48■□□□□ 0.71
CCDC78-201ENST00000293889 TTLL13PA6NNM8 815 aa19.48■□□□□ 0.71
CCDC78-201ENST00000293889 TISP43B9A030 160 aa19.48■□□□□ 0.71
CCDC78-201ENST00000293889 M0QZ92 97 aa19.48■□□□□ 0.71
CCDC78-201ENST00000293889 IKBKBO14920 756 aa19.48■□□□□ 0.71
CCDC78-201ENST00000293889 CLTBP09497 229 aa19.48■□□□□ 0.71
CCDC78-201ENST00000293889 EIF4BP23588 611 aaKnown RBP19.48■□□□□ 0.71
CCDC78-201ENST00000293889 LRRC63Q05C16 580 aa19.48■□□□□ 0.71
CCDC78-201ENST00000293889 NCAPHQ15003 741 aa19.48■□□□□ 0.71
CCDC78-201ENST00000293889 TMEM40Q8WWA1 233 aa19.48■□□□□ 0.71
CCDC78-201ENST00000293889 TSG101Q99816 390 aa19.48■□□□□ 0.71
CCDC78-201ENST00000293889 TRAF3IP3Q9Y228 551 aa19.48■□□□□ 0.71
CCDC78-201ENST00000293889 TRIM43BA6NCK2 446 aa19.47■□□□□ 0.71
CCDC78-201ENST00000293889 ANKRD63C9JTQ0 380 aa19.47■□□□□ 0.71
CCDC78-201ENST00000293889 ACKR2O00590 384 aa19.47■□□□□ 0.71
CCDC78-201ENST00000293889 TLR3O15455 904 aaKnown RBP19.47■□□□□ 0.71
CCDC78-201ENST00000293889 B4GALT5O43286 388 aa19.47■□□□□ 0.71
CCDC78-201ENST00000293889 CAND2O75155 1236 aa19.47■□□□□ 0.71
CCDC78-201ENST00000293889 CKBP12277 381 aa19.47■□□□□ 0.71
CCDC78-201ENST00000293889 AMHR2Q16671 573 aa19.47■□□□□ 0.71
CCDC78-201ENST00000293889 FAM187BQ17R55 369 aa19.47■□□□□ 0.71
CCDC78-201ENST00000293889 FAM26DQ5JW98 314 aa19.47■□□□□ 0.71
CCDC78-201ENST00000293889 SPATA1Q5VX52 437 aa19.47■□□□□ 0.71
CCDC78-201ENST00000293889 SLC39A4Q6P5W5 647 aa19.47■□□□□ 0.71
CCDC78-201ENST00000293889 FOXR2Q6PJQ5 311 aa19.47■□□□□ 0.71
CCDC78-201ENST00000293889 TRIM43Q96BQ3 446 aaPredicted RBP19.47■□□□□ 0.71
CCDC78-201ENST00000293889 BICD1Q96G01 975 aa19.47■□□□□ 0.71
CCDC78-201ENST00000293889 TARS2Q9BW92 718 aaKnown RBP19.47■□□□□ 0.71
CCDC78-201ENST00000293889 MRPL4Q9BYD3 311 aaKnown RBP19.47■□□□□ 0.71
CCDC78-201ENST00000293889 AGPAT3Q9NRZ7 376 aa19.47■□□□□ 0.71
CCDC78-201ENST00000293889 PRMT7Q9NVM4 692 aaPredicted RBP19.47■□□□□ 0.71
CCDC78-201ENST00000293889 TBX21Q9UL17 535 aa19.47■□□□□ 0.71
CCDC78-201ENST00000293889 SMTNL1A8MU46 457 aa19.47■□□□□ 0.71
CCDC78-201ENST00000293889 BECN2A8MW95 431 aa19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms