RNA–Protein interactions for RNA: ENST00000293880.9

SSRP1-202, Transcript of structure specific recognition protein 1, humanhuman

TSL 2

Gene SSRP1, Length 6,296 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-202ENST00000293880 ZNF341Q9BYN7 854 aa17.13■□□□□ 0.33
SSRP1-202ENST00000293880 LCP1P13796 627 aa17.13■□□□□ 0.33
SSRP1-202ENST00000293880 FAM83BQ5T0W9 1011 aa17.13■□□□□ 0.33
SSRP1-202ENST00000293880 TTC25Q96NG3 672 aa17.13■□□□□ 0.33
SSRP1-202ENST00000293880 KLC4Q9NSK0 619 aa17.13■□□□□ 0.33
SSRP1-202ENST00000293880 NIPSNAP3AQ9UFN0 247 aaPredicted RBP17.13■□□□□ 0.33
SSRP1-202ENST00000293880 GPC3P51654 580 aa17.12■□□□□ 0.33
SSRP1-202ENST00000293880 HEATR4Q86WZ0 1026 aa17.12■□□□□ 0.33
SSRP1-202ENST00000293880 RAVER2Q9HCJ3 691 aaKnown RBP17.12■□□□□ 0.33
SSRP1-202ENST00000293880 SMARCAL1Q9NZC9 954 aa17.12■□□□□ 0.33
SSRP1-202ENST00000293880 ZBTB1Q9Y2K1 713 aa17.12■□□□□ 0.33
SSRP1-202ENST00000293880 TMEM247A6NEH6 219 aa17.12■□□□□ 0.33
SSRP1-202ENST00000293880 GRK2P25098 689 aa17.12■□□□□ 0.33
SSRP1-202ENST00000293880 PAPOLAP51003 745 aaKnown RBP17.12■□□□□ 0.33
SSRP1-202ENST00000293880 LZICQ8WZA0 190 aa17.12■□□□□ 0.33
SSRP1-202ENST00000293880 SNF8Q96H20 258 aa17.12■□□□□ 0.33
SSRP1-202ENST00000293880 POTEB3A0JP26 581 aa17.12■□□□□ 0.33
SSRP1-202ENST00000293880 POTECB2RU33 542 aa17.12■□□□□ 0.33
SSRP1-202ENST00000293880 K7ERI5 159 aa17.12■□□□□ 0.33
SSRP1-202ENST00000293880 ADCY3O60266 1144 aa17.12■□□□□ 0.33
SSRP1-202ENST00000293880 KRT17Q04695 432 aa17.12■□□□□ 0.33
SSRP1-202ENST00000293880 SEPT2Q15019 361 aa17.12■□□□□ 0.33
SSRP1-202ENST00000293880 FASTKD1Q53R41 847 aaKnown RBP17.12■□□□□ 0.33
SSRP1-202ENST00000293880 POTEBQ6S5H4 581 aa17.12■□□□□ 0.33
SSRP1-202ENST00000293880 FAM118BQ9BPY3 351 aa17.12■□□□□ 0.33
SSRP1-202ENST00000293880 NPHS2Q9NP85 383 aa17.12■□□□□ 0.33
SSRP1-202ENST00000293880 MID2Q9UJV3 735 aa17.12■□□□□ 0.33
SSRP1-202ENST00000293880 CUL4AQ13619 759 aa17.12■□□□□ 0.33
SSRP1-202ENST00000293880 KLHL38Q2WGJ6 581 aa17.12■□□□□ 0.33
SSRP1-202ENST00000293880 FLAD1Q8NFF5 587 aa17.12■□□□□ 0.33
SSRP1-202ENST00000293880 TTC8Q8TAM2 541 aa17.12■□□□□ 0.33
SSRP1-202ENST00000293880 PYGLP06737 847 aa17.12■□□□□ 0.33
SSRP1-202ENST00000293880 GCFC2P16383 781 aaKnown RBP17.12■□□□□ 0.33
SSRP1-202ENST00000293880 LMBRD2Q68DH5 695 aaPredicted RBP17.12■□□□□ 0.33
SSRP1-202ENST00000293880 ZNF467Q7Z7K2 595 aaPredicted RBP17.12■□□□□ 0.33
SSRP1-202ENST00000293880 NDFIP2Q9NV92 336 aa17.12■□□□□ 0.33
SSRP1-202ENST00000293880 TMA7Q9Y2S6 64 aaKnown RBP17.12■□□□□ 0.33
SSRP1-202ENST00000293880 TRIM66O15016 1216 aa17.11■□□□□ 0.33
SSRP1-202ENST00000293880 IL17RAQ96F46 866 aa17.11■□□□□ 0.33
SSRP1-202ENST00000293880 SH3GL1Q99961 368 aa17.11■□□□□ 0.33
SSRP1-202ENST00000293880 BRIP1Q9BX63 1249 aa17.11■□□□□ 0.33
SSRP1-202ENST00000293880 SLITRK6Q9H5Y7 841 aa17.11■□□□□ 0.33
SSRP1-202ENST00000293880 ATP9BO43861 1147 aa17.11■□□□□ 0.33
SSRP1-202ENST00000293880 PCP11498 1178 aaKnown RBP17.11■□□□□ 0.33
SSRP1-202ENST00000293880 DMPKQ09013 629 aa17.11■□□□□ 0.33
SSRP1-202ENST00000293880 KCNH2Q12809 1159 aa17.11■□□□□ 0.33
SSRP1-202ENST00000293880 LONRF1Q17RB8 773 aa17.11■□□□□ 0.33
SSRP1-202ENST00000293880 KIAA1755Q5JYT7 1200 aa17.11■□□□□ 0.33
SSRP1-202ENST00000293880 CCDC137Q6PK04 289 aaKnown RBP17.11■□□□□ 0.33
SSRP1-202ENST00000293880 SH2D3CQ8N5H7 860 aa17.11■□□□□ 0.33
SSRP1-202ENST00000293880 TMA16Q96EY4 203 aaKnown RBP17.11■□□□□ 0.33
SSRP1-202ENST00000293880 ATP6V1G3Q96LB4 118 aa17.11■□□□□ 0.33
SSRP1-202ENST00000293880 DBR1Q9UK59 544 aaKnown RBP17.11■□□□□ 0.33
SSRP1-202ENST00000293880 LOC102724428A0A0B4J2F2 783 aa17.11■□□□□ 0.33
SSRP1-202ENST00000293880 LGALS16A8MUM7 142 aa17.11■□□□□ 0.33
SSRP1-202ENST00000293880 USP14P54578 494 aa17.11■□□□□ 0.33
SSRP1-202ENST00000293880 SIK1P57059 783 aa17.11■□□□□ 0.33
SSRP1-202ENST00000293880 ANKRD40Q6AI12 368 aa17.11■□□□□ 0.33
SSRP1-202ENST00000293880 FAM196AQ6ZSG2 479 aa17.11■□□□□ 0.33
SSRP1-202ENST00000293880 ASNSD1Q9NWL6 643 aa17.11■□□□□ 0.33
SSRP1-202ENST00000293880 DIS3Q9Y2L1 958 aaKnown RBP17.11■□□□□ 0.33
SSRP1-202ENST00000293880 OCM2P0CE71 109 aa17.11■□□□□ 0.33
SSRP1-202ENST00000293880 OCMP0CE72 109 aaPredicted RBP17.11■□□□□ 0.33
SSRP1-202ENST00000293880 BTKQ06187 659 aa17.11■□□□□ 0.33
SSRP1-202ENST00000293880 HIF1AQ16665 826 aa17.11■□□□□ 0.33
SSRP1-202ENST00000293880 ARMCX2Q7L311 632 aa17.11■□□□□ 0.33
SSRP1-202ENST00000293880 COPRSQ9NQ92 184 aa17.11■□□□□ 0.33
SSRP1-202ENST00000293880 POTEFA5A3E0 1075 aa17.11■□□□□ 0.33
SSRP1-202ENST00000293880 FTLP02792 175 aaPredicted RBP17.11■□□□□ 0.33
SSRP1-202ENST00000293880 POTEIP0CG38 1075 aa17.11■□□□□ 0.33
SSRP1-202ENST00000293880 GNA15P30679 374 aa17.11■□□□□ 0.33
SSRP1-202ENST00000293880 POTEGQ6S5H5 508 aa17.11■□□□□ 0.33
SSRP1-202ENST00000293880 POTEEQ6S8J3 1075 aa17.11■□□□□ 0.33
SSRP1-202ENST00000293880 CYGBQ8WWM9 190 aa17.11■□□□□ 0.33
SSRP1-202ENST00000293880 WDR17Q8IZU2 1322 aa17.11■□□□□ 0.33
SSRP1-202ENST00000293880 USP17L15C9J2P7 530 aa17.1■□□□□ 0.33
SSRP1-202ENST00000293880 USP17L13C9JLJ4 530 aa17.1■□□□□ 0.33
SSRP1-202ENST00000293880 USP17L11C9JVI0 530 aa17.1■□□□□ 0.33
SSRP1-202ENST00000293880 USP17L18D6R9N7 530 aa17.1■□□□□ 0.33
SSRP1-202ENST00000293880 USP17L22D6RA61 530 aa17.1■□□□□ 0.33
SSRP1-202ENST00000293880 USP17L17D6RBQ6 530 aa17.1■□□□□ 0.33
SSRP1-202ENST00000293880 USP17L19D6RCP7 530 aa17.1■□□□□ 0.33
SSRP1-202ENST00000293880 USP17L20D6RJB6 530 aa17.1■□□□□ 0.33
SSRP1-202ENST00000293880 TCN1P20061 433 aaPredicted RBP17.1■□□□□ 0.33
SSRP1-202ENST00000293880 USP17L24Q0WX57 530 aa17.1■□□□□ 0.33
SSRP1-202ENST00000293880 RASGRF1Q13972 1273 aa17.1■□□□□ 0.33
SSRP1-202ENST00000293880 USP17L6PQ6QN14 398 aa17.1■□□□□ 0.33
SSRP1-202ENST00000293880 MEFVO15553 781 aaPredicted RBP17.1■□□□□ 0.33
SSRP1-202ENST00000293880 FCER1AP12319 257 aa17.1■□□□□ 0.33
SSRP1-202ENST00000293880 KRT4P19013 534 aa17.1■□□□□ 0.33
SSRP1-202ENST00000293880 ARMCX6Q7L4S7 300 aa17.1■□□□□ 0.33
SSRP1-202ENST00000293880 CYFIP1Q7L576 1253 aa17.1■□□□□ 0.33
SSRP1-202ENST00000293880 HPS3Q969F9 1004 aa17.1■□□□□ 0.33
SSRP1-202ENST00000293880 ULK4Q96C45 1275 aa17.1■□□□□ 0.33
SSRP1-202ENST00000293880 ZNF667Q5HYK9 610 aa17.1■□□□□ 0.33
SSRP1-202ENST00000293880 FAM81BQ96LP2 452 aa17.1■□□□□ 0.33
SSRP1-202ENST00000293880 TRIM10Q9UDY6 481 aa17.1■□□□□ 0.33
SSRP1-202ENST00000293880 SRP68Q9UHB9 627 aaKnown RBP17.1■□□□□ 0.33
SSRP1-202ENST00000293880 IZUMO3Q5VZ72 239 aa17.1■□□□□ 0.33
SSRP1-202ENST00000293880 UNC13DQ70J99 1090 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms