RNA–Protein interactions for RNA: ENST00000293748.9

SYNGAP1-201, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 4,556 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-201ENST00000293748 LRGUKQ96M69 825 aa12.71□□□□□ -0.37
SYNGAP1-201ENST00000293748 MORF4L1Q9UBU8 362 aa12.71□□□□□ -0.37
SYNGAP1-201ENST00000293748 FTCDO95954 541 aa12.71□□□□□ -0.38
SYNGAP1-201ENST00000293748 CXCR5P32302 372 aa12.71□□□□□ -0.38
SYNGAP1-201ENST00000293748 KIF11P52732 1056 aa12.71□□□□□ -0.38
SYNGAP1-201ENST00000293748 MFAP3P55082 362 aa12.71□□□□□ -0.38
SYNGAP1-201ENST00000293748 PPP2R5CQ13362 524 aa12.71□□□□□ -0.38
SYNGAP1-201ENST00000293748 ARMCX5Q6P1M9 558 aa12.71□□□□□ -0.38
SYNGAP1-201ENST00000293748 RIOX2Q8IUF8 465 aa12.71□□□□□ -0.38
SYNGAP1-201ENST00000293748 DNAJC5GQ8N7S2 189 aa12.71□□□□□ -0.38
SYNGAP1-201ENST00000293748 DEPTORQ8TB45 409 aa12.71□□□□□ -0.38
SYNGAP1-201ENST00000293748 GJA10Q969M2 543 aa12.71□□□□□ -0.38
SYNGAP1-201ENST00000293748 AZI2Q9H6S1 392 aa12.71□□□□□ -0.38
SYNGAP1-201ENST00000293748 ANAPC5Q9UJX4 755 aa12.71□□□□□ -0.38
SYNGAP1-201ENST00000293748 PTPN22Q9Y2R2 807 aa12.71□□□□□ -0.38
SYNGAP1-201ENST00000293748 PCDHA13Q9Y5I0 950 aa12.71□□□□□ -0.38
SYNGAP1-201ENST00000293748 POLR2AP24928 1970 aaKnown RBP12.71□□□□□ -0.38
SYNGAP1-201ENST00000293748 ECM29Q5VYK3 1845 aa12.71□□□□□ -0.38
SYNGAP1-201ENST00000293748 K7ENM7 598 aa12.71□□□□□ -0.38
SYNGAP1-201ENST00000293748 POLR2MP0CAP2 368 aa12.71□□□□□ -0.38
SYNGAP1-201ENST00000293748 MMEL1Q495T6 779 aa12.71□□□□□ -0.38
SYNGAP1-201ENST00000293748 GPAT2Q6NUI2 795 aa12.71□□□□□ -0.38
SYNGAP1-201ENST00000293748 NLRX1Q86UT6 975 aa12.71□□□□□ -0.38
SYNGAP1-201ENST00000293748 FBXO28Q9NVF7 368 aa12.71□□□□□ -0.38
SYNGAP1-201ENST00000293748 BAG5Q9UL15 447 aa12.71□□□□□ -0.38
SYNGAP1-201ENST00000293748 PCDHA1Q9Y5I3 950 aa12.71□□□□□ -0.38
SYNGAP1-201ENST00000293748 MYH7P12883 1935 aa12.7□□□□□ -0.38
SYNGAP1-201ENST00000293748 MAPK13O15264 365 aa12.7□□□□□ -0.38
SYNGAP1-201ENST00000293748 ATP5HO75947 161 aa12.7□□□□□ -0.38
SYNGAP1-201ENST00000293748 FOSP01100 380 aaPredicted RBP12.7□□□□□ -0.38
SYNGAP1-201ENST00000293748 LBX2Q6XYB7 198 aa12.7□□□□□ -0.38
SYNGAP1-201ENST00000293748 TBC1D1Q86TI0 1168 aaPredicted RBP12.7□□□□□ -0.38
SYNGAP1-201ENST00000293748 PLA2G4DQ86XP0 818 aa12.7□□□□□ -0.38
SYNGAP1-201ENST00000293748 PDZD8Q8NEN9 1154 aa12.7□□□□□ -0.38
SYNGAP1-201ENST00000293748 FAM81BQ96LP2 452 aa12.7□□□□□ -0.38
SYNGAP1-201ENST00000293748 NT5C1BQ96P26 610 aa12.7□□□□□ -0.38
SYNGAP1-201ENST00000293748 BPIFA3Q9BQP9 254 aa12.7□□□□□ -0.38
SYNGAP1-201ENST00000293748 CFHR5Q9BXR6 569 aa12.7□□□□□ -0.38
SYNGAP1-201ENST00000293748 ZMYND12Q9H0C1 365 aa12.7□□□□□ -0.38
SYNGAP1-201ENST00000293748 IL17RBQ9NRM6 502 aa12.7□□□□□ -0.38
SYNGAP1-201ENST00000293748 PNMA6FA0A0J9YX94 578 aa12.7□□□□□ -0.38
SYNGAP1-201ENST00000293748 NOP56O00567 594 aaKnown RBP12.7□□□□□ -0.38
SYNGAP1-201ENST00000293748 ZBTB5O15062 677 aa12.7□□□□□ -0.38
SYNGAP1-201ENST00000293748 SMARCA1P28370 1054 aa12.7□□□□□ -0.38
SYNGAP1-201ENST00000293748 PDE1BQ01064 536 aa12.7□□□□□ -0.38
SYNGAP1-201ENST00000293748 MYL7Q01449 175 aa12.7□□□□□ -0.38
SYNGAP1-201ENST00000293748 FBXO46Q6PJ61 603 aaPredicted RBP12.7□□□□□ -0.38
SYNGAP1-201ENST00000293748 ST13P4Q8IZP2 240 aaPredicted RBP12.7□□□□□ -0.38
SYNGAP1-201ENST00000293748 GPKOWQ92917 476 aaPredicted RBP eCLIP12.7□□□□□ -0.38
SYNGAP1-201ENST00000293748 XAB2Q9HCS7 855 aaKnown RBP12.7□□□□□ -0.38
SYNGAP1-201ENST00000293748 MX2P20592 715 aa12.7□□□□□ -0.38
SYNGAP1-201ENST00000293748 MSH2P43246 934 aa12.7□□□□□ -0.38
SYNGAP1-201ENST00000293748 PHEXP78562 749 aa12.7□□□□□ -0.38
SYNGAP1-201ENST00000293748 SGMS1Q86VZ5 419 aa12.7□□□□□ -0.38
SYNGAP1-201ENST00000293748 TRIM50Q86XT4 487 aa12.7□□□□□ -0.38
SYNGAP1-201ENST00000293748 CENPKQ9BS16 269 aa12.7□□□□□ -0.38
SYNGAP1-201ENST00000293748 ADCY3O60266 1144 aa12.69□□□□□ -0.38
SYNGAP1-201ENST00000293748 GAP43P17677 238 aa12.69□□□□□ -0.38
SYNGAP1-201ENST00000293748 CYP27A1Q02318 531 aa12.69□□□□□ -0.38
SYNGAP1-201ENST00000293748 RNF207Q6ZRF8 634 aa12.69□□□□□ -0.38
SYNGAP1-201ENST00000293748 UIMC1Q96RL1 719 aa12.69□□□□□ -0.38
SYNGAP1-201ENST00000293748 SRRDQ9UH36 339 aa12.69□□□□□ -0.38
SYNGAP1-201ENST00000293748 NFU1Q9UMS0 254 aa12.69□□□□□ -0.38
SYNGAP1-201ENST00000293748 MAD1L1Q9Y6D9 718 aa12.69□□□□□ -0.38
SYNGAP1-201ENST00000293748 DCTN3O75935 186 aa12.69□□□□□ -0.38
SYNGAP1-201ENST00000293748 LARGE1O95461 756 aa12.69□□□□□ -0.38
SYNGAP1-201ENST00000293748 ICAM1P05362 532 aa12.69□□□□□ -0.38
SYNGAP1-201ENST00000293748 ESRRAP11474 423 aaPredicted RBP12.69□□□□□ -0.38
SYNGAP1-201ENST00000293748 PSMC2P35998 433 aaKnown RBP12.69□□□□□ -0.38
SYNGAP1-201ENST00000293748 ARID5BQ14865 1188 aa12.69□□□□□ -0.38
SYNGAP1-201ENST00000293748 TMED2Q15363 201 aa12.69□□□□□ -0.38
SYNGAP1-201ENST00000293748 RINT1Q6NUQ1 792 aa12.69□□□□□ -0.38
SYNGAP1-201ENST00000293748 C17orf99Q6UX52 265 aa12.69□□□□□ -0.38
SYNGAP1-201ENST00000293748 SAMD3Q8N6K7 520 aa12.69□□□□□ -0.38
SYNGAP1-201ENST00000293748 ZNF653Q96CK0 615 aa12.69□□□□□ -0.38
SYNGAP1-201ENST00000293748 PTPN18Q99952 460 aa12.69□□□□□ -0.38
SYNGAP1-201ENST00000293748 MOV10L1Q9BXT6 1211 aaKnown RBP12.69□□□□□ -0.38
SYNGAP1-201ENST00000293748 IFT122Q9HBG6 1241 aa12.69□□□□□ -0.38
SYNGAP1-201ENST00000293748 LY9Q9HBG7 655 aa12.69□□□□□ -0.38
SYNGAP1-201ENST00000293748 PCDHA4Q9UN74 947 aa12.69□□□□□ -0.38
SYNGAP1-201ENST00000293748 MT-ND3P03897 115 aa12.69□□□□□ -0.38
SYNGAP1-201ENST00000293748 GCFC2P16383 781 aaKnown RBP12.69□□□□□ -0.38
SYNGAP1-201ENST00000293748 LIG4P49917 911 aa12.69□□□□□ -0.38
SYNGAP1-201ENST00000293748 EVX2Q03828 476 aa12.69□□□□□ -0.38
SYNGAP1-201ENST00000293748 PSMD2Q13200 908 aa12.69□□□□□ -0.38
SYNGAP1-201ENST00000293748 SHROOM1Q2M3G4 852 aaPredicted RBP12.69□□□□□ -0.38
SYNGAP1-201ENST00000293748 NUGGCQ68CJ6 796 aa12.69□□□□□ -0.38
SYNGAP1-201ENST00000293748 JADE1Q6IE81 842 aa12.69□□□□□ -0.38
SYNGAP1-201ENST00000293748 SCYL1Q96KG9 808 aa12.69□□□□□ -0.38
SYNGAP1-201ENST00000293748 APBA2Q99767 749 aa12.69□□□□□ -0.38
SYNGAP1-201ENST00000293748 GYS2P54840 703 aa12.69□□□□□ -0.38
SYNGAP1-201ENST00000293748 DR1Q01658 176 aa12.69□□□□□ -0.38
SYNGAP1-201ENST00000293748 DEUP1Q05D60 604 aa12.69□□□□□ -0.38
SYNGAP1-201ENST00000293748 KRT31Q15323 416 aa12.69□□□□□ -0.38
SYNGAP1-201ENST00000293748 PTPN21Q16825 1174 aa12.69□□□□□ -0.38
SYNGAP1-201ENST00000293748 GPR142Q7Z601 462 aa12.69□□□□□ -0.38
SYNGAP1-201ENST00000293748 FAM186BQ8IYM0 893 aa12.69□□□□□ -0.38
SYNGAP1-201ENST00000293748 GRAMD1CQ8IYS0 662 aa12.69□□□□□ -0.38
SYNGAP1-201ENST00000293748 NKX2-3Q8TAU0 364 aa12.69□□□□□ -0.38
SYNGAP1-201ENST00000293748 TTLL3Q9Y4R7 772 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms