RNA–Protein interactions for RNA: ENST00000290330.7

SNF8-201, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SNF8, Length 951 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-201ENST00000290330 ASAP3Q8TDY4 903 aa11.64□□□□□ -0.55
SNF8-201ENST00000290330 PGBD4Q96DM1 585 aa11.64□□□□□ -0.55
SNF8-201ENST00000290330 CCDC43Q96MW1 224 aaKnown RBP11.64□□□□□ -0.55
SNF8-201ENST00000290330 CDCA3Q99618 268 aaPredicted RBP11.64□□□□□ -0.55
SNF8-201ENST00000290330 NRDE2Q9H7Z3 1164 aa11.64□□□□□ -0.55
SNF8-201ENST00000290330 TUFT1Q9NNX1 390 aa11.64□□□□□ -0.55
SNF8-201ENST00000290330 NGRNQ9NPE2 291 aaKnown RBP11.64□□□□□ -0.55
SNF8-201ENST00000290330 ENTPD7Q9NQZ7 604 aa11.64□□□□□ -0.55
SNF8-201ENST00000290330 TBC1D13Q9NVG8 400 aa11.64□□□□□ -0.55
SNF8-201ENST00000290330 BARX2Q9UMQ3 279 aaPredicted RBP11.64□□□□□ -0.55
SNF8-201ENST00000290330 INPP5FQ9Y2H2 1132 aa11.64□□□□□ -0.55
SNF8-201ENST00000290330 FSD2A1L4K1 749 aa11.63□□□□□ -0.55
SNF8-201ENST00000290330 INO80B-WBP1J3KQ70 363 aa11.63□□□□□ -0.55
SNF8-201ENST00000290330 TSPAN1O60635 241 aa11.63□□□□□ -0.55
SNF8-201ENST00000290330 USO1O60763 962 aaKnown RBP11.63□□□□□ -0.55
SNF8-201ENST00000290330 ZC3H11AO75152 810 aaKnown RBP eCLIP11.63□□□□□ -0.55
SNF8-201ENST00000290330 ERLIN2O94905 339 aa11.63□□□□□ -0.55
SNF8-201ENST00000290330 GALTP07902 379 aa11.63□□□□□ -0.55
SNF8-201ENST00000290330 COL9A1P20849 921 aa11.63□□□□□ -0.55
SNF8-201ENST00000290330 GLRA2P23416 452 aa11.63□□□□□ -0.55
SNF8-201ENST00000290330 U2AF2P26368 475 aaKnown RBP eCLIP11.63□□□□□ -0.558e-7■□□□□ 10.3
SNF8-201ENST00000290330 RPA1P27694 616 aa11.63□□□□□ -0.55
SNF8-201ENST00000290330 AFF1P51825 1210 aaKnown RBP11.63□□□□□ -0.55
SNF8-201ENST00000290330 GNL2Q13823 731 aaKnown RBP11.63□□□□□ -0.55
SNF8-201ENST00000290330 TMEM184AQ6ZMB5 413 aa11.63□□□□□ -0.55
SNF8-201ENST00000290330 TMC7Q7Z402 723 aa11.63□□□□□ -0.55
SNF8-201ENST00000290330 TMEM173Q86WV6 379 aaPredicted RBP11.63□□□□□ -0.55
SNF8-201ENST00000290330 C4orf32Q8N8J7 132 aa11.63□□□□□ -0.55
SNF8-201ENST00000290330 MRPL43Q8N983 215 aaKnown RBP11.63□□□□□ -0.55
SNF8-201ENST00000290330 TMEM169Q96HH4 297 aa11.63□□□□□ -0.55
SNF8-201ENST00000290330 TBC1D32Q96NH3 1257 aa11.63□□□□□ -0.55
SNF8-201ENST00000290330 NACC1Q96RE7 527 aa11.63□□□□□ -0.55
SNF8-201ENST00000290330 POLR3CQ9BUI4 534 aaPredicted RBP11.63□□□□□ -0.55
SNF8-201ENST00000290330 NFKBIZQ9BYH8 718 aa11.63□□□□□ -0.55
SNF8-201ENST00000290330 RSAD1Q9HA92 442 aa11.63□□□□□ -0.55
SNF8-201ENST00000290330 DBR1Q9UK59 544 aaKnown RBP11.63□□□□□ -0.55
SNF8-201ENST00000290330 CARNS1A5YM72 827 aa11.62□□□□□ -0.55
SNF8-201ENST00000290330 ST18O60284 1047 aa11.62□□□□□ -0.55
SNF8-201ENST00000290330 B4GALT3O60512 393 aa11.62□□□□□ -0.55
SNF8-201ENST00000290330 NCLP19338 710 aaKnown RBP11.62□□□□□ -0.55
SNF8-201ENST00000290330 AXLP30530 894 aa11.62□□□□□ -0.55
SNF8-201ENST00000290330 TOB1P50616 345 aaPredicted RBP11.62□□□□□ -0.55
SNF8-201ENST00000290330 RNASELQ05823 741 aaKnown RBP11.62□□□□□ -0.55
SNF8-201ENST00000290330 MBTD1Q05BQ5 628 aa11.62□□□□□ -0.55
SNF8-201ENST00000290330 NBR1Q14596 966 aa11.62□□□□□ -0.55
SNF8-201ENST00000290330 AMHR2Q16671 573 aa11.62□□□□□ -0.55
SNF8-201ENST00000290330 MAEAQ7L5Y9 396 aa11.62□□□□□ -0.55
SNF8-201ENST00000290330 ZNF280BQ86YH2 543 aa11.62□□□□□ -0.55
SNF8-201ENST00000290330 SMG8Q8ND04 991 aaKnown RBP11.62□□□□□ -0.55
SNF8-201ENST00000290330 CNNM3Q8NE01 707 aa11.62□□□□□ -0.55
SNF8-201ENST00000290330 ERMNQ8TAM6 284 aa11.62□□□□□ -0.55
SNF8-201ENST00000290330 IGSF21Q96ID5 467 aa11.62□□□□□ -0.55
SNF8-201ENST00000290330 CPB2Q96IY4 423 aa11.62□□□□□ -0.55
SNF8-201ENST00000290330 LRFN3Q9BTN0 628 aa11.62□□□□□ -0.55
SNF8-201ENST00000290330 EIF2AQ9BY44 585 aaKnown RBP11.62□□□□□ -0.55
SNF8-201ENST00000290330 POLR3FQ9H1D9 316 aaPredicted RBP11.62□□□□□ -0.55
SNF8-201ENST00000290330 C11orf16Q9NQ32 467 aa11.62□□□□□ -0.55
SNF8-201ENST00000290330 GPRC5CQ9NQ84 441 aa11.62□□□□□ -0.55
SNF8-201ENST00000290330 KANSL3Q9P2N6 904 aa11.62□□□□□ -0.55
SNF8-201ENST00000290330 DNAJB4Q9UDY4 337 aa11.62□□□□□ -0.55
SNF8-201ENST00000290330 NOL7Q9UMY1 257 aaKnown RBP11.62□□□□□ -0.55
SNF8-201ENST00000290330 CNTNAP2Q9UHC6 1331 aa11.61□□□□□ -0.55
SNF8-201ENST00000290330 ARID2Q68CP9 1835 aa11.61□□□□□ -0.55
SNF8-201ENST00000290330 C2orf71A6NGG8 1288 aa11.61□□□□□ -0.55
SNF8-201ENST00000290330 B4GALT5O43286 388 aa11.61□□□□□ -0.55
SNF8-201ENST00000290330 GPR37L1O60883 481 aa11.61□□□□□ -0.55
SNF8-201ENST00000290330 DDHD2O94830 711 aa11.61□□□□□ -0.55
SNF8-201ENST00000290330 ALADP13716 330 aa11.61□□□□□ -0.55
SNF8-201ENST00000290330 ARF4P18085 180 aaPredicted RBP11.61□□□□□ -0.55
SNF8-201ENST00000290330 MUTP22033 750 aa11.61□□□□□ -0.55
SNF8-201ENST00000290330 SLC11A1P49279 550 aa11.61□□□□□ -0.55
SNF8-201ENST00000290330 FXR2P51116 673 aaKnown RBP eCLIP11.61□□□□□ -0.55
SNF8-201ENST00000290330 NCBP1Q09161 790 aaKnown RBP11.61□□□□□ -0.55
SNF8-201ENST00000290330 SMC1AQ14683 1233 aaKnown RBP11.61□□□□□ -0.55
SNF8-201ENST00000290330 TMEM31Q5JXX7 168 aa11.61□□□□□ -0.55
SNF8-201ENST00000290330 NOTUMQ6P988 496 aa11.61□□□□□ -0.55
SNF8-201ENST00000290330 POTEGQ6S5H5 508 aa11.61□□□□□ -0.55
SNF8-201ENST00000290330 DDX53Q86TM3 631 aaKnown RBP11.61□□□□□ -0.55
SNF8-201ENST00000290330 VPS52Q8N1B4 723 aa11.61□□□□□ -0.55
SNF8-201ENST00000290330 MCPH1Q8NEM0 835 aa11.61□□□□□ -0.55
SNF8-201ENST00000290330 URGCPQ8TCY9 931 aa11.61□□□□□ -0.55
SNF8-201ENST00000290330 BCL7CQ8WUZ0 217 aaPredicted RBP11.61□□□□□ -0.55
SNF8-201ENST00000290330 CCDC51Q96ER9 411 aa11.61□□□□□ -0.55
SNF8-201ENST00000290330 TMX3Q96JJ7 454 aa11.61□□□□□ -0.55
SNF8-201ENST00000290330 POP1Q99575 1024 aaKnown RBP11.61□□□□□ -0.55
SNF8-201ENST00000290330 GBP3Q9H0R5 595 aa11.61□□□□□ -0.55
SNF8-201ENST00000290330 ZBP1Q9H171 429 aa11.61□□□□□ -0.55
SNF8-201ENST00000290330 CSRNP2Q9H175 543 aa11.61□□□□□ -0.55
SNF8-201ENST00000290330 UBN1Q9NPG3 1134 aa11.61□□□□□ -0.55
SNF8-201ENST00000290330 USP15Q9Y4E8 981 aaPredicted RBP11.61□□□□□ -0.55
SNF8-201ENST00000290330 IPPQ9Y573 584 aa11.61□□□□□ -0.55
SNF8-201ENST00000290330 PCDHB6Q9Y5E3 794 aa11.61□□□□□ -0.55
SNF8-201ENST00000290330 A0A1B0GUA9 196 aa11.6□□□□□ -0.55
SNF8-201ENST00000290330 LRRIQ4A6NIV6 560 aa11.6□□□□□ -0.55
SNF8-201ENST00000290330 INPPL1O15357 1258 aa11.6□□□□□ -0.55
SNF8-201ENST00000290330 CD2BP2O95400 341 aaKnown RBP11.6□□□□□ -0.55
SNF8-201ENST00000290330 CXCL14O95715 111 aa11.6□□□□□ -0.55
SNF8-201ENST00000290330 POMCP01189 267 aa11.6□□□□□ -0.55
SNF8-201ENST00000290330 ALDH2P05091 517 aa11.6□□□□□ -0.55
SNF8-201ENST00000290330 SRGAP2BP0DMP2 458 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms