RNA–Protein interactions for RNA: ENST00000289292.11

SHROOM4-201, Transcript of shroom family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHROOM4, Length 6,261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-201ENST00000289292 AP2B1P63010 937 aa16.33■□□□□ 0.21
SHROOM4-201ENST00000289292 LRRN4CLQ8ND94 238 aa16.33■□□□□ 0.21
SHROOM4-201ENST00000289292 IGDCC4Q8TDY8 1250 aa16.33■□□□□ 0.21
SHROOM4-201ENST00000289292 RBM41Q96IZ5 413 aaKnown RBP16.33■□□□□ 0.21
SHROOM4-201ENST00000289292 HECW2Q9P2P5 1572 aa16.33■□□□□ 0.2
SHROOM4-201ENST00000289292 CFAP73A6NFT4 308 aa16.33■□□□□ 0.2
SHROOM4-201ENST00000289292 FAM187AA6NFU0 413 aa16.33■□□□□ 0.2
SHROOM4-201ENST00000289292 CYP26A1O43174 497 aa16.33■□□□□ 0.2
SHROOM4-201ENST00000289292 PDCD2Q16342 344 aaPredicted RBP16.33■□□□□ 0.2
SHROOM4-201ENST00000289292 SGMS1Q86VZ5 419 aa16.33■□□□□ 0.2
SHROOM4-201ENST00000289292 RASSF3Q86WH2 238 aa16.33■□□□□ 0.2
SHROOM4-201ENST00000289292 TMEM94Q12767 1356 aa16.33■□□□□ 0.2
SHROOM4-201ENST00000289292 DNAJC8O75937 253 aaPredicted RBP16.33■□□□□ 0.2
SHROOM4-201ENST00000289292 LRRC31Q6UY01 552 aa16.33■□□□□ 0.2
SHROOM4-201ENST00000289292 MDM1Q8TC05 714 aa16.33■□□□□ 0.2
SHROOM4-201ENST00000289292 CELF1Q92879 486 aaKnown RBP16.33■□□□□ 0.2
SHROOM4-201ENST00000289292 FHOD1Q9Y613 1164 aa16.33■□□□□ 0.2
SHROOM4-201ENST00000289292 CNGA1P29973 690 aa16.33■□□□□ 0.2
SHROOM4-201ENST00000289292 DYNC1I2Q13409 638 aaKnown RBP16.33■□□□□ 0.2
SHROOM4-201ENST00000289292 RWDD4Q6NW29 188 aaKnown RBP16.33■□□□□ 0.2
SHROOM4-201ENST00000289292 RPS6KC1Q96S38 1066 aa16.33■□□□□ 0.2
SHROOM4-201ENST00000289292 WNT8AQ9H1J5 351 aa16.33■□□□□ 0.2
SHROOM4-201ENST00000289292 VIPAS39Q9H9C1 493 aa16.33■□□□□ 0.2
SHROOM4-201ENST00000289292 USP42Q9H9J4 1324 aaKnown RBP16.32■□□□□ 0.2
SHROOM4-201ENST00000289292 PLEKP08567 350 aaPredicted RBP16.32■□□□□ 0.2
SHROOM4-201ENST00000289292 ARSEP51690 589 aa16.32■□□□□ 0.2
SHROOM4-201ENST00000289292 GRAPQ13588 217 aa16.32■□□□□ 0.2
SHROOM4-201ENST00000289292 MTMR1Q13613 665 aa16.32■□□□□ 0.2
SHROOM4-201ENST00000289292 KLHL38Q2WGJ6 581 aa16.32■□□□□ 0.2
SHROOM4-201ENST00000289292 ADSSL1Q8N142 457 aa16.32■□□□□ 0.2
SHROOM4-201ENST00000289292 GRAPLQ8TC17 118 aaPredicted RBP16.32■□□□□ 0.2
SHROOM4-201ENST00000289292 RFFLQ8WZ73 363 aa16.32■□□□□ 0.2
SHROOM4-201ENST00000289292 CHORDC1Q9UHD1 332 aaPredicted RBP16.32■□□□□ 0.2
SHROOM4-201ENST00000289292 ITIH6Q6UXX5 1313 aa16.32■□□□□ 0.2
SHROOM4-201ENST00000289292 CRB1P82279 1406 aa16.32■□□□□ 0.2
SHROOM4-201ENST00000289292 GNA15P30679 374 aa16.32■□□□□ 0.2
SHROOM4-201ENST00000289292 HNRNPH1P31943 449 aaKnown RBP16.32■□□□□ 0.2
SHROOM4-201ENST00000289292 GUF1Q8N442 669 aaKnown RBP16.32■□□□□ 0.2
SHROOM4-201ENST00000289292 CCDC124Q96CT7 223 aaKnown RBP16.32■□□□□ 0.2
SHROOM4-201ENST00000289292 ZNF341Q9BYN7 854 aa16.32■□□□□ 0.2
SHROOM4-201ENST00000289292 TUBE1Q9UJT0 475 aa16.32■□□□□ 0.2
SHROOM4-201ENST00000289292 MCF2P10911 925 aa16.32■□□□□ 0.2
SHROOM4-201ENST00000289292 KDSRQ06136 332 aa16.32■□□□□ 0.2
SHROOM4-201ENST00000289292 RSRC2Q7L4I2 434 aaKnown RBP16.32■□□□□ 0.2
SHROOM4-201ENST00000289292 CYFIP2Q96F07 1278 aa16.32■□□□□ 0.2
SHROOM4-201ENST00000289292 AGPAT1Q99943 283 aa16.32■□□□□ 0.2
SHROOM4-201ENST00000289292 EIF2AK1Q9BQI3 630 aaKnown RBP16.32■□□□□ 0.2
SHROOM4-201ENST00000289292 NDE1Q9NXR1 346 aa16.32■□□□□ 0.2
SHROOM4-201ENST00000289292 DENND3A2RUS2 1198 aa16.32■□□□□ 0.2
SHROOM4-201ENST00000289292 IRAK1P51617 712 aa16.32■□□□□ 0.2
SHROOM4-201ENST00000289292 NSUN2Q08J23 767 aaKnown RBP eCLIP16.32■□□□□ 0.2
SHROOM4-201ENST00000289292 LRRC4Q9HBW1 653 aa16.32■□□□□ 0.2
SHROOM4-201ENST00000289292 RAVER2Q9HCJ3 691 aaKnown RBP16.32■□□□□ 0.2
SHROOM4-201ENST00000289292 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.32■□□□□ 0.2
SHROOM4-201ENST00000289292 UBE4BO95155 1302 aa16.31■□□□□ 0.2
SHROOM4-201ENST00000289292 CLDN3O15551 220 aa16.31■□□□□ 0.2
SHROOM4-201ENST00000289292 CAV1Q03135 178 aa16.31■□□□□ 0.2
SHROOM4-201ENST00000289292 AP3B2Q13367 1082 aa16.31■□□□□ 0.2
SHROOM4-201ENST00000289292 SIX6OS1Q8N1H7 587 aa16.31■□□□□ 0.2
SHROOM4-201ENST00000289292 TTC25Q96NG3 672 aa16.31■□□□□ 0.2
SHROOM4-201ENST00000289292 SLC40A1Q9NP59 571 aa16.31■□□□□ 0.2
SHROOM4-201ENST00000289292 ATXN8OSP0DMR3 200 aa16.31■□□□□ 0.2
SHROOM4-201ENST00000289292 DCAF15Q66K64 600 aa16.31■□□□□ 0.2
SHROOM4-201ENST00000289292 OR6B3Q8NGW1 331 aa16.31■□□□□ 0.2
SHROOM4-201ENST00000289292 ADA2Q9NZK5 511 aa16.31■□□□□ 0.2
SHROOM4-201ENST00000289292 ARPP19P56211 112 aa16.31■□□□□ 0.2
SHROOM4-201ENST00000289292 ALCAMQ13740 583 aa16.31■□□□□ 0.2
SHROOM4-201ENST00000289292 C4orf33Q8N1A6 199 aa16.31■□□□□ 0.2
SHROOM4-201ENST00000289292 TRIM9Q9C026 710 aa16.31■□□□□ 0.2
SHROOM4-201ENST00000289292 CACYBPQ9HB71 228 aaKnown RBP16.31■□□□□ 0.2
SHROOM4-201ENST00000289292 NCAPD2Q15021 1401 aa16.31■□□□□ 0.2
SHROOM4-201ENST00000289292 ATMINO43313 823 aaPredicted RBP16.31■□□□□ 0.2
SHROOM4-201ENST00000289292 KCNJ6P48051 423 aa16.31■□□□□ 0.2
SHROOM4-201ENST00000289292 STK4Q13043 487 aa16.31■□□□□ 0.2
SHROOM4-201ENST00000289292 MTM1Q13496 603 aa16.31■□□□□ 0.2
SHROOM4-201ENST00000289292 KCNB1Q14721 858 aa16.31■□□□□ 0.2
SHROOM4-201ENST00000289292 NAALADL2Q58DX5 795 aa16.31■□□□□ 0.2
SHROOM4-201ENST00000289292 KIAA1755Q5JYT7 1200 aa16.31■□□□□ 0.2
SHROOM4-201ENST00000289292 SH2D3AQ9BRG2 576 aa16.31■□□□□ 0.2
SHROOM4-201ENST00000289292 ALKQ9UM73 1620 aa16.3■□□□□ 0.2
SHROOM4-201ENST00000289292 NUDCD3Q8IVD9 361 aa16.3■□□□□ 0.2
SHROOM4-201ENST00000289292 DCAF4Q8WV16 495 aa16.3■□□□□ 0.2
SHROOM4-201ENST00000289292 CSPG5O95196 566 aa16.3■□□□□ 0.2
SHROOM4-201ENST00000289292 HNRNPCP07910 306 aaKnown RBP eCLIP16.3■□□□□ 0.2
SHROOM4-201ENST00000289292 DHX34Q14147 1143 aaKnown RBP16.3■□□□□ 0.2
SHROOM4-201ENST00000289292 RHPN2Q8IUC4 686 aa16.3■□□□□ 0.2
SHROOM4-201ENST00000289292 RGL1Q9NZL6 768 aa16.3■□□□□ 0.2
SHROOM4-201ENST00000289292 TSR3Q9UJK0 312 aaKnown RBP16.3■□□□□ 0.2
SHROOM4-201ENST00000289292 NCOA3Q9Y6Q9 1424 aa16.3■□□□□ 0.2
SHROOM4-201ENST00000289292 PFDN6O15212 129 aa16.3■□□□□ 0.2
SHROOM4-201ENST00000289292 ERVK-24P63145 666 aa16.3■□□□□ 0.2
SHROOM4-201ENST00000289292 CUL3Q13618 768 aa16.3■□□□□ 0.2
SHROOM4-201ENST00000289292 ALX1Q15699 326 aa16.3■□□□□ 0.2
SHROOM4-201ENST00000289292 CPA5Q8WXQ8 436 aa16.3■□□□□ 0.2
SHROOM4-201ENST00000289292 RAPGEF5Q92565 580 aa16.3■□□□□ 0.2
SHROOM4-201ENST00000289292 ATXN3P54252 364 aaPredicted RBP16.3■□□□□ 0.2
SHROOM4-201ENST00000289292 COPS2P61201 443 aa16.3■□□□□ 0.2
SHROOM4-201ENST00000289292 SLC18A3Q16572 532 aa16.3■□□□□ 0.2
SHROOM4-201ENST00000289292 PPP1R2P3Q6NXS1 205 aa16.3■□□□□ 0.2
SHROOM4-201ENST00000289292 UPF3AQ9H1J1 476 aaKnown RBP16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms