RNA–Protein interactions for RNA: ENST00000289272.2

PCDHA13-201, Transcript of protocadherin alpha 13, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHA13, Length 5,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13-201ENST00000289272 MRPS25P82663 173 aaKnown RBP18.65■□□□□ 0.58
PCDHA13-201ENST00000289272 HIC1Q14526 733 aa18.65■□□□□ 0.58
PCDHA13-201ENST00000289272 INTUQ9ULD6 942 aa18.65■□□□□ 0.58
PCDHA13-201ENST00000289272 GUCY1A2P33402 732 aa18.65■□□□□ 0.58
PCDHA13-201ENST00000289272 POTEAQ6S8J7 498 aa18.65■□□□□ 0.58
PCDHA13-201ENST00000289272 RGS9BPQ6ZS82 235 aa18.65■□□□□ 0.58
PCDHA13-201ENST00000289272 RAD54LQ92698 747 aa18.65■□□□□ 0.58
PCDHA13-201ENST00000289272 PRMT1Q99873 361 aaKnown RBP18.65■□□□□ 0.58
PCDHA13-201ENST00000289272 KCNA4P22459 653 aa18.65■□□□□ 0.58
PCDHA13-201ENST00000289272 PGM1P36871 562 aa18.65■□□□□ 0.58
PCDHA13-201ENST00000289272 AARSP49588 968 aaKnown RBP eCLIP18.65■□□□□ 0.58
PCDHA13-201ENST00000289272 PAPD7Q5XG87 772 aaKnown RBP18.65■□□□□ 0.58
PCDHA13-201ENST00000289272 TTC16Q8NEE8 873 aa18.65■□□□□ 0.58
PCDHA13-201ENST00000289272 AP5M1Q9H0R1 490 aa18.65■□□□□ 0.58
PCDHA13-201ENST00000289272 ITGB1BP2Q9UKP3 347 aa18.65■□□□□ 0.58
PCDHA13-201ENST00000289272 TCP11X1B4DZS4 312 aa18.65■□□□□ 0.58
PCDHA13-201ENST00000289272 PHF2O75151 1096 aa18.65■□□□□ 0.58
PCDHA13-201ENST00000289272 NCF2P19878 526 aaPredicted RBP18.65■□□□□ 0.58
PCDHA13-201ENST00000289272 DPYDQ12882 1025 aa18.65■□□□□ 0.58
PCDHA13-201ENST00000289272 MAPRE2Q15555 327 aa18.65■□□□□ 0.58
PCDHA13-201ENST00000289272 NAALADL2Q58DX5 795 aa18.65■□□□□ 0.58
PCDHA13-201ENST00000289272 FRMD5Q7Z6J6 570 aa18.65■□□□□ 0.58
PCDHA13-201ENST00000289272 POMGNT1Q8WZA1 660 aa18.65■□□□□ 0.58
PCDHA13-201ENST00000289272 MTO1Q9Y2Z2 717 aaKnown RBP18.65■□□□□ 0.58
PCDHA13-201ENST00000289272 PCDHB4Q9Y5E5 795 aa18.65■□□□□ 0.58
PCDHA13-201ENST00000289272 NOP14P78316 857 aaKnown RBP18.64■□□□□ 0.57
PCDHA13-201ENST00000289272 SWT1Q5T5J6 900 aaKnown RBP18.64■□□□□ 0.57
PCDHA13-201ENST00000289272 RANBP17Q9H2T7 1088 aaKnown RBP18.64■□□□□ 0.57
PCDHA13-201ENST00000289272 CHCHD3Q9NX63 227 aaKnown RBP18.64■□□□□ 0.57
PCDHA13-201ENST00000289272 BARHL2Q9NY43 387 aa18.64■□□□□ 0.57
PCDHA13-201ENST00000289272 SALL3Q9BXA9 1300 aa18.64■□□□□ 0.57
PCDHA13-201ENST00000289272 ESYT3A0FGR9 886 aa18.64■□□□□ 0.57
PCDHA13-201ENST00000289272 ARHGEF37A1IGU5 675 aa18.64■□□□□ 0.57
PCDHA13-201ENST00000289272 FSBPO95073 299 aa18.64■□□□□ 0.57
PCDHA13-201ENST00000289272 NEK2P51955 445 aa18.64■□□□□ 0.57
PCDHA13-201ENST00000289272 SURF1Q15526 300 aa18.64■□□□□ 0.57
PCDHA13-201ENST00000289272 CCDC137Q6PK04 289 aaKnown RBP18.64■□□□□ 0.57
PCDHA13-201ENST00000289272 RASSF3Q86WH2 238 aa18.64■□□□□ 0.57
PCDHA13-201ENST00000289272 RNPC3Q96LT9 517 aaKnown RBP18.64■□□□□ 0.57
PCDHA13-201ENST00000289272 DNAJC12Q9UKB3 198 aa18.64■□□□□ 0.57
PCDHA13-201ENST00000289272 ARHGAP26Q9UNA1 814 aa18.64■□□□□ 0.57
PCDHA13-201ENST00000289272 ENO4A6NNW6 628 aa18.64■□□□□ 0.57
PCDHA13-201ENST00000289272 USP17L5A8MUK1 530 aa18.64■□□□□ 0.57
PCDHA13-201ENST00000289272 EEF1B2P24534 225 aaKnown RBP18.64■□□□□ 0.57
PCDHA13-201ENST00000289272 UBXN2AP68543 259 aa18.64■□□□□ 0.57
PCDHA13-201ENST00000289272 FAM47CQ5HY64 1035 aa18.64■□□□□ 0.57
PCDHA13-201ENST00000289272 LONP2Q86WA8 852 aa18.64■□□□□ 0.57
PCDHA13-201ENST00000289272 MRPL46Q9H2W6 279 aaKnown RBP18.64■□□□□ 0.57
PCDHA13-201ENST00000289272 ANLNQ9NQW6 1124 aa18.64■□□□□ 0.57
PCDHA13-201ENST00000289272 DEPDC5O75140 1603 aa18.64■□□□□ 0.57
PCDHA13-201ENST00000289272 RC3H1Q5TC82 1133 aaKnown RBP18.64■□□□□ 0.57
PCDHA13-201ENST00000289272 ADSSL1Q8N142 457 aa18.64■□□□□ 0.57
PCDHA13-201ENST00000289272 CEP170BQ9Y4F5 1589 aaPredicted RBP18.64■□□□□ 0.57
PCDHA13-201ENST00000289272 SLC1A1P43005 524 aa18.63■□□□□ 0.57
PCDHA13-201ENST00000289272 ANTXR2P58335 489 aa18.63■□□□□ 0.57
PCDHA13-201ENST00000289272 ADCY1Q08828 1119 aa18.63■□□□□ 0.57
PCDHA13-201ENST00000289272 DEPDC1BQ8WUY9 529 aa18.63■□□□□ 0.57
PCDHA13-201ENST00000289272 CMTM5Q96DZ9 223 aa18.63■□□□□ 0.57
PCDHA13-201ENST00000289272 FAM84BQ96KN1 310 aaPredicted RBP18.63■□□□□ 0.57
PCDHA13-201ENST00000289272 CCSER1Q9C0I3 900 aa18.63■□□□□ 0.57
PCDHA13-201ENST00000289272 KLC2Q9H0B6 622 aa18.63■□□□□ 0.57
PCDHA13-201ENST00000289272 EHD2Q9NZN4 543 aa18.63■□□□□ 0.57
PCDHA13-201ENST00000289272 ZFATQ9P243 1243 aa18.63■□□□□ 0.57
PCDHA13-201ENST00000289272 ABCB11O95342 1321 aa18.63■□□□□ 0.57
PCDHA13-201ENST00000289272 NCK2O43639 380 aa18.63■□□□□ 0.57
PCDHA13-201ENST00000289272 ZRANB2O95218 330 aaKnown RBP eCLIP18.63■□□□□ 0.57
PCDHA13-201ENST00000289272 NQO1P15559 274 aaKnown RBP18.63■□□□□ 0.57
PCDHA13-201ENST00000289272 SERPINB10P48595 397 aa18.63■□□□□ 0.57
PCDHA13-201ENST00000289272 BASP1P80723 227 aaKnown RBP18.63■□□□□ 0.57
PCDHA13-201ENST00000289272 DDI1Q8WTU0 396 aa18.63■□□□□ 0.57
PCDHA13-201ENST00000289272 GPR101Q96P66 508 aaPredicted RBP18.63■□□□□ 0.57
PCDHA13-201ENST00000289272 PDS5AQ29RF7 1337 aaKnown RBP18.63■□□□□ 0.57
PCDHA13-201ENST00000289272 LRRIQ4A6NIV6 560 aa18.63■□□□□ 0.57
PCDHA13-201ENST00000289272 BBS9Q3SYG4 887 aa18.63■□□□□ 0.57
PCDHA13-201ENST00000289272 TBC1D9BQ66K14 1250 aa18.63■□□□□ 0.57
PCDHA13-201ENST00000289272 DARS2Q6PI48 645 aaKnown RBP18.63■□□□□ 0.57
PCDHA13-201ENST00000289272 USP6NLQ92738 828 aa18.63■□□□□ 0.57
PCDHA13-201ENST00000289272 SEL1LQ9UBV2 794 aa18.63■□□□□ 0.57
PCDHA13-201ENST00000289272 FBXO40Q9UH90 709 aa18.63■□□□□ 0.57
PCDHA13-201ENST00000289272 SLC16A3O15427 465 aaKnown RBP18.63■□□□□ 0.57
PCDHA13-201ENST00000289272 CTDNEP1O95476 244 aa18.63■□□□□ 0.57
PCDHA13-201ENST00000289272 FDPSP14324 419 aaKnown RBP18.63■□□□□ 0.57
PCDHA13-201ENST00000289272 ADGRB2O60241 1585 aa18.62■□□□□ 0.57
PCDHA13-201ENST00000289272 TEKT4Q8WW24 435 aa18.62■□□□□ 0.57
PCDHA13-201ENST00000289272 TTC17Q96AE7 1141 aa18.62■□□□□ 0.57
PCDHA13-201ENST00000289272 GJD4Q96KN9 370 aaPredicted RBP18.62■□□□□ 0.57
PCDHA13-201ENST00000289272 SNX5Q9Y5X3 404 aa18.62■□□□□ 0.57
PCDHA13-201ENST00000289272 ZBTB5O15062 677 aa18.62■□□□□ 0.57
PCDHA13-201ENST00000289272 RAD17O75943 681 aa18.62■□□□□ 0.57
PCDHA13-201ENST00000289272 HSPA4LO95757 839 aa18.62■□□□□ 0.57
PCDHA13-201ENST00000289272 BTNL9Q6UXG8 535 aa18.62■□□□□ 0.57
PCDHA13-201ENST00000289272 CYFIP1Q7L576 1253 aa18.62■□□□□ 0.57
PCDHA13-201ENST00000289272 DDX56Q9NY93 547 aaKnown RBP18.62■□□□□ 0.57
PCDHA13-201ENST00000289272 HNRNPDLO14979 420 aaKnown RBP18.62■□□□□ 0.57
PCDHA13-201ENST00000289272 ARHGEF9O43307 516 aa18.62■□□□□ 0.57
PCDHA13-201ENST00000289272 TFDP2Q14188 446 aa18.62■□□□□ 0.57
PCDHA13-201ENST00000289272 TXNRD1Q16881 649 aa18.62■□□□□ 0.57
PCDHA13-201ENST00000289272 ENOSF1Q7L5Y1 443 aa18.62■□□□□ 0.57
PCDHA13-201ENST00000289272 SH2D3CQ8N5H7 860 aa18.62■□□□□ 0.57
PCDHA13-201ENST00000289272 CYP26B1Q9NR63 512 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms