RNA–Protein interactions for RNA: ENST00000288976.3

PTPDC1-201, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-201ENST00000288976 GCNT3O95395 438 aa9.23□□□□□ -0.93
PTPDC1-201ENST00000288976 GJB1P08034 283 aa9.23□□□□□ -0.93
PTPDC1-201ENST00000288976 KLRC1P26715 233 aa9.23□□□□□ -0.93
PTPDC1-201ENST00000288976 PHKA2P46019 1235 aa9.23□□□□□ -0.93
PTPDC1-201ENST00000288976 CACNB1Q02641 598 aaPredicted RBP9.23□□□□□ -0.93
PTPDC1-201ENST00000288976 NCBP1Q09161 790 aaKnown RBP9.23□□□□□ -0.93
PTPDC1-201ENST00000288976 CAPSQ13938 189 aa9.23□□□□□ -0.93
PTPDC1-201ENST00000288976 NBPF20Q3BBV1 942 aa9.23□□□□□ -0.93
PTPDC1-201ENST00000288976 RSPH3Q86UC2 560 aa9.23□□□□□ -0.93
PTPDC1-201ENST00000288976 PRIMPOLQ96LW4 560 aa9.23□□□□□ -0.93
PTPDC1-201ENST00000288976 CENPHQ9H3R5 247 aa9.23□□□□□ -0.93
PTPDC1-201ENST00000288976 TBX20Q9UMR3 447 aa9.23□□□□□ -0.93
PTPDC1-201ENST00000288976 FAM26DQ5JW98 314 aa9.23□□□□□ -0.93
PTPDC1-201ENST00000288976 TAF3Q5VWG9 929 aa9.23□□□□□ -0.93
PTPDC1-201ENST00000288976 TTI2Q6NXR4 508 aa9.23□□□□□ -0.93
PTPDC1-201ENST00000288976 HAUS6Q7Z4H7 955 aa9.23□□□□□ -0.93
PTPDC1-201ENST00000288976 PRPF31Q8WWY3 499 aaKnown RBP9.23□□□□□ -0.93
PTPDC1-201ENST00000288976 TBC1D7Q9P0N9 293 aa9.23□□□□□ -0.93
PTPDC1-201ENST00000288976 SQORQ9Y6N5 450 aa9.23□□□□□ -0.93
PTPDC1-201ENST00000288976 A0A087WWV3 80 aa9.23□□□□□ -0.93
PTPDC1-201ENST00000288976 MYBP10242 640 aa9.23□□□□□ -0.93
PTPDC1-201ENST00000288976 MARSP56192 900 aaKnown RBP9.23□□□□□ -0.93
PTPDC1-201ENST00000288976 PEX3P56589 373 aa9.23□□□□□ -0.93
PTPDC1-201ENST00000288976 SARM1Q6SZW1 724 aa9.23□□□□□ -0.93
PTPDC1-201ENST00000288976 SERINC5Q86VE9 423 aa9.23□□□□□ -0.93
PTPDC1-201ENST00000288976 TAX1BP1Q86VP1 789 aa9.23□□□□□ -0.93
PTPDC1-201ENST00000288976 CCDC155Q8N6L0 562 aa9.23□□□□□ -0.93
PTPDC1-201ENST00000288976 DEPTORQ8TB45 409 aa9.23□□□□□ -0.93
PTPDC1-201ENST00000288976 GLT1D1Q96MS3 346 aa9.23□□□□□ -0.93
PTPDC1-201ENST00000288976 STYXL1Q9Y6J8 313 aa9.23□□□□□ -0.93
PTPDC1-201ENST00000288976 MRE11P49959 708 aa9.22□□□□□ -0.93
PTPDC1-201ENST00000288976 POU5F1Q01860 360 aaKnown RBP9.22□□□□□ -0.93
PTPDC1-201ENST00000288976 SPAG1Q07617 926 aa9.22□□□□□ -0.93
PTPDC1-201ENST00000288976 NCAPHQ15003 741 aa9.22□□□□□ -0.93
PTPDC1-201ENST00000288976 SNX17Q15036 470 aa9.22□□□□□ -0.93
PTPDC1-201ENST00000288976 CDKAL1Q5VV42 579 aa9.22□□□□□ -0.93
PTPDC1-201ENST00000288976 ZPBP2Q6X784 338 aa9.22□□□□□ -0.93
PTPDC1-201ENST00000288976 TMEM143Q96AN5 459 aa9.22□□□□□ -0.93
PTPDC1-201ENST00000288976 ADAMTS10Q9H324 1103 aa9.22□□□□□ -0.93
PTPDC1-201ENST00000288976 GPRC5CQ9NQ84 441 aa9.22□□□□□ -0.93
PTPDC1-201ENST00000288976 SETD4Q9NVD3 440 aa9.22□□□□□ -0.93
PTPDC1-201ENST00000288976 HDAC6Q9UBN7 1215 aa9.22□□□□□ -0.93
PTPDC1-201ENST00000288976 SGPL1O95470 568 aa9.22□□□□□ -0.93
PTPDC1-201ENST00000288976 PTENP60484 403 aa9.22□□□□□ -0.93
PTPDC1-201ENST00000288976 KIAA0319LQ8IZA0 1049 aa9.22□□□□□ -0.93
PTPDC1-201ENST00000288976 SEMA6BQ9H3T3 888 aa9.22□□□□□ -0.93
PTPDC1-201ENST00000288976 GPR32O75388 356 aa9.22□□□□□ -0.93
PTPDC1-201ENST00000288976 RPL13P26373 211 aaKnown RBP9.22□□□□□ -0.93
PTPDC1-201ENST00000288976 AXLP30530 894 aa9.22□□□□□ -0.93
PTPDC1-201ENST00000288976 GJA8P48165 433 aa9.22□□□□□ -0.93
PTPDC1-201ENST00000288976 CDK7P50613 346 aa9.22□□□□□ -0.93
PTPDC1-201ENST00000288976 GPC3P51654 580 aa9.22□□□□□ -0.93
PTPDC1-201ENST00000288976 RAD51AP2Q09MP3 1159 aa9.22□□□□□ -0.93
PTPDC1-201ENST00000288976 STRN3Q13033 797 aa9.22□□□□□ -0.93
PTPDC1-201ENST00000288976 ITGA7Q13683 1181 aa9.22□□□□□ -0.93
PTPDC1-201ENST00000288976 KYAT1Q16773 422 aa9.22□□□□□ -0.93
PTPDC1-201ENST00000288976 CXCL17Q6UXB2 119 aa9.22□□□□□ -0.93
PTPDC1-201ENST00000288976 CACNA2D4Q7Z3S7 1137 aa9.22□□□□□ -0.93
PTPDC1-201ENST00000288976 GAS2L3Q86XJ1 694 aa9.22□□□□□ -0.93
PTPDC1-201ENST00000288976 CCDC150Q8NCX0 1101 aa9.22□□□□□ -0.93
PTPDC1-201ENST00000288976 MKNK1Q9BUB5 465 aa9.22□□□□□ -0.93
PTPDC1-201ENST00000288976 INO80BQ9C086 356 aaPredicted RBP9.22□□□□□ -0.93
PTPDC1-201ENST00000288976 RBSNQ9H1K0 784 aa9.22□□□□□ -0.93
PTPDC1-201ENST00000288976 PRMT7Q9NVM4 692 aaPredicted RBP9.22□□□□□ -0.93
PTPDC1-201ENST00000288976 CNTNAP2Q9UHC6 1331 aa9.22□□□□□ -0.93
PTPDC1-201ENST00000288976 ARVCFO00192 962 aa9.21□□□□□ -0.93
PTPDC1-201ENST00000288976 CYP2C9P11712 490 aa9.21□□□□□ -0.93
PTPDC1-201ENST00000288976 COL6A1P12109 1028 aa9.21□□□□□ -0.93
PTPDC1-201ENST00000288976 ZNF18P17022 549 aa9.21□□□□□ -0.93
PTPDC1-201ENST00000288976 GARTP22102 1010 aa9.21□□□□□ -0.93
PTPDC1-201ENST00000288976 EEF1GP26641 437 aaKnown RBP9.21□□□□□ -0.93
PTPDC1-201ENST00000288976 NMT1P30419 496 aaKnown RBP9.21□□□□□ -0.93
PTPDC1-201ENST00000288976 HOXD13P35453 343 aa9.21□□□□□ -0.93
PTPDC1-201ENST00000288976 CASP5P51878 434 aa9.21□□□□□ -0.93
PTPDC1-201ENST00000288976 MBTD1Q05BQ5 628 aa9.21□□□□□ -0.93
PTPDC1-201ENST00000288976 TDRD12Q587J7 1177 aaKnown RBP9.21□□□□□ -0.93
PTPDC1-201ENST00000288976 AOPEPQ8N6M6 819 aa9.21□□□□□ -0.93
PTPDC1-201ENST00000288976 FZD8Q9H461 694 aa9.21□□□□□ -0.93
PTPDC1-201ENST00000288976 MGAT3Q09327 533 aa9.21□□□□□ -0.93
PTPDC1-201ENST00000288976 HSP90AA4PQ58FG1 418 aa9.21□□□□□ -0.93
PTPDC1-201ENST00000288976 SLFN12LQ6IEE8 588 aa9.21□□□□□ -0.93
PTPDC1-201ENST00000288976 MAEAQ7L5Y9 396 aa9.21□□□□□ -0.93
PTPDC1-201ENST00000288976 APBB1IPQ7Z5R6 666 aaPredicted RBP9.21□□□□□ -0.93
PTPDC1-201ENST00000288976 SMYD4Q8IYR2 804 aaPredicted RBP9.21□□□□□ -0.93
PTPDC1-201ENST00000288976 CPLX3Q8WVH0 158 aa9.21□□□□□ -0.93
PTPDC1-201ENST00000288976 CTAGE1Q96RT6 745 aa9.21□□□□□ -0.93
PTPDC1-201ENST00000288976 FGFBP2Q9BYJ0 223 aa9.21□□□□□ -0.93
PTPDC1-201ENST00000288976 GBP3Q9H0R5 595 aa9.21□□□□□ -0.93
PTPDC1-201ENST00000288976 RNF208Q9H0X6 261 aa9.21□□□□□ -0.93
PTPDC1-201ENST00000288976 STARD7Q9NQZ5 370 aa9.21□□□□□ -0.93
PTPDC1-201ENST00000288976 GRIN2DO15399 1336 aa9.21□□□□□ -0.94
PTPDC1-201ENST00000288976 ADGRA3Q8IWK6 1321 aa9.21□□□□□ -0.94
PTPDC1-201ENST00000288976 DENND3A2RUS2 1198 aa9.21□□□□□ -0.94
PTPDC1-201ENST00000288976 STK25O00506 426 aa9.21□□□□□ -0.94
PTPDC1-201ENST00000288976 SLC16A4O15374 487 aa9.21□□□□□ -0.94
PTPDC1-201ENST00000288976 CRYBB1P53674 252 aaPredicted RBP9.21□□□□□ -0.94
PTPDC1-201ENST00000288976 GDF6Q6KF10 455 aaPredicted RBP9.21□□□□□ -0.94
PTPDC1-201ENST00000288976 TAS1R3Q7RTX0 852 aa9.21□□□□□ -0.94
PTPDC1-201ENST00000288976 TRAPPC12Q8WVT3 735 aa9.21□□□□□ -0.94
PTPDC1-201ENST00000288976 CCDC51Q96ER9 411 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms