RNA–Protein interactions for RNA: ENST00000288022.1

PDF-201, Transcript of peptide deformylase, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDF, Length 1,158 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDF-201ENST00000288022 HCSTQ9UBK5 93 aa27.77■■■□□ 2.04
PDF-201ENST00000288022 CCDC39Q9UFE4 941 aa27.77■■■□□ 2.04
PDF-201ENST00000288022 MORC2Q9Y6X9 1032 aaPredicted RBP27.77■■■□□ 2.04
PDF-201ENST00000288022 SPTLC2O15270 562 aa27.76■■■□□ 2.03
PDF-201ENST00000288022 ZNF623O75123 536 aa27.76■■■□□ 2.03
PDF-201ENST00000288022 GUCY2CP25092 1073 aa27.76■■■□□ 2.03
PDF-201ENST00000288022 PEX3P56589 373 aa27.76■■■□□ 2.03
PDF-201ENST00000288022 DMP1Q13316 513 aaPredicted RBP27.76■■■□□ 2.03
PDF-201ENST00000288022 MAPK6Q16659 721 aa27.76■■■□□ 2.03
PDF-201ENST00000288022 PTPROQ16827 1216 aa27.76■■■□□ 2.03
PDF-201ENST00000288022 DAW1Q8N136 415 aa27.76■■■□□ 2.03
PDF-201ENST00000288022 LRRC43Q8N309 656 aa27.76■■■□□ 2.03
PDF-201ENST00000288022 PLVAPQ9BX97 442 aa27.76■■■□□ 2.03
PDF-201ENST00000288022 AAASQ9NRG9 546 aa27.76■■■□□ 2.03
PDF-201ENST00000288022 KCND2Q9NZV8 630 aa27.76■■■□□ 2.03
PDF-201ENST00000288022 PRKCBP05771 671 aa27.75■■■□□ 2.03
PDF-201ENST00000288022 GLB1LQ6UWU2 654 aa27.75■■■□□ 2.03
PDF-201ENST00000288022 PPP4R3CPQ6ZMV5 832 aa27.75■■■□□ 2.03
PDF-201ENST00000288022 GPBP1Q86WP2 473 aa27.75■■■□□ 2.03
PDF-201ENST00000288022 RAD54LQ92698 747 aa27.75■■■□□ 2.03
PDF-201ENST00000288022 PRIMPOLQ96LW4 560 aa27.75■■■□□ 2.03
PDF-201ENST00000288022 EIF2AQ9BY44 585 aaKnown RBP27.75■■■□□ 2.03
PDF-201ENST00000288022 TRIM6Q9C030 488 aaPredicted RBP27.75■■■□□ 2.03
PDF-201ENST00000288022 FZD8Q9H461 694 aa27.75■■■□□ 2.03
PDF-201ENST00000288022 LMCD1Q9NZU5 365 aa27.75■■■□□ 2.03
PDF-201ENST00000288022 INPP5FQ9Y2H2 1132 aa27.75■■■□□ 2.03
PDF-201ENST00000288022 PCDHB12Q9Y5F1 795 aa27.75■■■□□ 2.03
PDF-201ENST00000288022 MEIS3P2A8K0S8 358 aa27.74■■■□□ 2.03
PDF-201ENST00000288022 SFI1A8K8P3 1242 aa27.74■■■□□ 2.03
PDF-201ENST00000288022 YEATS4O95619 227 aa27.74■■■□□ 2.03
PDF-201ENST00000288022 EFNA5P52803 228 aa27.74■■■□□ 2.03
PDF-201ENST00000288022 MAPK7Q13164 816 aa27.74■■■□□ 2.03
PDF-201ENST00000288022 PRPF4BQ13523 1007 aaKnown RBP27.74■■■□□ 2.03
PDF-201ENST00000288022 MCM6Q14566 821 aa27.74■■■□□ 2.03
PDF-201ENST00000288022 FAM187BQ17R55 369 aa27.74■■■□□ 2.03
PDF-201ENST00000288022 CDR2LQ86X02 465 aaPredicted RBP27.74■■■□□ 2.03
PDF-201ENST00000288022 CNNM3Q8NE01 707 aa27.74■■■□□ 2.03
PDF-201ENST00000288022 LRRC15Q8TF66 581 aa27.74■■■□□ 2.03
PDF-201ENST00000288022 MRPL9Q9BYD2 267 aaKnown RBP27.74■■■□□ 2.03
PDF-201ENST00000288022 BLOC1S4Q9NUP1 217 aa27.74■■■□□ 2.03
PDF-201ENST00000288022 CNTNAP2Q9UHC6 1331 aa27.73■■■□□ 2.03
PDF-201ENST00000288022 NPHP3-ACAD11A0A0J9YXS1 232 aa27.73■■■□□ 2.03
PDF-201ENST00000288022 KRT18P05783 430 aaKnown RBP27.73■■■□□ 2.03
PDF-201ENST00000288022 LAG3P18627 525 aa27.73■■■□□ 2.03
PDF-201ENST00000288022 NPTX2P47972 431 aa27.73■■■□□ 2.03
PDF-201ENST00000288022 CACNB1Q02641 598 aaPredicted RBP27.73■■■□□ 2.03
PDF-201ENST00000288022 SLC27A1Q6PCB7 646 aa27.73■■■□□ 2.03
PDF-201ENST00000288022 LRRC55Q6ZSA7 311 aa27.73■■■□□ 2.03
PDF-201ENST00000288022 MRPL10Q7Z7H8 261 aaKnown RBP27.73■■■□□ 2.03
PDF-201ENST00000288022 LARP4BQ92615 738 aaKnown RBP27.73■■■□□ 2.03
PDF-201ENST00000288022 P2RX5Q93086 422 aa27.73■■■□□ 2.03
PDF-201ENST00000288022 CCDC113Q9H0I3 377 aa27.73■■■□□ 2.03
PDF-201ENST00000288022 CWH43Q9H720 699 aa27.73■■■□□ 2.03
PDF-201ENST00000288022 C17orf75Q9HAS0 396 aa27.73■■■□□ 2.03
PDF-201ENST00000288022 KMT5AQ9NQR1 393 aa27.73■■■□□ 2.03
PDF-201ENST00000288022 IPPQ9Y573 584 aa27.73■■■□□ 2.03
PDF-201ENST00000288022 A0A1B0GUA9 196 aa27.72■■■□□ 2.03
PDF-201ENST00000288022 K7ERI5 159 aa27.72■■■□□ 2.03
PDF-201ENST00000288022 PPP6R2O75170 966 aa27.72■■■□□ 2.03
PDF-201ENST00000288022 CSPG5O95196 566 aa27.72■■■□□ 2.03
PDF-201ENST00000288022 NPTXRO95502 500 aa27.72■■■□□ 2.03
PDF-201ENST00000288022 ITGA4P13612 1032 aa27.72■■■□□ 2.03
PDF-201ENST00000288022 NCLP19338 710 aaKnown RBP27.72■■■□□ 2.03
PDF-201ENST00000288022 SKIV2LQ15477 1246 aaKnown RBP27.72■■■□□ 2.03
PDF-201ENST00000288022 NAALADL2Q58DX5 795 aa27.72■■■□□ 2.03
PDF-201ENST00000288022 RRAGBQ5VZM2 374 aa27.72■■■□□ 2.03
PDF-201ENST00000288022 KLHL23Q8NBE8 558 aa27.72■■■□□ 2.03
PDF-201ENST00000288022 COLGALT1Q8NBJ5 622 aa27.72■■■□□ 2.03
PDF-201ENST00000288022 MRPL38Q96DV4 380 aaKnown RBP27.72■■■□□ 2.03
PDF-201ENST00000288022 APOL6Q9BWW8 343 aa27.72■■■□□ 2.03
PDF-201ENST00000288022 RSAD1Q9HA92 442 aa27.72■■■□□ 2.03
PDF-201ENST00000288022 ALG13Q9NP73 1137 aaKnown RBP27.72■■■□□ 2.03
PDF-201ENST00000288022 ACKR2O00590 384 aa27.71■■■□□ 2.03
PDF-201ENST00000288022 GRM6O15303 877 aa27.71■■■□□ 2.03
PDF-201ENST00000288022 ARSHQ5FYA8 562 aa27.71■■■□□ 2.03
PDF-201ENST00000288022 NOMO2Q5JPE7 1267 aa27.71■■■□□ 2.03
PDF-201ENST00000288022 ATL3Q6DD88 541 aa27.71■■■□□ 2.03
PDF-201ENST00000288022 AGMOQ6ZNB7 445 aa27.71■■■□□ 2.03
PDF-201ENST00000288022 THNSL1Q8IYQ7 743 aa27.71■■■□□ 2.03
PDF-201ENST00000288022 HACE1Q8IYU2 909 aa27.71■■■□□ 2.03
PDF-201ENST00000288022 SMG8Q8ND04 991 aaKnown RBP27.71■■■□□ 2.03
PDF-201ENST00000288022 URGCPQ8TCY9 931 aa27.71■■■□□ 2.03
PDF-201ENST00000288022 RSPH1Q8WYR4 309 aa27.71■■■□□ 2.03
PDF-201ENST00000288022 CFAP45Q9UL16 551 aa27.71■■■□□ 2.03
PDF-201ENST00000288022 PLAGL2Q9UPG8 496 aa27.71■■■□□ 2.03
PDF-201ENST00000288022 USP20Q9Y2K6 914 aa27.71■■■□□ 2.03
PDF-201ENST00000288022 HES2Q9Y543 173 aa27.71■■■□□ 2.03
PDF-201ENST00000288022 TTLL13PA6NNM8 815 aa27.7■■■□□ 2.02
PDF-201ENST00000288022 N4BP3O15049 544 aa27.7■■■□□ 2.02
PDF-201ENST00000288022 OFD1O75665 1012 aa27.7■■■□□ 2.02
PDF-201ENST00000288022 ITGB1P05556 798 aa27.7■■■□□ 2.02
PDF-201ENST00000288022 PLS3P13797 630 aa27.7■■■□□ 2.02
PDF-201ENST00000288022 DDIT3P35638 169 aa27.7■■■□□ 2.02
PDF-201ENST00000288022 DNM1Q05193 864 aaKnown RBP27.7■■■□□ 2.02
PDF-201ENST00000288022 SLC17A8Q8NDX2 589 aa27.7■■■□□ 2.02
PDF-201ENST00000288022 REEP2Q9BRK0 252 aa27.7■■■□□ 2.02
PDF-201ENST00000288022 PANK2Q9BZ23 570 aa27.7■■■□□ 2.02
PDF-201ENST00000288022 LMAN2LQ9H0V9 348 aa27.7■■■□□ 2.02
PDF-201ENST00000288022 STK17AQ9UEE5 414 aa27.7■■■□□ 2.02
PDF-201ENST00000288022 KCNG1Q9UIX4 513 aa27.7■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms