RNA–Protein interactions for RNA: ENST00000279452.10

CD44-204, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-204ENST00000279452 MYLIPQ8WY64 445 aa7.2□□□□□ -1.26
CD44-204ENST00000279452 STAMQ92783 540 aa7.2□□□□□ -1.26
CD44-204ENST00000279452 LPPQ93052 612 aa7.2□□□□□ -1.26
CD44-204ENST00000279452 PGBD4Q96DM1 585 aa7.2□□□□□ -1.26
CD44-204ENST00000279452 TGS1Q96RS0 853 aaKnown RBP7.2□□□□□ -1.26
CD44-204ENST00000279452 ADPGKQ9BRR6 497 aa7.2□□□□□ -1.26
CD44-204ENST00000279452 C17orf80Q9BSJ5 609 aa7.2□□□□□ -1.26
CD44-204ENST00000279452 TCHPQ9BT92 498 aa7.2□□□□□ -1.26
CD44-204ENST00000279452 NFKBIZQ9BYH8 718 aa7.2□□□□□ -1.26
CD44-204ENST00000279452 GBP3Q9H0R5 595 aa7.2□□□□□ -1.26
CD44-204ENST00000279452 TTYH1Q9H313 450 aaPredicted RBP7.2□□□□□ -1.26
CD44-204ENST00000279452 SEMA6BQ9H3T3 888 aa7.2□□□□□ -1.26
CD44-204ENST00000279452 PARVGQ9HBI0 331 aa7.2□□□□□ -1.26
CD44-204ENST00000279452 ANKFY1Q9P2R3 1169 aa7.2□□□□□ -1.26
CD44-204ENST00000279452 RCOR1Q9UKL0 485 aa7.2□□□□□ -1.26
CD44-204ENST00000279452 ODF2LQ9ULJ1 636 aa7.2□□□□□ -1.26
CD44-204ENST00000279452 USP20Q9Y2K6 914 aa7.2□□□□□ -1.26
CD44-204ENST00000279452 PCDHB2Q9Y5E7 798 aa7.2□□□□□ -1.26
CD44-204ENST00000279452 MORC2Q9Y6X9 1032 aaPredicted RBP7.2□□□□□ -1.26
CD44-204ENST00000279452 CNTNAP2Q9UHC6 1331 aa7.2□□□□□ -1.26
CD44-204ENST00000279452 KAT6AQ92794 2004 aa7.2□□□□□ -1.26
CD44-204ENST00000279452 MYH15Q9Y2K3 1946 aa7.19□□□□□ -1.26
CD44-204ENST00000279452 A0A087X0B3 334 aa7.19□□□□□ -1.26
CD44-204ENST00000279452 A0A0U1RQF3 1178 aa7.19□□□□□ -1.26
CD44-204ENST00000279452 A0A1B0GVL5 298 aa7.19□□□□□ -1.26
CD44-204ENST00000279452 H0YCG3 227 aa7.19□□□□□ -1.26
CD44-204ENST00000279452 RFXAPO00287 272 aa7.19□□□□□ -1.26
CD44-204ENST00000279452 N4BP3O15049 544 aa7.19□□□□□ -1.26
CD44-204ENST00000279452 TRAK2O60296 914 aa7.19□□□□□ -1.26
CD44-204ENST00000279452 ARHGEF15O94989 841 aa7.19□□□□□ -1.26
CD44-204ENST00000279452 ITGA4P13612 1032 aa7.19□□□□□ -1.26
CD44-204ENST00000279452 PFKFB1P16118 471 aa7.19□□□□□ -1.26
CD44-204ENST00000279452 ARF4P18085 180 aaPredicted RBP7.19□□□□□ -1.26
CD44-204ENST00000279452 AFMP43652 599 aa7.19□□□□□ -1.26
CD44-204ENST00000279452 ASIC1P78348 528 aa7.19□□□□□ -1.26
CD44-204ENST00000279452 HTRA4P83105 476 aaPredicted RBP7.19□□□□□ -1.26
CD44-204ENST00000279452 AMPD3Q01432 767 aa7.19□□□□□ -1.26
CD44-204ENST00000279452 RNASELQ05823 741 aaKnown RBP7.19□□□□□ -1.26
CD44-204ENST00000279452 POU5F1BQ06416 359 aa7.19□□□□□ -1.26
CD44-204ENST00000279452 MAPK7Q13164 816 aa7.19□□□□□ -1.26
CD44-204ENST00000279452 GIT2Q14161 759 aa7.19□□□□□ -1.26
CD44-204ENST00000279452 ZNF568Q3ZCX4 644 aa7.19□□□□□ -1.26
CD44-204ENST00000279452 ARSHQ5FYA8 562 aa7.19□□□□□ -1.26
CD44-204ENST00000279452 AXDND1Q5T1B0 1012 aaPredicted RBP7.19□□□□□ -1.26
CD44-204ENST00000279452 ATF7IP2Q5U623 682 aa7.19□□□□□ -1.26
CD44-204ENST00000279452 RESP18Q5W5W9 173 aa7.19□□□□□ -1.26
CD44-204ENST00000279452 SLC27A1Q6PCB7 646 aa7.19□□□□□ -1.26
CD44-204ENST00000279452 GLB1LQ6UWU2 654 aa7.19□□□□□ -1.26
CD44-204ENST00000279452 FAM43BQ6ZT52 329 aaPredicted RBP7.19□□□□□ -1.26
CD44-204ENST00000279452 APBB1IPQ7Z5R6 666 aaPredicted RBP7.19□□□□□ -1.26
CD44-204ENST00000279452 SPRED2Q7Z698 418 aa7.19□□□□□ -1.26
CD44-204ENST00000279452 ZBTB33Q86T24 672 aa7.19□□□□□ -1.26
CD44-204ENST00000279452 SFR1Q86XK3 245 aa7.19□□□□□ -1.26
CD44-204ENST00000279452 FAM178BQ8IXR5 827 aa7.19□□□□□ -1.26
CD44-204ENST00000279452 CMTR2Q8IYT2 770 aaKnown RBP7.19□□□□□ -1.26
CD44-204ENST00000279452 DAW1Q8N136 415 aa7.19□□□□□ -1.26
CD44-204ENST00000279452 LRRC43Q8N309 656 aa7.19□□□□□ -1.26
CD44-204ENST00000279452 FSIP1Q8NA03 581 aa7.19□□□□□ -1.26
CD44-204ENST00000279452 FBXO22Q8NEZ5 403 aa7.19□□□□□ -1.26
CD44-204ENST00000279452 URGCPQ8TCY9 931 aa7.19□□□□□ -1.26
CD44-204ENST00000279452 GDPD5Q8WTR4 605 aa7.19□□□□□ -1.26
CD44-204ENST00000279452 PPM1EQ8WY54 764 aa7.19□□□□□ -1.26
CD44-204ENST00000279452 MRPS27Q92552 414 aaKnown RBP7.19□□□□□ -1.26
CD44-204ENST00000279452 DDX12PQ92771 950 aa7.19□□□□□ -1.26
CD44-204ENST00000279452 CCDC51Q96ER9 411 aa7.19□□□□□ -1.26
CD44-204ENST00000279452 PRIMPOLQ96LW4 560 aa7.19□□□□□ -1.26
CD44-204ENST00000279452 CDX2Q99626 313 aaPredicted RBP7.19□□□□□ -1.26
CD44-204ENST00000279452 PYM1Q9BRP8 204 aaKnown RBP7.19□□□□□ -1.26
CD44-204ENST00000279452 EIF2AQ9BY44 585 aaKnown RBP7.19□□□□□ -1.26
CD44-204ENST00000279452 MRPL4Q9BYD3 311 aaKnown RBP7.19□□□□□ -1.26
CD44-204ENST00000279452 LRRC27Q9C0I9 530 aa7.19□□□□□ -1.26
CD44-204ENST00000279452 CUEDC2Q9H467 287 aa7.19□□□□□ -1.26
CD44-204ENST00000279452 NXF3Q9H4D5 531 aaKnown RBP7.19□□□□□ -1.26
CD44-204ENST00000279452 ELAC1Q9H777 363 aaKnown RBP7.19□□□□□ -1.26
CD44-204ENST00000279452 C17orf75Q9HAS0 396 aa7.19□□□□□ -1.26
CD44-204ENST00000279452 CHMP5Q9NZZ3 219 aa7.19□□□□□ -1.26
CD44-204ENST00000279452 TBC1D7Q9P0N9 293 aa7.19□□□□□ -1.26
CD44-204ENST00000279452 PARP2Q9UGN5 583 aa7.19□□□□□ -1.26
CD44-204ENST00000279452 KCNG1Q9UIX4 513 aa7.19□□□□□ -1.26
CD44-204ENST00000279452 KCNH3Q9ULD8 1083 aa7.19□□□□□ -1.26
CD44-204ENST00000279452 CIZ1Q9ULV3 898 aaPredicted RBP7.19□□□□□ -1.26
CD44-204ENST00000279452 RBM19Q9Y4C8 960 aaKnown RBP7.19□□□□□ -1.26
CD44-204ENST00000279452 HES2Q9Y543 173 aa7.19□□□□□ -1.26
CD44-204ENST00000279452 IPPQ9Y573 584 aa7.19□□□□□ -1.26
CD44-204ENST00000279452 MRPL42Q9Y6G3 142 aaKnown RBP7.19□□□□□ -1.26
CD44-204ENST00000279452 MYMKA6NI61 221 aa7.18□□□□□ -1.26
CD44-204ENST00000279452 ACKR2O00590 384 aa7.18□□□□□ -1.26
CD44-204ENST00000279452 HNRNPDLO14979 420 aaKnown RBP7.18□□□□□ -1.26
CD44-204ENST00000279452 GTPBP6O43824 516 aaPredicted RBP7.18□□□□□ -1.26
CD44-204ENST00000279452 ZC3H11AO75152 810 aaKnown RBP eCLIP7.18□□□□□ -1.26
CD44-204ENST00000279452 GCNT3O95395 438 aa7.18□□□□□ -1.26
CD44-204ENST00000279452 EOMESO95936 686 aa7.18□□□□□ -1.26
CD44-204ENST00000279452 GAP43P17677 238 aa7.18□□□□□ -1.26
CD44-204ENST00000279452 AKAP5P24588 427 aa7.18□□□□□ -1.26
CD44-204ENST00000279452 NMT1P30419 496 aaKnown RBP7.18□□□□□ -1.26
CD44-204ENST00000279452 HOXA11P31270 313 aaPredicted RBP7.18□□□□□ -1.26
CD44-204ENST00000279452 CA8P35219 290 aa7.18□□□□□ -1.26
CD44-204ENST00000279452 MLH1P40692 756 aa7.18□□□□□ -1.26
CD44-204ENST00000279452 SYKP43405 635 aa7.18□□□□□ -1.26
CD44-204ENST00000279452 LIG4P49917 911 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms