RNA–Protein interactions for RNA: ENST00000279027.8

SLC13A3-201, Transcript of solute carrier family 13 member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC13A3, Length 4,017 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC13A3-201ENST00000279027 VIL1P09327 827 aaKnown RBP12.8□□□□□ -0.36
SLC13A3-201ENST00000279027 CD19P15391 556 aa12.8□□□□□ -0.36
SLC13A3-201ENST00000279027 CTNNA2P26232 953 aa12.8□□□□□ -0.36
SLC13A3-201ENST00000279027 MFAP3P55082 362 aa12.8□□□□□ -0.36
SLC13A3-201ENST00000279027 PSMC5P62195 406 aa12.8□□□□□ -0.36
SLC13A3-201ENST00000279027 CALCOCO2Q13137 446 aa12.8□□□□□ -0.36
SLC13A3-201ENST00000279027 CPLX4Q7Z7G2 160 aa12.8□□□□□ -0.36
SLC13A3-201ENST00000279027 SLC5A5Q92911 643 aa12.8□□□□□ -0.36
SLC13A3-201ENST00000279027 SEL1LQ9UBV2 794 aa12.8□□□□□ -0.36
SLC13A3-201ENST00000279027 SLC16A3O15427 465 aaKnown RBP12.79□□□□□ -0.36
SLC13A3-201ENST00000279027 VCAM1P19320 739 aa12.79□□□□□ -0.36
SLC13A3-201ENST00000279027 CIITAP33076 1130 aa12.79□□□□□ -0.36
SLC13A3-201ENST00000279027 PIK3CAP42336 1068 aa12.79□□□□□ -0.36
SLC13A3-201ENST00000279027 PPP3CAQ08209 521 aa12.79□□□□□ -0.36
SLC13A3-201ENST00000279027 CDR2LQ86X02 465 aaPredicted RBP12.79□□□□□ -0.36
SLC13A3-201ENST00000279027 RFFLQ8WZ73 363 aa12.79□□□□□ -0.36
SLC13A3-201ENST00000279027 SYN2Q92777 582 aaPredicted RBP12.79□□□□□ -0.36
SLC13A3-201ENST00000279027 IMPG2Q9BZV3 1241 aa12.79□□□□□ -0.36
SLC13A3-201ENST00000279027 KCNK9Q9NPC2 374 aa12.79□□□□□ -0.36
SLC13A3-201ENST00000279027 VGLL3A8MV65 326 aa12.79□□□□□ -0.36
SLC13A3-201ENST00000279027 TMOD1P28289 359 aa12.79□□□□□ -0.36
SLC13A3-201ENST00000279027 RARRES1P49788 294 aa12.79□□□□□ -0.36
SLC13A3-201ENST00000279027 DR1Q01658 176 aa12.79□□□□□ -0.36
SLC13A3-201ENST00000279027 SNRNP35Q16560 246 aaKnown RBP12.79□□□□□ -0.36
SLC13A3-201ENST00000279027 UGCGQ16739 394 aa12.79□□□□□ -0.36
SLC13A3-201ENST00000279027 C10orf76Q5T2E6 689 aa12.79□□□□□ -0.36
SLC13A3-201ENST00000279027 SCARA5Q6ZMJ2 495 aa12.79□□□□□ -0.36
SLC13A3-201ENST00000279027 TBC1D22BQ9NU19 505 aa12.79□□□□□ -0.36
SLC13A3-201ENST00000279027 PLS3P13797 630 aa12.79□□□□□ -0.36
SLC13A3-201ENST00000279027 CCND2P30279 289 aa12.79□□□□□ -0.36
SLC13A3-201ENST00000279027 IFNAR2P48551 515 aa12.79□□□□□ -0.36
SLC13A3-201ENST00000279027 DCAF15Q66K64 600 aa12.79□□□□□ -0.36
SLC13A3-201ENST00000279027 PHLDB3Q6NSJ2 640 aa12.79□□□□□ -0.36
SLC13A3-201ENST00000279027 DLK2Q6UY11 383 aa12.79□□□□□ -0.36
SLC13A3-201ENST00000279027 OTUD6BQ8N6M0 293 aa12.79□□□□□ -0.36
SLC13A3-201ENST00000279027 ATP6V0A1Q93050 837 aa12.79□□□□□ -0.36
SLC13A3-201ENST00000279027 RASSF4Q9H2L5 321 aa12.79□□□□□ -0.36
SLC13A3-201ENST00000279027 SYNCQ9H7C4 482 aa12.79□□□□□ -0.36
SLC13A3-201ENST00000279027 OLFML3Q9NRN5 406 aa12.79□□□□□ -0.36
SLC13A3-201ENST00000279027 ODF2LQ9ULJ1 636 aa12.79□□□□□ -0.36
SLC13A3-201ENST00000279027 PCDHB4Q9Y5E5 795 aa12.79□□□□□ -0.36
SLC13A3-201ENST00000279027 ALG6Q9Y672 507 aa12.79□□□□□ -0.36
SLC13A3-201ENST00000279027 GOLGA6L7A0A1B0GV03 622 aa12.78□□□□□ -0.36
SLC13A3-201ENST00000279027 NR1D1P20393 614 aa12.78□□□□□ -0.36
SLC13A3-201ENST00000279027 CNGA1P29973 690 aa12.78□□□□□ -0.36
SLC13A3-201ENST00000279027 GNPTABQ3T906 1256 aa12.78□□□□□ -0.36
SLC13A3-201ENST00000279027 LNX1Q8TBB1 728 aaPredicted RBP12.78□□□□□ -0.36
SLC13A3-201ENST00000279027 C1orf54Q8WWF1 131 aa12.78□□□□□ -0.36
SLC13A3-201ENST00000279027 CPA5Q8WXQ8 436 aa12.78□□□□□ -0.36
SLC13A3-201ENST00000279027 NAP1L3Q99457 506 aaPredicted RBP12.78□□□□□ -0.36
SLC13A3-201ENST00000279027 NUP85Q9BW27 656 aa12.78□□□□□ -0.36
SLC13A3-201ENST00000279027 TAF1DQ9H5J8 278 aaPredicted RBP12.78□□□□□ -0.36
SLC13A3-201ENST00000279027 CNOT8Q9UFF9 292 aaKnown RBP12.78□□□□□ -0.36
SLC13A3-201ENST00000279027 ECM29Q5VYK3 1845 aa12.78□□□□□ -0.36
SLC13A3-201ENST00000279027 MYO1CO00159 1063 aa12.78□□□□□ -0.36
SLC13A3-201ENST00000279027 NOP56O00567 594 aaKnown RBP12.78□□□□□ -0.36
SLC13A3-201ENST00000279027 PJA2O43164 708 aa12.78□□□□□ -0.36
SLC13A3-201ENST00000279027 MAPK4P31152 587 aa12.78□□□□□ -0.36
SLC13A3-201ENST00000279027 ITGB3BPQ13352 177 aaPredicted RBP12.78□□□□□ -0.36
SLC13A3-201ENST00000279027 COBLL1Q53SF7 1204 aa12.78□□□□□ -0.36
SLC13A3-201ENST00000279027 IWS1Q96ST2 819 aa12.78□□□□□ -0.36
SLC13A3-201ENST00000279027 RIT2Q99578 217 aa12.78□□□□□ -0.36
SLC13A3-201ENST00000279027 MTRF1LQ9UGC7 380 aaKnown RBP12.78□□□□□ -0.36
SLC13A3-201ENST00000279027 ANAPC7Q9UJX3 599 aa12.78□□□□□ -0.36
SLC13A3-201ENST00000279027 PCDHA10Q9Y5I2 948 aa12.78□□□□□ -0.36
SLC13A3-201ENST00000279027 WDR46O15213 610 aaKnown RBP12.78□□□□□ -0.36
SLC13A3-201ENST00000279027 SEC24CP53992 1094 aa12.78□□□□□ -0.36
SLC13A3-201ENST00000279027 SLC47A2Q86VL8 602 aa12.78□□□□□ -0.36
SLC13A3-201ENST00000279027 RANBP17Q9H2T7 1088 aaKnown RBP12.78□□□□□ -0.36
SLC13A3-201ENST00000279027 KLHL11Q9NVR0 708 aa12.78□□□□□ -0.36
SLC13A3-201ENST00000279027 LCMT1Q9UIC8 334 aa12.78□□□□□ -0.36
SLC13A3-201ENST00000279027 ANKRD63C9JTQ0 380 aa12.78□□□□□ -0.36
SLC13A3-201ENST00000279027 EIF3DO15371 548 aaKnown RBP eCLIP12.78□□□□□ -0.36
SLC13A3-201ENST00000279027 MMEP08473 750 aa12.78□□□□□ -0.36
SLC13A3-201ENST00000279027 ATF7P17544 494 aaPredicted RBP12.78□□□□□ -0.36
SLC13A3-201ENST00000279027 NOVP48745 357 aa12.78□□□□□ -0.36
SLC13A3-201ENST00000279027 GPC5P78333 572 aa12.78□□□□□ -0.36
SLC13A3-201ENST00000279027 FMO2Q99518 471 aa12.78□□□□□ -0.36
SLC13A3-201ENST00000279027 C11orf70Q9BRQ4 267 aa12.78□□□□□ -0.36
SLC13A3-201ENST00000279027 POLR3FQ9H1D9 316 aaPredicted RBP12.78□□□□□ -0.36
SLC13A3-201ENST00000279027 AS3MTQ9HBK9 375 aa12.78□□□□□ -0.36
SLC13A3-201ENST00000279027 RIPK3Q9Y572 518 aa12.78□□□□□ -0.36
SLC13A3-201ENST00000279027 IFNB1P01574 187 aa12.77□□□□□ -0.36
SLC13A3-201ENST00000279027 ERVK-9P63128 1117 aa12.77□□□□□ -0.36
SLC13A3-201ENST00000279027 MKRN3Q13064 507 aaKnown RBP12.77□□□□□ -0.36
SLC13A3-201ENST00000279027 PPP2R5CQ13362 524 aa12.77□□□□□ -0.36
SLC13A3-201ENST00000279027 LRRC31Q6UY01 552 aa12.77□□□□□ -0.36
SLC13A3-201ENST00000279027 TAS1R2Q8TE23 839 aa12.77□□□□□ -0.36
SLC13A3-201ENST00000279027 HAUS1Q96CS2 278 aa12.77□□□□□ -0.36
SLC13A3-201ENST00000279027 RAB17Q9H0T7 212 aa12.77□□□□□ -0.36
SLC13A3-201ENST00000279027 AGO4Q9HCK5 861 aaKnown RBP12.77□□□□□ -0.36
SLC13A3-201ENST00000279027 K7ERI5 159 aa12.77□□□□□ -0.37
SLC13A3-201ENST00000279027 CYP3A4P08684 503 aa12.77□□□□□ -0.37
SLC13A3-201ENST00000279027 IRX3P78415 501 aaPredicted RBP12.77□□□□□ -0.37
SLC13A3-201ENST00000279027 HP1BP3Q5SSJ5 553 aaPredicted RBP12.77□□□□□ -0.37
SLC13A3-201ENST00000279027 SPOPLQ6IQ16 392 aa12.77□□□□□ -0.37
SLC13A3-201ENST00000279027 BTNL9Q6UXG8 535 aa12.77□□□□□ -0.37
SLC13A3-201ENST00000279027 ZNF564Q8TBZ8 553 aaPredicted RBP12.77□□□□□ -0.37
SLC13A3-201ENST00000279027 TATDN2Q93075 761 aa12.77□□□□□ -0.37
SLC13A3-201ENST00000279027 WNK4Q96J92 1243 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms