RNA–Protein interactions for RNA: ENST00000275233.11

SHPRH-201, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SHPRH, Length 6,649 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-201ENST00000275233 RBM41Q96IZ5 413 aaKnown RBP12.64□□□□□ -0.39
SHPRH-201ENST00000275233 MAP3K4Q9Y6R4 1608 aa12.64□□□□□ -0.39
SHPRH-201ENST00000275233 TXNP10599 105 aaKnown RBP12.64□□□□□ -0.39
SHPRH-201ENST00000275233 ANKRD40Q6AI12 368 aa12.64□□□□□ -0.39
SHPRH-201ENST00000275233 ZC3H18Q86VM9 953 aaKnown RBP12.64□□□□□ -0.39
SHPRH-201ENST00000275233 YAF2Q8IY57 180 aa12.64□□□□□ -0.39
SHPRH-201ENST00000275233 TRIM4Q9C037 500 aa12.64□□□□□ -0.39
SHPRH-201ENST00000275233 ZCWPW1Q9H0M4 648 aa12.64□□□□□ -0.39
SHPRH-201ENST00000275233 BARHL2Q9NY43 387 aa12.64□□□□□ -0.39
SHPRH-201ENST00000275233 TMEM247A6NEH6 219 aa12.64□□□□□ -0.39
SHPRH-201ENST00000275233 CALB1P05937 261 aa12.64□□□□□ -0.39
SHPRH-201ENST00000275233 PDCD2Q16342 344 aaPredicted RBP12.64□□□□□ -0.39
SHPRH-201ENST00000275233 GRAMD1BQ3KR37 738 aa12.64□□□□□ -0.39
SHPRH-201ENST00000275233 LDHDQ86WU2 507 aa12.64□□□□□ -0.39
SHPRH-201ENST00000275233 KIAA1586Q9HCI6 787 aa12.64□□□□□ -0.39
SHPRH-201ENST00000275233 SLC9A2Q9UBY0 812 aa12.64□□□□□ -0.39
SHPRH-201ENST00000275233 CDK12Q9NYV4 1490 aaPredicted RBP12.64□□□□□ -0.39
SHPRH-201ENST00000275233 MAP3K7O43318 606 aa12.64□□□□□ -0.39
SHPRH-201ENST00000275233 ATP9BO43861 1147 aa12.64□□□□□ -0.39
SHPRH-201ENST00000275233 CASP8Q14790 479 aa12.64□□□□□ -0.39
SHPRH-201ENST00000275233 THEMIS2Q5TEJ8 643 aa12.64□□□□□ -0.39
SHPRH-201ENST00000275233 BTBD8Q5XKL5 378 aa12.64□□□□□ -0.39
SHPRH-201ENST00000275233 TMEM143Q96AN5 459 aa12.64□□□□□ -0.39
SHPRH-201ENST00000275233 RMDN1Q96DB5 314 aa12.64□□□□□ -0.39
SHPRH-201ENST00000275233 C2orf40Q9H1Z8 148 aa12.64□□□□□ -0.39
SHPRH-201ENST00000275233 SUN2Q9UH99 717 aa12.64□□□□□ -0.39
SHPRH-201ENST00000275233 AGO2Q9UKV8 859 aaKnown RBP12.64□□□□□ -0.39
SHPRH-201ENST00000275233 EMSYQ7Z589 1322 aa12.64□□□□□ -0.39
SHPRH-201ENST00000275233 TTC37Q6PGP7 1564 aa12.64□□□□□ -0.39
SHPRH-201ENST00000275233 SPAG7O75391 227 aa12.63□□□□□ -0.39
SHPRH-201ENST00000275233 COPS2P61201 443 aa12.63□□□□□ -0.39
SHPRH-201ENST00000275233 SCARF1Q14162 830 aa12.63□□□□□ -0.39
SHPRH-201ENST00000275233 HEATR6Q6AI08 1181 aaKnown RBP12.63□□□□□ -0.39
SHPRH-201ENST00000275233 NFRKBQ6P4R8 1299 aa12.63□□□□□ -0.39
SHPRH-201ENST00000275233 L3MBTL1Q9Y468 752 aa12.63□□□□□ -0.39
SHPRH-201ENST00000275233 CCDC78A2IDD5 438 aa12.63□□□□□ -0.39
SHPRH-201ENST00000275233 FOXN1O15353 648 aa12.63□□□□□ -0.39
SHPRH-201ENST00000275233 E2F6O75461 281 aa12.63□□□□□ -0.39
SHPRH-201ENST00000275233 SYF2O95926 243 aaKnown RBP12.63□□□□□ -0.39
SHPRH-201ENST00000275233 YWHABP31946 246 aaKnown RBP12.63□□□□□ -0.39
SHPRH-201ENST00000275233 CLCN6P51797 869 aa12.63□□□□□ -0.39
SHPRH-201ENST00000275233 OR6P1Q8NGX9 317 aa12.63□□□□□ -0.39
SHPRH-201ENST00000275233 CCDC124Q96CT7 223 aaKnown RBP12.63□□□□□ -0.39
SHPRH-201ENST00000275233 TXLNGQ9NUQ3 528 aa12.63□□□□□ -0.39
SHPRH-201ENST00000275233 SHROOM2Q13796 1616 aa12.63□□□□□ -0.39
SHPRH-201ENST00000275233 EPM2AIP1Q7L775 607 aaPredicted RBP12.63□□□□□ -0.39
SHPRH-201ENST00000275233 PITPNM3Q9BZ71 974 aa12.63□□□□□ -0.39
SHPRH-201ENST00000275233 SCHIP1Q9P0W5 487 aaPredicted RBP12.63□□□□□ -0.39
SHPRH-201ENST00000275233 GSG1L2A8MUP6 293 aa12.63□□□□□ -0.39
SHPRH-201ENST00000275233 NMT1P30419 496 aaKnown RBP12.63□□□□□ -0.39
SHPRH-201ENST00000275233 SFNP31947 248 aa12.63□□□□□ -0.39
SHPRH-201ENST00000275233 GUCY1A2P33402 732 aa12.63□□□□□ -0.39
SHPRH-201ENST00000275233 ADCY2Q08462 1091 aa12.63□□□□□ -0.39
SHPRH-201ENST00000275233 SRRM1Q8IYB3 904 aaKnown RBP12.63□□□□□ -0.39
SHPRH-201ENST00000275233 GPD1LQ8N335 351 aa12.63□□□□□ -0.39
SHPRH-201ENST00000275233 TTC8Q8TAM2 541 aa12.63□□□□□ -0.39
SHPRH-201ENST00000275233 C1orf54Q8WWF1 131 aa12.63□□□□□ -0.39
SHPRH-201ENST00000275233 FAM84BQ96KN1 310 aaPredicted RBP12.63□□□□□ -0.39
SHPRH-201ENST00000275233 FAM20AQ96MK3 541 aa12.63□□□□□ -0.39
SHPRH-201ENST00000275233 GIPC2Q8TF65 315 aa12.63□□□□□ -0.39
SHPRH-201ENST00000275233 YIPF2Q9BWQ6 316 aa12.63□□□□□ -0.39
SHPRH-201ENST00000275233 CNOT10Q9H9A5 744 aaKnown RBP12.63□□□□□ -0.39
SHPRH-201ENST00000275233 CNOT7Q9UIV1 285 aaKnown RBP12.63□□□□□ -0.39
SHPRH-201ENST00000275233 FBXL5Q9UKA1 691 aa12.63□□□□□ -0.39
SHPRH-201ENST00000275233 CAPN11Q9UMQ6 739 aa12.63□□□□□ -0.39
SHPRH-201ENST00000275233 FARP1Q9Y4F1 1045 aaPredicted RBP12.63□□□□□ -0.39
SHPRH-201ENST00000275233 RPAP1Q9BWH6 1393 aaPredicted RBP12.63□□□□□ -0.39
SHPRH-201ENST00000275233 LGALS16A8MUM7 142 aa12.62□□□□□ -0.39
SHPRH-201ENST00000275233 ZNF157P51786 506 aaPredicted RBP12.62□□□□□ -0.39
SHPRH-201ENST00000275233 ROR1Q01973 937 aa12.62□□□□□ -0.39
SHPRH-201ENST00000275233 EFHC2Q5JST6 749 aa12.62□□□□□ -0.39
SHPRH-201ENST00000275233 GJD4Q96KN9 370 aaPredicted RBP12.62□□□□□ -0.39
SHPRH-201ENST00000275233 SERPINI1Q99574 410 aa12.62□□□□□ -0.39
SHPRH-201ENST00000275233 CASS4Q9NQ75 786 aa12.62□□□□□ -0.39
SHPRH-201ENST00000275233 MID2Q9UJV3 735 aa12.62□□□□□ -0.39
SHPRH-201ENST00000275233 POLRMTO00411 1230 aaKnown RBP12.62□□□□□ -0.39
SHPRH-201ENST00000275233 MAPK13O15264 365 aa12.62□□□□□ -0.39
SHPRH-201ENST00000275233 KRT37O76014 449 aa12.62□□□□□ -0.39
SHPRH-201ENST00000275233 RGS7P49802 495 aa12.62□□□□□ -0.39
SHPRH-201ENST00000275233 PRAMEP78395 509 aa12.62□□□□□ -0.39
SHPRH-201ENST00000275233 FBXO41Q8TF61 875 aa12.62□□□□□ -0.39
SHPRH-201ENST00000275233 ACAP3Q96P50 834 aa12.62□□□□□ -0.39
SHPRH-201ENST00000275233 ADAM33Q9BZ11 813 aa12.62□□□□□ -0.39
SHPRH-201ENST00000275233 HDAC6Q9UBN7 1215 aa12.62□□□□□ -0.39
SHPRH-201ENST00000275233 RNF14Q9UBS8 474 aa12.62□□□□□ -0.39
SHPRH-201ENST00000275233 PTCH1Q13635 1447 aa12.62□□□□□ -0.39
SHPRH-201ENST00000275233 SPATA2LQ8IUW3 424 aaPredicted RBP12.62□□□□□ -0.39
SHPRH-201ENST00000275233 DYRK4Q9NR20 520 aa12.62□□□□□ -0.39
SHPRH-201ENST00000275233 DCTN4Q9UJW0 460 aa12.62□□□□□ -0.39
SHPRH-201ENST00000275233 STRIP2Q9ULQ0 834 aa12.62□□□□□ -0.39
SHPRH-201ENST00000275233 RRP15Q9Y3B9 282 aaKnown RBP12.62□□□□□ -0.39
SHPRH-201ENST00000275233 SERPIND1P05546 499 aa12.62□□□□□ -0.39
SHPRH-201ENST00000275233 MMEP08473 750 aa12.62□□□□□ -0.39
SHPRH-201ENST00000275233 SULT1E1P49888 294 aa12.62□□□□□ -0.39
SHPRH-201ENST00000275233 TAF11Q15544 211 aa12.62□□□□□ -0.39
SHPRH-201ENST00000275233 SYNGAP1Q96PV0 1343 aa12.62□□□□□ -0.39
SHPRH-201ENST00000275233 DIAPH2O60879 1101 aa12.62□□□□□ -0.39
SHPRH-201ENST00000275233 HSPA8P11142 646 aaKnown RBP12.62□□□□□ -0.39
SHPRH-201ENST00000275233 ACOT2P49753 483 aa12.62□□□□□ -0.39
SHPRH-201ENST00000275233 SPARCL1Q14515 664 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms