RNA–Protein interactions for RNA: ENST00000270061.11

SSBP4-201, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSBP4, Length 1,768 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-201ENST00000270061 UGCGQ16739 394 aa27.07■■□□□ 1.92
SSBP4-201ENST00000270061 CCDC186Q7Z3E2 898 aa27.07■■□□□ 1.92
SSBP4-201ENST00000270061 MYOCDQ8IZQ8 938 aa27.07■■□□□ 1.92
SSBP4-201ENST00000270061 P2RX5Q93086 422 aa27.07■■□□□ 1.92
SSBP4-201ENST00000270061 PRDM12Q9H4Q4 367 aa27.07■■□□□ 1.92
SSBP4-201ENST00000270061 SLC39A2Q9NP94 309 aa27.07■■□□□ 1.92
SSBP4-201ENST00000270061 NRBP2Q9NSY0 501 aa27.07■■□□□ 1.92
SSBP4-201ENST00000270061 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP27.07■■□□□ 1.92
SSBP4-201ENST00000270061 LRRC10BA6NIK2 292 aa27.07■■□□□ 1.92
SSBP4-201ENST00000270061 P4HBP07237 508 aaKnown RBP27.07■■□□□ 1.92
SSBP4-201ENST00000270061 SPAG1Q07617 926 aa27.07■■□□□ 1.92
SSBP4-201ENST00000270061 TTI2Q6NXR4 508 aa27.07■■□□□ 1.92
SSBP4-201ENST00000270061 FOXR2Q6PJQ5 311 aa27.07■■□□□ 1.92
SSBP4-201ENST00000270061 NOC3LQ8WTT2 800 aaKnown RBP27.07■■□□□ 1.92
SSBP4-201ENST00000270061 BHMT2Q9H2M3 363 aa27.07■■□□□ 1.92
SSBP4-201ENST00000270061 C22orf31O95567 290 aa27.06■■□□□ 1.92
SSBP4-201ENST00000270061 GIT2Q14161 759 aa27.06■■□□□ 1.92
SSBP4-201ENST00000270061 FAM117BQ6P1L5 589 aa27.06■■□□□ 1.92
SSBP4-201ENST00000270061 TSHZ1Q6ZSZ6 1077 aa27.06■■□□□ 1.92
SSBP4-201ENST00000270061 APTXQ7Z2E3 356 aaKnown RBP27.06■■□□□ 1.92
SSBP4-201ENST00000270061 GAS2L1Q99501 681 aaPredicted RBP27.06■■□□□ 1.92
SSBP4-201ENST00000270061 CELF4Q9BZC1 486 aaKnown RBP27.06■■□□□ 1.92
SSBP4-201ENST00000270061 SQORQ9Y6N5 450 aa27.06■■□□□ 1.92
SSBP4-201ENST00000270061 CENPPQ6IPU0 288 aa27.05■■□□□ 1.92
SSBP4-201ENST00000270061 KIAA0319LQ8IZA0 1049 aa27.05■■□□□ 1.92
SSBP4-201ENST00000270061 METTL13Q8N6R0 699 aa27.05■■□□□ 1.92
SSBP4-201ENST00000270061 USP38Q8NB14 1042 aa27.05■■□□□ 1.92
SSBP4-201ENST00000270061 RAD9AQ99638 391 aa27.05■■□□□ 1.92
SSBP4-201ENST00000270061 THAP9Q9H5L6 903 aa27.05■■□□□ 1.92
SSBP4-201ENST00000270061 A0A1B0GTH6 734 aa27.04■■□□□ 1.92
SSBP4-201ENST00000270061 LYPLA2O95372 231 aa27.04■■□□□ 1.92
SSBP4-201ENST00000270061 KRT18P05783 430 aaKnown RBP27.04■■□□□ 1.92
SSBP4-201ENST00000270061 PMS1P54277 932 aaKnown RBP27.04■■□□□ 1.92
SSBP4-201ENST00000270061 HSP90AA4PQ58FG1 418 aa27.04■■□□□ 1.92
SSBP4-201ENST00000270061 FAM26FQ5R3K3 315 aa27.04■■□□□ 1.92
SSBP4-201ENST00000270061 HPS3Q969F9 1004 aa27.04■■□□□ 1.92
SSBP4-201ENST00000270061 LXNQ9BS40 222 aa27.04■■□□□ 1.92
SSBP4-201ENST00000270061 ZSWIM4Q9H7M6 989 aa27.04■■□□□ 1.92
SSBP4-201ENST00000270061 KCND2Q9NZV8 630 aa27.04■■□□□ 1.92
SSBP4-201ENST00000270061 LIMA1Q9UHB6 759 aaKnown RBP27.04■■□□□ 1.92
SSBP4-201ENST00000270061 MAGEB2O15479 319 aa27.04■■□□□ 1.92
SSBP4-201ENST00000270061 NR1I3Q14994 352 aa27.04■■□□□ 1.92
SSBP4-201ENST00000270061 INTS13Q9NVM9 706 aa27.04■■□□□ 1.92
SSBP4-201ENST00000270061 WRAP73Q9P2S5 460 aaPredicted RBP27.04■■□□□ 1.92
SSBP4-201ENST00000270061 TTC3P53804 2025 aa27.04■■□□□ 1.92
SSBP4-201ENST00000270061 NPHP3-ACAD11A0A0J9YXS1 232 aa27.03■■□□□ 1.92
SSBP4-201ENST00000270061 LOC101059915A0A1B0GWI6 518 aaPredicted RBP27.03■■□□□ 1.92
SSBP4-201ENST00000270061 TRIM49BA6NDI0 452 aa27.03■■□□□ 1.92
SSBP4-201ENST00000270061 MSNP26038 577 aaKnown RBP27.03■■□□□ 1.92
SSBP4-201ENST00000270061 GSDMDP57764 484 aa27.03■■□□□ 1.92
SSBP4-201ENST00000270061 TAP1Q03518 808 aa27.03■■□□□ 1.92
SSBP4-201ENST00000270061 RINT1Q6NUQ1 792 aa27.03■■□□□ 1.92
SSBP4-201ENST00000270061 VSTM4Q8IW00 320 aa27.03■■□□□ 1.92
SSBP4-201ENST00000270061 MAFAQ8NHW3 353 aaPredicted RBP27.03■■□□□ 1.92
SSBP4-201ENST00000270061 DUSP9Q99956 384 aaKnown RBP27.03■■□□□ 1.92
SSBP4-201ENST00000270061 AGO3Q9H9G7 860 aaKnown RBP27.03■■□□□ 1.92
SSBP4-201ENST00000270061 GINS2Q9Y248 185 aa27.03■■□□□ 1.92
SSBP4-201ENST00000270061 LCHNA4D1U4 455 aa27.02■■□□□ 1.92
SSBP4-201ENST00000270061 CD52P31358 61 aa27.02■■□□□ 1.92
SSBP4-201ENST00000270061 C1orf186Q6ZWK4 172 aa27.02■■□□□ 1.92
SSBP4-201ENST00000270061 PIGOQ8TEQ8 1089 aa27.02■■□□□ 1.92
SSBP4-201ENST00000270061 INSL6Q9Y581 213 aa27.02■■□□□ 1.92
SSBP4-201ENST00000270061 QARSP47897 775 aaKnown RBP27.02■■□□□ 1.92
SSBP4-201ENST00000270061 XKR3Q5GH77 459 aa27.02■■□□□ 1.92
SSBP4-201ENST00000270061 HERC4Q5GLZ8 1057 aaPredicted RBP27.02■■□□□ 1.92
SSBP4-201ENST00000270061 TCP11X2Q5H9J9 407 aa27.02■■□□□ 1.92
SSBP4-201ENST00000270061 ANKRD40Q6AI12 368 aa27.02■■□□□ 1.92
SSBP4-201ENST00000270061 BANK1Q8NDB2 785 aa27.02■■□□□ 1.92
SSBP4-201ENST00000270061 TOP1MTQ969P6 601 aa27.02■■□□□ 1.92
SSBP4-201ENST00000270061 ZNF830Q96NB3 372 aaPredicted RBP27.02■■□□□ 1.92
SSBP4-201ENST00000270061 REEP2Q9BRK0 252 aa27.02■■□□□ 1.92
SSBP4-201ENST00000270061 RUSC1Q9BVN2 902 aa27.02■■□□□ 1.92
SSBP4-201ENST00000270061 KCNF1Q9H3M0 494 aa27.02■■□□□ 1.92
SSBP4-201ENST00000270061 SEPT9Q9UHD8 586 aaPredicted RBP27.02■■□□□ 1.92
SSBP4-201ENST00000270061 ARHGEF15O94989 841 aa27.01■■□□□ 1.91
SSBP4-201ENST00000270061 TMOD1P28289 359 aa27.01■■□□□ 1.91
SSBP4-201ENST00000270061 PSMC5P62195 406 aa27.01■■□□□ 1.91
SSBP4-201ENST00000270061 EFCAB12Q6NXP0 572 aa27.01■■□□□ 1.91
SSBP4-201ENST00000270061 TMC6Q7Z403 805 aa27.01■■□□□ 1.91
SSBP4-201ENST00000270061 IRF2BP1Q8IU81 584 aa27.01■■□□□ 1.91
SSBP4-201ENST00000270061 ANKRD20A12PQ8NF67 263 aa27.01■■□□□ 1.91
SSBP4-201ENST00000270061 CERS4Q9HA82 394 aa27.01■■□□□ 1.91
SSBP4-201ENST00000270061 UPP2O95045 317 aa27■■□□□ 1.91
SSBP4-201ENST00000270061 KIF20AO95235 890 aa27■■□□□ 1.91
SSBP4-201ENST00000270061 TBC1D8BQ0IIM8 1120 aa27■■□□□ 1.91
SSBP4-201ENST00000270061 PAK2Q13177 524 aa27■■□□□ 1.91
SSBP4-201ENST00000270061 FILIP1LQ4L180 1135 aa27■■□□□ 1.91
SSBP4-201ENST00000270061 SRRTQ9BXP5 876 aaKnown RBP27■■□□□ 1.91
SSBP4-201ENST00000270061 DBR1Q9UK59 544 aaKnown RBP27■■□□□ 1.91
SSBP4-201ENST00000270061 PADI3Q9ULW8 664 aa27■■□□□ 1.91
SSBP4-201ENST00000270061 KCNJ18B7U540 433 aa26.99■■□□□ 1.91
SSBP4-201ENST00000270061 EEF1GP26641 437 aaKnown RBP26.99■■□□□ 1.91
SSBP4-201ENST00000270061 CLCN3P51790 818 aa26.99■■□□□ 1.91
SSBP4-201ENST00000270061 LRRC63Q05C16 580 aa26.99■■□□□ 1.91
SSBP4-201ENST00000270061 KCNJ12Q14500 433 aa26.99■■□□□ 1.91
SSBP4-201ENST00000270061 FILIP1Q7Z7B0 1213 aa26.99■■□□□ 1.91
SSBP4-201ENST00000270061 C4orf19Q8IY42 314 aa26.99■■□□□ 1.91
SSBP4-201ENST00000270061 CSGALNACT2Q8N6G5 542 aa26.99■■□□□ 1.91
SSBP4-201ENST00000270061 MAP7D2Q96T17 732 aa26.99■■□□□ 1.91
SSBP4-201ENST00000270061 FTHL17Q9BXU8 183 aa26.99■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms