RNA–Protein interactions for RNA: ENST00000269217.10

LAMA3-201, Transcript of laminin subunit alpha 3, humanhuman

TSL 1 (best) BASIC

Gene LAMA3, Length 5,671 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA3-201ENST00000269217 TTC39CQ8N584 583 aa10.88□□□□□ -0.67
LAMA3-201ENST00000269217 GIPC2Q8TF65 315 aa10.88□□□□□ -0.67
LAMA3-201ENST00000269217 PSPC1Q8WXF1 523 aaKnown RBP10.88□□□□□ -0.67
LAMA3-201ENST00000269217 NRBF2Q96F24 287 aa10.88□□□□□ -0.67
LAMA3-201ENST00000269217 CHMP6Q96FZ7 201 aa10.88□□□□□ -0.67
LAMA3-201ENST00000269217 ZNF302Q9NR11 478 aa10.88□□□□□ -0.67
LAMA3-201ENST00000269217 ANKRD65E5RJM6 399 aa10.88□□□□□ -0.67
LAMA3-201ENST00000269217 F8W8V4 182 aa10.88□□□□□ -0.67
LAMA3-201ENST00000269217 C12orf60Q5U649 245 aa10.88□□□□□ -0.67
LAMA3-201ENST00000269217 E4F1Q66K89 784 aaPredicted RBP10.88□□□□□ -0.67
LAMA3-201ENST00000269217 ZNF746Q6NUN9 644 aaPredicted RBP10.88□□□□□ -0.67
LAMA3-201ENST00000269217 NBPF10Q6P3W6 841 aaKnown RBP10.88□□□□□ -0.67
LAMA3-201ENST00000269217 ACAD11Q709F0 780 aa10.88□□□□□ -0.67
LAMA3-201ENST00000269217 CXorf38Q8TB03 319 aa10.88□□□□□ -0.67
LAMA3-201ENST00000269217 PIP4K2CQ8TBX8 421 aa10.88□□□□□ -0.67
LAMA3-201ENST00000269217 SCG3Q8WXD2 468 aaKnown RBP10.88□□□□□ -0.67
LAMA3-201ENST00000269217 LRRC37BQ96QE4 947 aa10.88□□□□□ -0.67
LAMA3-201ENST00000269217 GCOM2Q9BZD3 368 aaPredicted RBP10.88□□□□□ -0.67
LAMA3-201ENST00000269217 STOML1Q9UBI4 398 aa10.88□□□□□ -0.67
LAMA3-201ENST00000269217 FBXL5Q9UKA1 691 aa10.88□□□□□ -0.67
LAMA3-201ENST00000269217 TTC7AQ9ULT0 858 aaPredicted RBP10.88□□□□□ -0.67
LAMA3-201ENST00000269217 HEY1Q9Y5J3 304 aa10.88□□□□□ -0.67
LAMA3-201ENST00000269217 ABCA6Q8N139 1617 aa10.88□□□□□ -0.67
LAMA3-201ENST00000269217 CRB1P82279 1406 aa10.88□□□□□ -0.67
LAMA3-201ENST00000269217 KRT14P02533 472 aa10.88□□□□□ -0.67
LAMA3-201ENST00000269217 SDC4P31431 198 aa10.88□□□□□ -0.67
LAMA3-201ENST00000269217 POLE2P56282 527 aa10.88□□□□□ -0.67
LAMA3-201ENST00000269217 DPYDQ12882 1025 aa10.88□□□□□ -0.67
LAMA3-201ENST00000269217 ZNF772Q68DY9 489 aaPredicted RBP10.88□□□□□ -0.67
LAMA3-201ENST00000269217 RWDD4Q6NW29 188 aaKnown RBP10.88□□□□□ -0.67
LAMA3-201ENST00000269217 ADSSL1Q8N142 457 aa10.88□□□□□ -0.67
LAMA3-201ENST00000269217 DACT3Q96B18 629 aaPredicted RBP10.88□□□□□ -0.67
LAMA3-201ENST00000269217 TGS1Q96RS0 853 aaKnown RBP10.88□□□□□ -0.67
LAMA3-201ENST00000269217 CYTH2Q99418 400 aa10.88□□□□□ -0.67
LAMA3-201ENST00000269217 XAB2Q9HCS7 855 aaKnown RBP10.88□□□□□ -0.67
LAMA3-201ENST00000269217 RNF146Q9NTX7 359 aa10.88□□□□□ -0.67
LAMA3-201ENST00000269217 EMSYQ7Z589 1322 aa10.87□□□□□ -0.67
LAMA3-201ENST00000269217 ECE2O60344 883 aa10.87□□□□□ -0.67
LAMA3-201ENST00000269217 SRGNP10124 158 aa10.87□□□□□ -0.67
LAMA3-201ENST00000269217 VSNL1P62760 191 aa10.87□□□□□ -0.67
LAMA3-201ENST00000269217 GPS1Q13098 491 aa10.87□□□□□ -0.67
LAMA3-201ENST00000269217 EPHA7Q15375 998 aa10.87□□□□□ -0.67
LAMA3-201ENST00000269217 SNRNP48Q6IEG0 339 aaKnown RBP10.87□□□□□ -0.67
LAMA3-201ENST00000269217 KIAA1841Q6NSI8 718 aa10.87□□□□□ -0.67
LAMA3-201ENST00000269217 RASGRP2Q7LDG7 609 aa10.87□□□□□ -0.67
LAMA3-201ENST00000269217 ATP11CQ8NB49 1132 aa10.87□□□□□ -0.67
LAMA3-201ENST00000269217 GRAMD1AQ96CP6 724 aa10.87□□□□□ -0.67
LAMA3-201ENST00000269217 FAM49AQ9H0Q0 323 aaPredicted RBP10.87□□□□□ -0.67
LAMA3-201ENST00000269217 KIF9Q9HAQ2 790 aa10.87□□□□□ -0.67
LAMA3-201ENST00000269217 TUFT1Q9NNX1 390 aa10.87□□□□□ -0.67
LAMA3-201ENST00000269217 ZCCHC17Q9NP64 241 aaKnown RBP10.87□□□□□ -0.67
LAMA3-201ENST00000269217 GOLGA8MH3BSY2 632 aa10.87□□□□□ -0.67
LAMA3-201ENST00000269217 EEF1B2P24534 225 aaKnown RBP10.87□□□□□ -0.67
LAMA3-201ENST00000269217 AP3M2P53677 418 aa10.87□□□□□ -0.67
LAMA3-201ENST00000269217 TAP1Q03518 808 aa10.87□□□□□ -0.67
LAMA3-201ENST00000269217 GPD1LQ8N335 351 aa10.87□□□□□ -0.67
LAMA3-201ENST00000269217 FBXL13Q8NEE6 735 aa10.87□□□□□ -0.67
LAMA3-201ENST00000269217 VIPAS39Q9H9C1 493 aa10.87□□□□□ -0.67
LAMA3-201ENST00000269217 GABBR1Q9UBS5 961 aa10.87□□□□□ -0.67
LAMA3-201ENST00000269217 TUBE1Q9UJT0 475 aa10.87□□□□□ -0.67
LAMA3-201ENST00000269217 TNS3Q68CZ2 1445 aa10.87□□□□□ -0.67
LAMA3-201ENST00000269217 CFAP73A6NFT4 308 aa10.87□□□□□ -0.67
LAMA3-201ENST00000269217 SPDYE2BA6NHP3 402 aa10.87□□□□□ -0.67
LAMA3-201ENST00000269217 FAM196BA6NMK8 535 aa10.87□□□□□ -0.67
LAMA3-201ENST00000269217 NBPF26B4DH59 902 aa10.87□□□□□ -0.67
LAMA3-201ENST00000269217 SPDYE6P0CI01 402 aa10.87□□□□□ -0.67
LAMA3-201ENST00000269217 SMARCA1P28370 1054 aa10.87□□□□□ -0.67
LAMA3-201ENST00000269217 ARPP19P56211 112 aa10.87□□□□□ -0.67
LAMA3-201ENST00000269217 NBPF15Q8N660 670 aa10.87□□□□□ -0.67
LAMA3-201ENST00000269217 IGDCC4Q8TDY8 1250 aa10.87□□□□□ -0.67
LAMA3-201ENST00000269217 AGPAT1Q99943 283 aa10.87□□□□□ -0.67
LAMA3-201ENST00000269217 SUN2Q9UH99 717 aa10.87□□□□□ -0.67
LAMA3-201ENST00000269217 SSU72P8A0A1W2PR75 194 aa10.87□□□□□ -0.67
LAMA3-201ENST00000269217 TRIM49P0CI25 452 aa10.87□□□□□ -0.67
LAMA3-201ENST00000269217 TRIM49CP0CI26 452 aa10.87□□□□□ -0.67
LAMA3-201ENST00000269217 FDX1P10109 184 aa10.87□□□□□ -0.67
LAMA3-201ENST00000269217 PYGBP11216 843 aa10.87□□□□□ -0.67
LAMA3-201ENST00000269217 COPS2P61201 443 aa10.87□□□□□ -0.67
LAMA3-201ENST00000269217 PSMC1P62191 440 aaKnown RBP10.87□□□□□ -0.67
LAMA3-201ENST00000269217 YWHAHQ04917 246 aaPredicted RBP10.87□□□□□ -0.67
LAMA3-201ENST00000269217 MKRN3Q13064 507 aaKnown RBP10.87□□□□□ -0.67
LAMA3-201ENST00000269217 RNPC3Q96LT9 517 aaKnown RBP10.87□□□□□ -0.67
LAMA3-201ENST00000269217 C7orf25Q9BPX7 421 aa10.87□□□□□ -0.67
LAMA3-201ENST00000269217 SUDS3Q9H7L9 328 aaPredicted RBP10.87□□□□□ -0.67
LAMA3-201ENST00000269217 POLD4Q9HCU8 107 aa10.87□□□□□ -0.67
LAMA3-201ENST00000269217 MRPL40Q9NQ50 206 aaKnown RBP10.87□□□□□ -0.67
LAMA3-201ENST00000269217 TRIM33Q9UPN9 1127 aa10.87□□□□□ -0.67
LAMA3-201ENST00000269217 FNDC3AQ9Y2H6 1198 aaKnown RBP10.87□□□□□ -0.67
LAMA3-201ENST00000269217 OVOS2A0A0G2JMS6 1433 aa10.87□□□□□ -0.67
LAMA3-201ENST00000269217 OVOS2A0A0J9YW53 1432 aa10.87□□□□□ -0.67
LAMA3-201ENST00000269217 OVOS2Q6IE36 1432 aa10.87□□□□□ -0.67
LAMA3-201ENST00000269217 FOXP2O15409 715 aa10.87□□□□□ -0.67
LAMA3-201ENST00000269217 SLC26A4O43511 780 aa10.87□□□□□ -0.67
LAMA3-201ENST00000269217 FMR1Q06787 632 aaKnown RBP eCLIP10.87□□□□□ -0.67
LAMA3-201ENST00000269217 PDIA2Q13087 525 aaKnown RBP10.87□□□□□ -0.67
LAMA3-201ENST00000269217 ARHGEF6Q15052 776 aa10.87□□□□□ -0.67
LAMA3-201ENST00000269217 KIF19Q2TAC6 998 aa10.87□□□□□ -0.67
LAMA3-201ENST00000269217 SEPT12Q8IYM1 358 aa10.87□□□□□ -0.67
LAMA3-201ENST00000269217 BEST2Q8NFU1 509 aa10.87□□□□□ -0.67
LAMA3-201ENST00000269217 MRPL4Q9BYD3 311 aaKnown RBP10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms