RNA–Protein interactions for RNA: ENST00000267838.6

LYSMD2-201, Transcript of LysM domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LYSMD2, Length 1,759 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2-201ENST00000267838 IER5Q5VY09 327 aa22.4■■□□□ 1.18
LYSMD2-201ENST00000267838 TCP11Q8WWU5 503 aa22.4■■□□□ 1.18
LYSMD2-201ENST00000267838 SYN2Q92777 582 aaPredicted RBP22.4■■□□□ 1.18
LYSMD2-201ENST00000267838 CCDC102AQ96A19 550 aa22.4■■□□□ 1.18
LYSMD2-201ENST00000267838 ERAP1Q9NZ08 941 aa22.4■■□□□ 1.18
LYSMD2-201ENST00000267838 IGKV6-21A0A0C4DH24 114 aa22.4■■□□□ 1.18
LYSMD2-201ENST00000267838 GOLGA8IPA6NC78 632 aa22.4■■□□□ 1.18
LYSMD2-201ENST00000267838 GOLGA8JA6NMD2 632 aa22.4■■□□□ 1.18
LYSMD2-201ENST00000267838 SREBF2Q12772 1141 aa22.4■■□□□ 1.18
LYSMD2-201ENST00000267838 DRP2Q13474 957 aa22.4■■□□□ 1.18
LYSMD2-201ENST00000267838 SFMBT2Q5VUG0 894 aa22.4■■□□□ 1.18
LYSMD2-201ENST00000267838 AFG1LQ8WV93 481 aa22.4■■□□□ 1.18
LYSMD2-201ENST00000267838 POMGNT1Q8WZA1 660 aa22.4■■□□□ 1.18
LYSMD2-201ENST00000267838 ZFYVE28Q9HCC9 887 aa22.4■■□□□ 1.18
LYSMD2-201ENST00000267838 ARGLU1Q9NWB6 273 aaPredicted RBP22.4■■□□□ 1.18
LYSMD2-201ENST00000267838 FAM53CQ9NYF3 392 aa22.4■■□□□ 1.18
LYSMD2-201ENST00000267838 ARHGAP20Q9P2F6 1191 aa22.4■■□□□ 1.18
LYSMD2-201ENST00000267838 ZHX1Q9UKY1 873 aaPredicted RBP22.4■■□□□ 1.18
LYSMD2-201ENST00000267838 UCHL3P15374 230 aa22.39■■□□□ 1.17
LYSMD2-201ENST00000267838 SMPD1P17405 629 aa22.39■■□□□ 1.17
LYSMD2-201ENST00000267838 GARTP22102 1010 aa22.39■■□□□ 1.17
LYSMD2-201ENST00000267838 CAPSQ13938 189 aa22.39■■□□□ 1.17
LYSMD2-201ENST00000267838 DUSP28Q4G0W2 176 aa22.39■■□□□ 1.17
LYSMD2-201ENST00000267838 CBWD6Q4V339 395 aa22.39■■□□□ 1.17
LYSMD2-201ENST00000267838 CBWD3Q5JTY5 395 aa22.39■■□□□ 1.17
LYSMD2-201ENST00000267838 CBWD5Q5RIA9 395 aa22.39■■□□□ 1.17
LYSMD2-201ENST00000267838 MNS1Q8NEH6 495 aa22.39■■□□□ 1.17
LYSMD2-201ENST00000267838 PRPF31Q8WWY3 499 aaKnown RBP22.39■■□□□ 1.17
LYSMD2-201ENST00000267838 SAAL1Q96ER3 474 aa22.39■■□□□ 1.17
LYSMD2-201ENST00000267838 JPH2Q9BR39 696 aaPredicted RBP22.39■■□□□ 1.17
LYSMD2-201ENST00000267838 SUGCTQ9HAC7 445 aa22.39■■□□□ 1.17
LYSMD2-201ENST00000267838 SIX2Q9NPC8 291 aa22.39■■□□□ 1.17
LYSMD2-201ENST00000267838 FBXL5Q9UKA1 691 aa22.39■■□□□ 1.17
LYSMD2-201ENST00000267838 ABT1Q9ULW3 272 aaKnown RBP22.39■■□□□ 1.17
LYSMD2-201ENST00000267838 REXO2Q9Y3B8 237 aaKnown RBP22.39■■□□□ 1.17
LYSMD2-201ENST00000267838 A0A0U1RQJ8 604 aa22.38■■□□□ 1.17
LYSMD2-201ENST00000267838 K7ERI5 159 aa22.38■■□□□ 1.17
LYSMD2-201ENST00000267838 ADRB2P07550 413 aa22.38■■□□□ 1.17
LYSMD2-201ENST00000267838 LIG4P49917 911 aa22.38■■□□□ 1.17
LYSMD2-201ENST00000267838 DLG4P78352 724 aa22.38■■□□□ 1.17
LYSMD2-201ENST00000267838 MYL7Q01449 175 aa22.38■■□□□ 1.17
LYSMD2-201ENST00000267838 SNRNP35Q16560 246 aaKnown RBP22.38■■□□□ 1.17
LYSMD2-201ENST00000267838 IQSEC1Q6DN90 963 aa22.38■■□□□ 1.17
LYSMD2-201ENST00000267838 CBWD2Q8IUF1 395 aa22.38■■□□□ 1.17
LYSMD2-201ENST00000267838 ATRIPQ8WXE1 791 aa22.38■■□□□ 1.17
LYSMD2-201ENST00000267838 CCDC42Q96M95 316 aa22.38■■□□□ 1.17
LYSMD2-201ENST00000267838 TMEM134Q9H6X4 195 aa22.38■■□□□ 1.17
LYSMD2-201ENST00000267838 LZTFL1Q9NQ48 299 aa22.38■■□□□ 1.17
LYSMD2-201ENST00000267838 EIF3CLB5ME19 914 aaKnown RBP22.38■■□□□ 1.17
LYSMD2-201ENST00000267838 KIF3CO14782 793 aa22.38■■□□□ 1.17
LYSMD2-201ENST00000267838 PLEKP08567 350 aaPredicted RBP22.38■■□□□ 1.17
LYSMD2-201ENST00000267838 MCCD1P59942 119 aaPredicted RBP22.38■■□□□ 1.17
LYSMD2-201ENST00000267838 MKRN4PQ13434 485 aaPredicted RBP22.38■■□□□ 1.17
LYSMD2-201ENST00000267838 BMS1Q14692 1282 aaKnown RBP22.38■■□□□ 1.17
LYSMD2-201ENST00000267838 UBXN4Q92575 508 aa22.38■■□□□ 1.17
LYSMD2-201ENST00000267838 FBXL18Q96ME1 805 aa22.38■■□□□ 1.17
LYSMD2-201ENST00000267838 EIF3CQ99613 913 aaKnown RBP22.38■■□□□ 1.17
LYSMD2-201ENST00000267838 RNPEPQ9H4A4 650 aa22.38■■□□□ 1.17
LYSMD2-201ENST00000267838 FHOD1Q9Y613 1164 aa22.38■■□□□ 1.17
LYSMD2-201ENST00000267838 DOCK3Q8IZD9 2030 aa22.37■■□□□ 1.17
LYSMD2-201ENST00000267838 ADCY3O60266 1144 aa22.37■■□□□ 1.17
LYSMD2-201ENST00000267838 N4BP1O75113 896 aaKnown RBP22.37■■□□□ 1.17
LYSMD2-201ENST00000267838 PIGRP01833 764 aa22.37■■□□□ 1.17
LYSMD2-201ENST00000267838 HOXC6P09630 235 aa22.37■■□□□ 1.17
LYSMD2-201ENST00000267838 FAM193AP78312 1265 aa22.37■■□□□ 1.17
LYSMD2-201ENST00000267838 KRT83P78385 493 aa22.37■■□□□ 1.17
LYSMD2-201ENST00000267838 RAPGEF1Q13905 1077 aa22.37■■□□□ 1.17
LYSMD2-201ENST00000267838 ERCC6LQ2NKX8 1250 aa22.37■■□□□ 1.17
LYSMD2-201ENST00000267838 LRRC71Q8N4P6 559 aa22.37■■□□□ 1.17
LYSMD2-201ENST00000267838 SMC1BQ8NDV3 1235 aa22.37■■□□□ 1.17
LYSMD2-201ENST00000267838 PLEKHO2Q8TD55 490 aa22.37■■□□□ 1.17
LYSMD2-201ENST00000267838 TRAPPC12Q8WVT3 735 aa22.37■■□□□ 1.17
LYSMD2-201ENST00000267838 PSPC1Q8WXF1 523 aaKnown RBP22.37■■□□□ 1.17
LYSMD2-201ENST00000267838 EFCAB8A8MWE9 144 aa22.36■■□□□ 1.17
LYSMD2-201ENST00000267838 PPFIA4O75335 1185 aa22.36■■□□□ 1.17
LYSMD2-201ENST00000267838 EIF4A3P38919 411 aaKnown RBP22.36■■□□□ 1.17
LYSMD2-201ENST00000267838 MXD4Q14582 209 aaPredicted RBP22.36■■□□□ 1.17
LYSMD2-201ENST00000267838 ZNF484Q5JVG2 852 aa22.36■■□□□ 1.17
LYSMD2-201ENST00000267838 C1orf220Q5T0J3 134 aa22.36■■□□□ 1.17
LYSMD2-201ENST00000267838 HGSNATQ68CP4 663 aa22.36■■□□□ 1.17
LYSMD2-201ENST00000267838 GPD1LQ8N335 351 aa22.36■■□□□ 1.17
LYSMD2-201ENST00000267838 OR6J1Q8NGC5 347 aa22.36■■□□□ 1.17
LYSMD2-201ENST00000267838 USP6NLQ92738 828 aa22.36■■□□□ 1.17
LYSMD2-201ENST00000267838 AIPL1Q9NZN9 384 aa22.36■■□□□ 1.17
LYSMD2-201ENST00000267838 P4HA2O15460 535 aa22.35■■□□□ 1.17
LYSMD2-201ENST00000267838 URI1O94763 535 aaPredicted RBP22.35■■□□□ 1.17
LYSMD2-201ENST00000267838 IPO7O95373 1038 aaKnown RBP22.35■■□□□ 1.17
LYSMD2-201ENST00000267838 SERPING1P05155 500 aa22.35■■□□□ 1.17
LYSMD2-201ENST00000267838 CASQ1P31415 396 aa22.35■■□□□ 1.17
LYSMD2-201ENST00000267838 PPP3CAQ08209 521 aa22.35■■□□□ 1.17
LYSMD2-201ENST00000267838 LAMTOR4Q0VGL1 99 aa22.35■■□□□ 1.17
LYSMD2-201ENST00000267838 CRHR2Q13324 411 aa22.35■■□□□ 1.17
LYSMD2-201ENST00000267838 MAPK8IP2Q13387 824 aaPredicted RBP22.35■■□□□ 1.17
LYSMD2-201ENST00000267838 SLC9C1Q4G0N8 1177 aa22.35■■□□□ 1.17
LYSMD2-201ENST00000267838 ARHGAP29Q52LW3 1261 aa22.35■■□□□ 1.17
LYSMD2-201ENST00000267838 GPIHBP1Q8IV16 184 aa22.35■■□□□ 1.17
LYSMD2-201ENST00000267838 SPAG5Q96R06 1193 aa22.35■■□□□ 1.17
LYSMD2-201ENST00000267838 INTS2Q9H0H0 1204 aaKnown RBP22.35■■□□□ 1.17
LYSMD2-201ENST00000267838 DEF6Q9H4E7 631 aa22.35■■□□□ 1.17
LYSMD2-201ENST00000267838 MYO6Q9UM54 1294 aa22.35■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms