RNA–Protein interactions for RNA: ENST00000266661.8

BEST3-201, Transcript of bestrophin 3, humanhuman

TSL 1 (best) BASIC

Gene BEST3, Length 1,876 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-201ENST00000266661 MEFVO15553 781 aaPredicted RBP13.46□□□□□ -0.25
BEST3-201ENST00000266661 CCDC172P0C7W6 258 aa13.46□□□□□ -0.25
BEST3-201ENST00000266661 BCRP11274 1271 aa13.46□□□□□ -0.25
BEST3-201ENST00000266661 TNFAIP3P21580 790 aa13.46□□□□□ -0.25
BEST3-201ENST00000266661 CTNNA1P35221 906 aaKnown RBP13.46□□□□□ -0.25
BEST3-201ENST00000266661 PTGIRP43119 386 aa13.46□□□□□ -0.25
BEST3-201ENST00000266661 DLG4P78352 724 aa13.46□□□□□ -0.25
BEST3-201ENST00000266661 PPP2R5EQ16537 467 aa13.46□□□□□ -0.25
BEST3-201ENST00000266661 RUFY4Q6ZNE9 571 aa13.46□□□□□ -0.25
BEST3-201ENST00000266661 MICALL2Q8IY33 904 aa13.46□□□□□ -0.25
BEST3-201ENST00000266661 C3orf20Q8ND61 904 aa13.46□□□□□ -0.25
BEST3-201ENST00000266661 NEK9Q8TD19 979 aa13.46□□□□□ -0.25
BEST3-201ENST00000266661 BBXQ8WY36 941 aaPredicted RBP13.46□□□□□ -0.25
BEST3-201ENST00000266661 TLCD1Q96CP7 247 aa13.46□□□□□ -0.25
BEST3-201ENST00000266661 GMLQ99445 158 aa13.46□□□□□ -0.25
BEST3-201ENST00000266661 LXNQ9BS40 222 aa13.46□□□□□ -0.25
BEST3-201ENST00000266661 TRIM51Q9BSJ1 452 aa13.46□□□□□ -0.25
BEST3-201ENST00000266661 ZNF577Q9BSK1 485 aa13.46□□□□□ -0.25
BEST3-201ENST00000266661 ARHGEF10LQ9HCE6 1279 aa13.46□□□□□ -0.25
BEST3-201ENST00000266661 MRPL11Q9Y3B7 192 aaKnown RBP13.46□□□□□ -0.25
BEST3-201ENST00000266661 PCNTO95613 3336 aa13.46□□□□□ -0.25
BEST3-201ENST00000266661 ASTN2O75129 1339 aaPredicted RBP13.46□□□□□ -0.25
BEST3-201ENST00000266661 FAM187AA6NFU0 413 aa13.46□□□□□ -0.26
BEST3-201ENST00000266661 DHX15O43143 795 aaKnown RBP13.46□□□□□ -0.26
BEST3-201ENST00000266661 MTA2O94776 668 aa13.46□□□□□ -0.26
BEST3-201ENST00000266661 HSD17B4P51659 736 aa13.46□□□□□ -0.26
BEST3-201ENST00000266661 UBXN2AP68543 259 aa13.46□□□□□ -0.26
BEST3-201ENST00000266661 SETQ01105 290 aaPredicted RBP13.46□□□□□ -0.26
BEST3-201ENST00000266661 PPP3CAQ08209 521 aa13.46□□□□□ -0.26
BEST3-201ENST00000266661 KCTD19Q17RG1 926 aaPredicted RBP13.46□□□□□ -0.26
BEST3-201ENST00000266661 TBC1D10BQ4KMP7 808 aaPredicted RBP13.46□□□□□ -0.26
BEST3-201ENST00000266661 C11orf63Q6NUN7 778 aa13.46□□□□□ -0.26
BEST3-201ENST00000266661 ZDHHC24Q6UX98 284 aa13.46□□□□□ -0.26
BEST3-201ENST00000266661 ARHGEF19Q8IW93 802 aa13.46□□□□□ -0.26
BEST3-201ENST00000266661 ZDHHC14Q8IZN3 488 aa13.46□□□□□ -0.26
BEST3-201ENST00000266661 PLEKHO2Q8TD55 490 aa13.46□□□□□ -0.26
BEST3-201ENST00000266661 SLC20A1Q8WUM9 679 aa13.46□□□□□ -0.26
BEST3-201ENST00000266661 VTI1AQ96AJ9 217 aa13.46□□□□□ -0.26
BEST3-201ENST00000266661 MXRA8Q9BRK3 442 aa13.46□□□□□ -0.26
BEST3-201ENST00000266661 ERP44Q9BS26 406 aa13.46□□□□□ -0.26
BEST3-201ENST00000266661 TEKT3Q9BXF9 490 aa13.46□□□□□ -0.26
BEST3-201ENST00000266661 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.46□□□□□ -0.26
BEST3-201ENST00000266661 GPBP1L1Q9HC44 474 aaPredicted RBP13.46□□□□□ -0.26
BEST3-201ENST00000266661 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.46□□□□□ -0.26
BEST3-201ENST00000266661 GPRC5DQ9NZD1 345 aa13.46□□□□□ -0.26
BEST3-201ENST00000266661 PCDHA3Q9Y5H8 950 aa13.46□□□□□ -0.26
BEST3-201ENST00000266661 C5orf60A6NFR6 353 aa13.45□□□□□ -0.26
BEST3-201ENST00000266661 IPO5O00410 1097 aaKnown RBP13.45□□□□□ -0.26
BEST3-201ENST00000266661 TRAPPC3O43617 180 aa13.45□□□□□ -0.26
BEST3-201ENST00000266661 LRRN2O75325 713 aa13.45□□□□□ -0.26
BEST3-201ENST00000266661 FSBPO95073 299 aa13.45□□□□□ -0.26
BEST3-201ENST00000266661 ALAS1P13196 640 aa13.45□□□□□ -0.26
BEST3-201ENST00000266661 CHRNB2P17787 502 aa13.45□□□□□ -0.26
BEST3-201ENST00000266661 ITGB5P18084 799 aa13.45□□□□□ -0.26
BEST3-201ENST00000266661 ABCB4P21439 1286 aa13.45□□□□□ -0.26
BEST3-201ENST00000266661 LIG3P49916 1009 aa13.45□□□□□ -0.26
BEST3-201ENST00000266661 PEX5P50542 639 aa13.45□□□□□ -0.26
BEST3-201ENST00000266661 HIRAP54198 1017 aaPredicted RBP13.45□□□□□ -0.26
BEST3-201ENST00000266661 GHRHRQ02643 423 aa13.45□□□□□ -0.26
BEST3-201ENST00000266661 CCDC174Q6PII3 467 aa13.45□□□□□ -0.26
BEST3-201ENST00000266661 RHOT2Q8IXI1 618 aa13.45□□□□□ -0.26
BEST3-201ENST00000266661 TRPM4Q8TD43 1214 aa13.45□□□□□ -0.26
BEST3-201ENST00000266661 CHURC1Q8WUH1 139 aa13.45□□□□□ -0.26
BEST3-201ENST00000266661 HOOK2Q96ED9 719 aa13.45□□□□□ -0.26
BEST3-201ENST00000266661 ST6GALNAC4Q9H4F1 302 aa13.45□□□□□ -0.26
BEST3-201ENST00000266661 VCPKMTQ9H867 229 aa13.45□□□□□ -0.26
BEST3-201ENST00000266661 ZBTB21Q9ULJ3 1066 aa13.45□□□□□ -0.26
BEST3-201ENST00000266661 UTP11Q9Y3A2 253 aaKnown RBP13.45□□□□□ -0.26
BEST3-201ENST00000266661 ALG6Q9Y672 507 aa13.45□□□□□ -0.26
BEST3-201ENST00000266661 CNTNAP1P78357 1384 aa13.45□□□□□ -0.26
BEST3-201ENST00000266661 GOLGA6L10A6NI86 522 aa13.44□□□□□ -0.26
BEST3-201ENST00000266661 KIAA0391O15091 583 aaKnown RBP13.44□□□□□ -0.26
BEST3-201ENST00000266661 MAPK13O15264 365 aa13.44□□□□□ -0.26
BEST3-201ENST00000266661 EXOC3O60645 756 aa13.44□□□□□ -0.26
BEST3-201ENST00000266661 ERLIN2O94905 339 aa13.44□□□□□ -0.26
BEST3-201ENST00000266661 LYPLA2O95372 231 aa13.44□□□□□ -0.26
BEST3-201ENST00000266661 NUDT17P0C025 328 aa13.44□□□□□ -0.26
BEST3-201ENST00000266661 INPP5BP32019 993 aa13.44□□□□□ -0.26
BEST3-201ENST00000266661 DHX9Q08211 1270 aaKnown RBP13.44□□□□□ -0.26
BEST3-201ENST00000266661 DHX34Q14147 1143 aaKnown RBP13.44□□□□□ -0.26
BEST3-201ENST00000266661 CLUL1Q15846 466 aa13.44□□□□□ -0.26
BEST3-201ENST00000266661 ARHGAP44Q17R89 818 aa13.44□□□□□ -0.26
BEST3-201ENST00000266661 PADI6Q6TGC4 694 aa13.44□□□□□ -0.26
BEST3-201ENST00000266661 DLK2Q6UY11 383 aa13.44□□□□□ -0.26
BEST3-201ENST00000266661 NIPA1Q7RTP0 329 aa13.44□□□□□ -0.26
BEST3-201ENST00000266661 SUGP1Q8IWZ8 645 aaKnown RBP13.44□□□□□ -0.26
BEST3-201ENST00000266661 MICALL1Q8N3F8 863 aa13.44□□□□□ -0.26
BEST3-201ENST00000266661 FAM151AQ8WW52 585 aa13.44□□□□□ -0.26
BEST3-201ENST00000266661 CD101Q93033 1021 aa13.44□□□□□ -0.26
BEST3-201ENST00000266661 PCDHB18PQ96TA0 734 aa13.44□□□□□ -0.26
BEST3-201ENST00000266661 NAP1L3Q99457 506 aaPredicted RBP13.44□□□□□ -0.26
BEST3-201ENST00000266661 RAB17Q9H0T7 212 aa13.44□□□□□ -0.26
BEST3-201ENST00000266661 DPH5Q9H2P9 285 aa13.44□□□□□ -0.26
BEST3-201ENST00000266661 EHMT1Q9H9B1 1298 aa13.44□□□□□ -0.26
BEST3-201ENST00000266661 GOPCQ9HD26 462 aa13.44□□□□□ -0.26
BEST3-201ENST00000266661 GRHL1Q9NZI5 618 aa13.44□□□□□ -0.26
BEST3-201ENST00000266661 DBR1Q9UK59 544 aaKnown RBP13.44□□□□□ -0.26
BEST3-201ENST00000266661 PFASO15067 1338 aa13.44□□□□□ -0.26
BEST3-201ENST00000266661 ZNF536O15090 1300 aa13.44□□□□□ -0.26
BEST3-201ENST00000266661 EMSYQ7Z589 1322 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms