RNA–Protein interactions for RNA: ENST00000265689.8

CHKA-201, Transcript of choline kinase alpha, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CHKA, Length 2,530 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-201ENST00000265689 EXOC7Q9UPT5 735 aa18.33■□□□□ 0.52
CHKA-201ENST00000265689 ADGRA3Q8IWK6 1321 aa18.33■□□□□ 0.52
CHKA-201ENST00000265689 EIF3JO75822 258 aaKnown RBP18.32■□□□□ 0.52
CHKA-201ENST00000265689 ALDH5A1P51649 535 aaPredicted RBP18.32■□□□□ 0.52
CHKA-201ENST00000265689 MTERF2Q49AM1 385 aa18.32■□□□□ 0.52
CHKA-201ENST00000265689 ZC3H15Q8WU90 426 aaKnown RBP18.32■□□□□ 0.52
CHKA-201ENST00000265689 BTNL10A8MVZ5 291 aa18.32■□□□□ 0.52
CHKA-201ENST00000265689 DGAT1O75907 488 aa18.32■□□□□ 0.52
CHKA-201ENST00000265689 ANXA13P27216 316 aa18.32■□□□□ 0.52
CHKA-201ENST00000265689 SNRPFP62306 86 aaKnown RBP18.32■□□□□ 0.52
CHKA-201ENST00000265689 SLC39A4Q6P5W5 647 aa18.32■□□□□ 0.52
CHKA-201ENST00000265689 NCAPG2Q86XI2 1143 aa18.32■□□□□ 0.52
CHKA-201ENST00000265689 RIOX2Q8IUF8 465 aa18.32■□□□□ 0.52
CHKA-201ENST00000265689 GLYCTKQ8IVS8 523 aa18.32■□□□□ 0.52
CHKA-201ENST00000265689 ARHGEF19Q8IW93 802 aa18.32■□□□□ 0.52
CHKA-201ENST00000265689 SPIRE2Q8WWL2 714 aa18.32■□□□□ 0.52
CHKA-201ENST00000265689 MS4A14Q96JA4 679 aa18.32■□□□□ 0.52
CHKA-201ENST00000265689 NTPCRQ9BSD7 190 aaKnown RBP18.32■□□□□ 0.52
CHKA-201ENST00000265689 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.32■□□□□ 0.524e-7■■■■■ 78
CHKA-201ENST00000265689 FAM170AA1A519 330 aa18.31■□□□□ 0.52
CHKA-201ENST00000265689 FOXN3O00409 490 aaPredicted RBP18.31■□□□□ 0.52
CHKA-201ENST00000265689 ERLIN1O75477 346 aa18.31■□□□□ 0.52
CHKA-201ENST00000265689 ATP4AP20648 1035 aa18.31■□□□□ 0.52
CHKA-201ENST00000265689 MOGSQ13724 837 aa18.31■□□□□ 0.52
CHKA-201ENST00000265689 SNRNP35Q16560 246 aaKnown RBP18.31■□□□□ 0.52
CHKA-201ENST00000265689 EPC2Q52LR7 807 aa18.31■□□□□ 0.52
CHKA-201ENST00000265689 WDR93Q6P2C0 686 aa18.31■□□□□ 0.52
CHKA-201ENST00000265689 SLC30A5Q8TAD4 765 aa18.31■□□□□ 0.52
CHKA-201ENST00000265689 MAF1Q9H063 256 aa18.31■□□□□ 0.52
CHKA-201ENST00000265689 GOLPH3Q9H4A6 298 aa18.31■□□□□ 0.52
CHKA-201ENST00000265689 UBE2TQ9NPD8 197 aaPredicted RBP18.31■□□□□ 0.52
CHKA-201ENST00000265689 ZMYND10O75800 440 aa18.31■□□□□ 0.52
CHKA-201ENST00000265689 ICAM3P32942 547 aa18.31■□□□□ 0.52
CHKA-201ENST00000265689 MATR3P43243 847 aaKnown RBP eCLIP18.31■□□□□ 0.52
CHKA-201ENST00000265689 NOP2P46087 812 aaKnown RBP18.31■□□□□ 0.52
CHKA-201ENST00000265689 Q3C1V9 767 aa18.31■□□□□ 0.52
CHKA-201ENST00000265689 MEI1Q5TIA1 1274 aa18.31■□□□□ 0.52
CHKA-201ENST00000265689 CCDC181Q5TID7 509 aa18.31■□□□□ 0.52
CHKA-201ENST00000265689 ZNF572Q7Z3I7 529 aaPredicted RBP18.31■□□□□ 0.52
CHKA-201ENST00000265689 ERO1BQ86YB8 467 aa18.31■□□□□ 0.52
CHKA-201ENST00000265689 SPATA4Q8NEY3 305 aa18.31■□□□□ 0.52
CHKA-201ENST00000265689 CCDC127Q96BQ5 260 aa18.31■□□□□ 0.52
CHKA-201ENST00000265689 HVCN1Q96D96 273 aa18.31■□□□□ 0.52
CHKA-201ENST00000265689 SPATC1LQ9H0A9 340 aa18.31■□□□□ 0.52
CHKA-201ENST00000265689 TMEM117Q9H0C3 514 aa18.31■□□□□ 0.52
CHKA-201ENST00000265689 ASCC2Q9H1I8 757 aaPredicted RBP18.31■□□□□ 0.52
CHKA-201ENST00000265689 ATP6V0A4Q9HBG4 840 aa18.31■□□□□ 0.52
CHKA-201ENST00000265689 TSKSQ9UJT2 592 aa18.31■□□□□ 0.52
CHKA-201ENST00000265689 IGSF9BQ9UPX0 1349 aa18.31■□□□□ 0.52
CHKA-201ENST00000265689 SOWAHBA6NEL2 793 aa18.3■□□□□ 0.52
CHKA-201ENST00000265689 SPDYE5A6NIY4 337 aa18.3■□□□□ 0.52
CHKA-201ENST00000265689 MAPK13O15264 365 aa18.3■□□□□ 0.52
CHKA-201ENST00000265689 N4BP1O75113 896 aaKnown RBP18.3■□□□□ 0.52
CHKA-201ENST00000265689 H2AFZP0C0S5 128 aa18.3■□□□□ 0.52
CHKA-201ENST00000265689 XKR3Q5GH77 459 aa18.3■□□□□ 0.52
CHKA-201ENST00000265689 H2AFVQ71UI9 128 aa18.3■□□□□ 0.52
CHKA-201ENST00000265689 MCPH1Q8NEM0 835 aa18.3■□□□□ 0.52
CHKA-201ENST00000265689 SYT11Q9BT88 431 aa18.3■□□□□ 0.52
CHKA-201ENST00000265689 POLR3FQ9H1D9 316 aaPredicted RBP18.3■□□□□ 0.52
CHKA-201ENST00000265689 C17orf75Q9HAS0 396 aa18.3■□□□□ 0.52
CHKA-201ENST00000265689 L1RE1Q9UN81 338 aa18.3■□□□□ 0.52
CHKA-201ENST00000265689 SYNGAP1Q96PV0 1343 aa18.3■□□□□ 0.52
CHKA-201ENST00000265689 A0A0G2JLL6 359 aaPredicted RBP18.3■□□□□ 0.52
CHKA-201ENST00000265689 TMCO5BA8MYB1 307 aa18.3■□□□□ 0.52
CHKA-201ENST00000265689 IRX3P78415 501 aaPredicted RBP18.3■□□□□ 0.52
CHKA-201ENST00000265689 CETN1Q12798 172 aa18.3■□□□□ 0.52
CHKA-201ENST00000265689 PRRT2Q7Z6L0 340 aaPredicted RBP18.3■□□□□ 0.52
CHKA-201ENST00000265689 POP1Q99575 1024 aaKnown RBP18.3■□□□□ 0.52
CHKA-201ENST00000265689 HINFPQ9BQA5 517 aa18.3■□□□□ 0.52
CHKA-201ENST00000265689 FBXO40Q9UH90 709 aa18.3■□□□□ 0.52
CHKA-201ENST00000265689 LOC285556D6RIA3 1793 aa18.3■□□□□ 0.52
CHKA-201ENST00000265689 ARID2Q68CP9 1835 aa18.29■□□□□ 0.52
CHKA-201ENST00000265689 P4HA2O15460 535 aa18.29■□□□□ 0.52
CHKA-201ENST00000265689 TUBBP07437 444 aa18.29■□□□□ 0.52
CHKA-201ENST00000265689 MXI1P50539 228 aa18.29■□□□□ 0.52
CHKA-201ENST00000265689 MRPS25P82663 173 aaKnown RBP18.29■□□□□ 0.52
CHKA-201ENST00000265689 MAP2K1Q02750 393 aaPredicted RBP18.29■□□□□ 0.52
CHKA-201ENST00000265689 PPATQ06203 517 aa18.29■□□□□ 0.52
CHKA-201ENST00000265689 TAS1R3Q7RTX0 852 aa18.29■□□□□ 0.52
CHKA-201ENST00000265689 PNMA8AQ86V59 439 aaPredicted RBP18.29■□□□□ 0.52
CHKA-201ENST00000265689 MMGT1Q8N4V1 131 aa18.29■□□□□ 0.52
CHKA-201ENST00000265689 ZNF302Q9NR11 478 aa18.29■□□□□ 0.52
CHKA-201ENST00000265689 MAP2K7O14733 419 aa18.29■□□□□ 0.52
CHKA-201ENST00000265689 CELF2O95319 508 aaKnown RBP18.29■□□□□ 0.52
CHKA-201ENST00000265689 ATG7O95352 703 aa18.29■□□□□ 0.52
CHKA-201ENST00000265689 GALCP54803 685 aa18.29■□□□□ 0.52
CHKA-201ENST00000265689 PTPROQ16827 1216 aa18.29■□□□□ 0.52
CHKA-201ENST00000265689 POMGNT1Q8WZA1 660 aa18.29■□□□□ 0.52
CHKA-201ENST00000265689 KAT5Q92993 513 aa18.29■□□□□ 0.52
CHKA-201ENST00000265689 ZBTB9Q96C00 473 aa18.29■□□□□ 0.52
CHKA-201ENST00000265689 MAFBQ9Y5Q3 323 aaPredicted RBP18.29■□□□□ 0.52
CHKA-201ENST00000265689 MCM3APO60318 1980 aa18.29■□□□□ 0.52
CHKA-201ENST00000265689 TARSL2A2RTX5 802 aaKnown RBP18.28■□□□□ 0.52
CHKA-201ENST00000265689 PGK2P07205 417 aa18.28■□□□□ 0.52
CHKA-201ENST00000265689 UBA1P22314 1058 aaKnown RBP18.28■□□□□ 0.52
CHKA-201ENST00000265689 PAFAH1B1P43034 410 aa18.28■□□□□ 0.52
CHKA-201ENST00000265689 EEPD1Q7L9B9 569 aa18.28■□□□□ 0.52
CHKA-201ENST00000265689 PARD3BQ8TEW8 1205 aa18.28■□□□□ 0.52
CHKA-201ENST00000265689 TMEM143Q96AN5 459 aa18.28■□□□□ 0.52
CHKA-201ENST00000265689 IFT74Q96LB3 600 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms