RNA–Protein interactions for RNA: ENST00000264012.8

CDH3-201, Transcript of cadherin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH3, Length 4,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-201ENST00000264012 EPC1Q9H2F5 836 aa14.95□□□□□ -0.02
CDH3-201ENST00000264012 RIMS1Q86UR5 1692 aaKnown RBP14.95□□□□□ -0.02
CDH3-201ENST00000264012 PFASO15067 1338 aa14.94□□□□□ -0.02
CDH3-201ENST00000264012 GRID2IPA4D2P6 1211 aa14.94□□□□□ -0.02
CDH3-201ENST00000264012 GOLGA8CPA6NN73 597 aa14.94□□□□□ -0.02
CDH3-201ENST00000264012 ZBTB24O43167 697 aaPredicted RBP14.94□□□□□ -0.02
CDH3-201ENST00000264012 RPA1P27694 616 aa14.94□□□□□ -0.02
CDH3-201ENST00000264012 PTPAQ15257 358 aa14.94□□□□□ -0.02
CDH3-201ENST00000264012 KCND2Q9NZV8 630 aa14.94□□□□□ -0.02
CDH3-201ENST00000264012 TLK1Q9UKI8 766 aa14.94□□□□□ -0.02
CDH3-201ENST00000264012 DPEP1P16444 411 aa14.94□□□□□ -0.02
CDH3-201ENST00000264012 MUM1L1Q5H9M0 696 aa14.94□□□□□ -0.02
CDH3-201ENST00000264012 PRAMEF18Q5VWM3 479 aa14.94□□□□□ -0.02
CDH3-201ENST00000264012 TRIM72Q6ZMU5 477 aa14.94□□□□□ -0.02
CDH3-201ENST00000264012 DAGLBQ8NCG7 672 aa14.94□□□□□ -0.02
CDH3-201ENST00000264012 MCUQ8NE86 351 aa14.94□□□□□ -0.02
CDH3-201ENST00000264012 FAM217BQ9NTX9 383 aaPredicted RBP14.94□□□□□ -0.02
CDH3-201ENST00000264012 SLIT1O75093 1534 aa14.94□□□□□ -0.02
CDH3-201ENST00000264012 CYP26A1O43174 497 aa14.94□□□□□ -0.02
CDH3-201ENST00000264012 MYBP10242 640 aa14.94□□□□□ -0.02
CDH3-201ENST00000264012 CIITAP33076 1130 aa14.94□□□□□ -0.02
CDH3-201ENST00000264012 AP3M2P53677 418 aa14.94□□□□□ -0.02
CDH3-201ENST00000264012 FAF2Q96CS3 445 aa14.94□□□□□ -0.02
CDH3-201ENST00000264012 HDAC11Q96DB2 347 aa14.94□□□□□ -0.02
CDH3-201ENST00000264012 AGPAT1Q99943 283 aa14.94□□□□□ -0.02
CDH3-201ENST00000264012 GCOM2Q9BZD3 368 aaPredicted RBP14.94□□□□□ -0.02
CDH3-201ENST00000264012 MYOZ2Q9NPC6 264 aa14.94□□□□□ -0.02
CDH3-201ENST00000264012 GGA3Q9NZ52 723 aa14.94□□□□□ -0.02
CDH3-201ENST00000264012 PCSK1NQ9UHG2 260 aa14.94□□□□□ -0.02
CDH3-201ENST00000264012 IQCA1LA6NCM1 817 aa14.94□□□□□ -0.02
CDH3-201ENST00000264012 SDC4P31431 198 aa14.94□□□□□ -0.02
CDH3-201ENST00000264012 GMPSP49915 693 aaPredicted RBP14.94□□□□□ -0.02
CDH3-201ENST00000264012 MAP7Q14244 749 aa14.94□□□□□ -0.02
CDH3-201ENST00000264012 RIT2Q99578 217 aa14.94□□□□□ -0.02
CDH3-201ENST00000264012 KLC2Q9H0B6 622 aa14.94□□□□□ -0.02
CDH3-201ENST00000264012 PLS3P13797 630 aa14.93□□□□□ -0.02
CDH3-201ENST00000264012 THOC5Q13769 683 aaKnown RBP14.93□□□□□ -0.02
CDH3-201ENST00000264012 SLC18A3Q16572 532 aa14.93□□□□□ -0.02
CDH3-201ENST00000264012 TC2NQ8N9U0 490 aa14.93□□□□□ -0.02
CDH3-201ENST00000264012 TMEM143Q96AN5 459 aa14.93□□□□□ -0.02
CDH3-201ENST00000264012 MYBL1P10243 752 aa14.93□□□□□ -0.02
CDH3-201ENST00000264012 UCHL3P15374 230 aa14.93□□□□□ -0.02
CDH3-201ENST00000264012 ARL4CP56559 192 aa14.93□□□□□ -0.02
CDH3-201ENST00000264012 NFIAQ12857 509 aa14.93□□□□□ -0.02
CDH3-201ENST00000264012 TKFCQ3LXA3 575 aa14.93□□□□□ -0.02
CDH3-201ENST00000264012 GDAP1Q8TB36 358 aa14.93□□□□□ -0.02
CDH3-201ENST00000264012 MORC4Q8TE76 937 aa14.93□□□□□ -0.02
CDH3-201ENST00000264012 SKA2Q8WVK7 121 aaPredicted RBP14.93□□□□□ -0.02
CDH3-201ENST00000264012 MXRA8Q9BRK3 442 aa14.93□□□□□ -0.02
CDH3-201ENST00000264012 HEY1Q9Y5J3 304 aa14.93□□□□□ -0.02
CDH3-201ENST00000264012 MORC2Q9Y6X9 1032 aaPredicted RBP14.93□□□□□ -0.02
CDH3-201ENST00000264012 A0A087WUV0 522 aaPredicted RBP14.93□□□□□ -0.02
CDH3-201ENST00000264012 SSU72P8A0A1W2PR75 194 aa14.93□□□□□ -0.02
CDH3-201ENST00000264012 FMO5P49326 533 aa14.93□□□□□ -0.02
CDH3-201ENST00000264012 R3HDM1Q15032 1099 aaKnown RBP14.93□□□□□ -0.02
CDH3-201ENST00000264012 ELOA2Q8IYF1 753 aaPredicted RBP14.93□□□□□ -0.02
CDH3-201ENST00000264012 DCLK2Q8N568 766 aa14.93□□□□□ -0.02
CDH3-201ENST00000264012 DEFB129Q9H1M3 183 aa14.93□□□□□ -0.02
CDH3-201ENST00000264012 APEX2Q9UBZ4 518 aa14.93□□□□□ -0.02
CDH3-201ENST00000264012 IP6K2Q9UHH9 426 aa14.93□□□□□ -0.02
CDH3-201ENST00000264012 NOC2LQ9Y3T9 749 aaKnown RBP14.93□□□□□ -0.02
CDH3-201ENST00000264012 KIAA0391O15091 583 aaKnown RBP14.92□□□□□ -0.02
CDH3-201ENST00000264012 SLC4A1P02730 911 aa14.92□□□□□ -0.02
CDH3-201ENST00000264012 PRKCBP05771 671 aa14.92□□□□□ -0.02
CDH3-201ENST00000264012 CHRNA3P32297 505 aa14.92□□□□□ -0.02
CDH3-201ENST00000264012 RCN2Q14257 317 aa14.92□□□□□ -0.02
CDH3-201ENST00000264012 RWDD4Q6NW29 188 aaKnown RBP14.92□□□□□ -0.02
CDH3-201ENST00000264012 TTC39CQ8N584 583 aa14.92□□□□□ -0.02
CDH3-201ENST00000264012 AGBL1Q96MI9 1066 aa14.92□□□□□ -0.02
CDH3-201ENST00000264012 STK33Q9BYT3 514 aa14.92□□□□□ -0.02
CDH3-201ENST00000264012 WNT8AQ9H1J5 351 aa14.92□□□□□ -0.02
CDH3-201ENST00000264012 SPON1Q9HCB6 807 aa14.92□□□□□ -0.02
CDH3-201ENST00000264012 GYS2P54840 703 aa14.92□□□□□ -0.02
CDH3-201ENST00000264012 SLC15A2Q16348 729 aa14.92□□□□□ -0.02
CDH3-201ENST00000264012 RASGRP2Q7LDG7 609 aa14.92□□□□□ -0.02
CDH3-201ENST00000264012 SEPT6Q14141 434 aa14.92□□□□□ -0.02
CDH3-201ENST00000264012 MUM1Q2TAK8 710 aa14.92□□□□□ -0.02
CDH3-201ENST00000264012 EP400NLQ6ZTU2 488 aa14.92□□□□□ -0.02
CDH3-201ENST00000264012 ADGRA1Q86SQ6 560 aa14.92□□□□□ -0.02
CDH3-201ENST00000264012 RHOT1Q8IXI2 618 aa14.92□□□□□ -0.02
CDH3-201ENST00000264012 RYBPQ8N488 228 aaPredicted RBP14.92□□□□□ -0.02
CDH3-201ENST00000264012 SPATA4Q8NEY3 305 aa14.92□□□□□ -0.02
CDH3-201ENST00000264012 SEPT1Q8WYJ6 367 aa14.92□□□□□ -0.02
CDH3-201ENST00000264012 PITPNM2Q9BZ72 1349 aa14.92□□□□□ -0.02
CDH3-201ENST00000264012 IQANK1A0A1B0GTG1 560 aa14.92□□□□□ -0.02
CDH3-201ENST00000264012 BAG2O95816 211 aa14.92□□□□□ -0.02
CDH3-201ENST00000264012 ZC2HC1CQ53FD0 456 aaPredicted RBP14.92□□□□□ -0.02
CDH3-201ENST00000264012 THEM5Q8N1Q8 247 aa14.92□□□□□ -0.02
CDH3-201ENST00000264012 TTC7AQ9ULT0 858 aaPredicted RBP14.92□□□□□ -0.02
CDH3-201ENST00000264012 WDR91A4D1P6 747 aa14.91□□□□□ -0.02
CDH3-201ENST00000264012 KRT7P08729 469 aa14.91□□□□□ -0.02
CDH3-201ENST00000264012 ACOT2P49753 483 aa14.91□□□□□ -0.02
CDH3-201ENST00000264012 HNRNPH2P55795 449 aaKnown RBP14.91□□□□□ -0.02
CDH3-201ENST00000264012 SEC23AQ15436 765 aa14.91□□□□□ -0.02
CDH3-201ENST00000264012 AGBL3Q8NEM8 1001 aa14.91□□□□□ -0.02
CDH3-201ENST00000264012 PPP1R3GB7ZBB8 358 aa14.91□□□□□ -0.02
CDH3-201ENST00000264012 EVI5O60447 810 aa14.91□□□□□ -0.02
CDH3-201ENST00000264012 BIRC2Q13490 618 aa14.91□□□□□ -0.02
CDH3-201ENST00000264012 SAMD7Q7Z3H4 446 aa14.91□□□□□ -0.02
CDH3-201ENST00000264012 TRIM59Q8IWR1 403 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms