RNA–Protein interactions for RNA: ENST00000263741.11

SDF4-201, Transcript of stromal cell derived factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDF4, Length 2,079 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-201ENST00000263741 BAIAP3O94812 1187 aa20.2■□□□□ 0.82
SDF4-201ENST00000263741 KCNJ6P48051 423 aa20.2■□□□□ 0.82
SDF4-201ENST00000263741 NCKAP1LP55160 1127 aa20.2■□□□□ 0.82
SDF4-201ENST00000263741 AMPD3Q01432 767 aa20.2■□□□□ 0.82
SDF4-201ENST00000263741 DSC3Q14574 896 aa20.2■□□□□ 0.82
SDF4-201ENST00000263741 RASIP1Q5U651 963 aa20.2■□□□□ 0.82
SDF4-201ENST00000263741 GLIS3Q8NEA6 775 aa20.2■□□□□ 0.82
SDF4-201ENST00000263741 LMBRD1Q9NUN5 540 aa20.2■□□□□ 0.82
SDF4-201ENST00000263741 FNDC1Q4ZHG4 1894 aaPredicted RBP20.19■□□□□ 0.82
SDF4-201ENST00000263741 FRMD3A2A2Y4 597 aa20.19■□□□□ 0.82
SDF4-201ENST00000263741 ARF4P18085 180 aaPredicted RBP20.19■□□□□ 0.82
SDF4-201ENST00000263741 HOXA11P31270 313 aaPredicted RBP20.19■□□□□ 0.82
SDF4-201ENST00000263741 CASP5P51878 434 aa20.19■□□□□ 0.82
SDF4-201ENST00000263741 MAPK6Q16659 721 aa20.19■□□□□ 0.82
SDF4-201ENST00000263741 ZC2HC1CQ53FD0 456 aaPredicted RBP20.19■□□□□ 0.82
SDF4-201ENST00000263741 HERC4Q5GLZ8 1057 aaPredicted RBP20.19■□□□□ 0.82
SDF4-201ENST00000263741 SPIRE2Q8WWL2 714 aa20.19■□□□□ 0.82
SDF4-201ENST00000263741 FZD8Q9H461 694 aa20.19■□□□□ 0.82
SDF4-201ENST00000263741 DACT1Q9NYF0 836 aa20.19■□□□□ 0.82
SDF4-201ENST00000263741 SLC4A7Q9Y6M7 1214 aa20.19■□□□□ 0.82
SDF4-201ENST00000263741 TRIP11Q15643 1979 aa20.19■□□□□ 0.82
SDF4-201ENST00000263741 ENPP3O14638 875 aa20.18■□□□□ 0.82
SDF4-201ENST00000263741 UPP2O95045 317 aa20.18■□□□□ 0.82
SDF4-201ENST00000263741 MAPTP10636 758 aaKnown RBP20.18■□□□□ 0.82
SDF4-201ENST00000263741 TWF2Q6IBS0 349 aaKnown RBP20.18■□□□□ 0.82
SDF4-201ENST00000263741 HAUS6Q7Z4H7 955 aa20.18■□□□□ 0.82
SDF4-201ENST00000263741 FTHL17Q9BXU8 183 aa20.18■□□□□ 0.82
SDF4-201ENST00000263741 LRRC27Q9C0I9 530 aa20.18■□□□□ 0.82
SDF4-201ENST00000263741 TSPYL2Q9H2G4 693 aaPredicted RBP20.18■□□□□ 0.82
SDF4-201ENST00000263741 IKZF4Q9H2S9 585 aa20.18■□□□□ 0.82
SDF4-201ENST00000263741 COL4A6Q14031 1691 aa20.18■□□□□ 0.82
SDF4-201ENST00000263741 K7ERI5 159 aa20.18■□□□□ 0.82
SDF4-201ENST00000263741 SMTNP53814 917 aa20.18■□□□□ 0.82
SDF4-201ENST00000263741 PNOCQ13519 176 aa20.18■□□□□ 0.82
SDF4-201ENST00000263741 TMEM132AQ24JP5 1023 aa20.18■□□□□ 0.82
SDF4-201ENST00000263741 CCDC65Q8IXS2 484 aa20.18■□□□□ 0.82
SDF4-201ENST00000263741 MRPL44Q9H9J2 332 aaKnown RBP20.18■□□□□ 0.82
SDF4-201ENST00000263741 PRMT7Q9NVM4 692 aaPredicted RBP20.18■□□□□ 0.82
SDF4-201ENST00000263741 KIAA1671Q9BY89 1806 aa20.18■□□□□ 0.82
SDF4-201ENST00000263741 CNTNAP2Q9UHC6 1331 aa20.17■□□□□ 0.82
SDF4-201ENST00000263741 GTPBP6O43824 516 aaPredicted RBP20.17■□□□□ 0.82
SDF4-201ENST00000263741 MYBP10242 640 aa20.17■□□□□ 0.82
SDF4-201ENST00000263741 ZSCAN20P17040 1043 aaPredicted RBP20.17■□□□□ 0.82
SDF4-201ENST00000263741 PRPF4BQ13523 1007 aaKnown RBP20.17■□□□□ 0.82
SDF4-201ENST00000263741 NTPCRQ9BSD7 190 aaKnown RBP20.17■□□□□ 0.82
SDF4-201ENST00000263741 MTIF3Q9H2K0 278 aaKnown RBP20.17■□□□□ 0.82
SDF4-201ENST00000263741 KLRC4O43908 158 aa20.17■□□□□ 0.82
SDF4-201ENST00000263741 KINO60870 393 aaKnown RBP20.17■□□□□ 0.82
SDF4-201ENST00000263741 ATP2A2P16615 1042 aaKnown RBP20.17■□□□□ 0.82
SDF4-201ENST00000263741 GAP43P17677 238 aa20.17■□□□□ 0.82
SDF4-201ENST00000263741 EFNA5P52803 228 aa20.17■□□□□ 0.82
SDF4-201ENST00000263741 RABGGTBP53611 331 aa20.17■□□□□ 0.82
SDF4-201ENST00000263741 NT5DC1Q5TFE4 455 aa20.17■□□□□ 0.82
SDF4-201ENST00000263741 PPP4R3CPQ6ZMV5 832 aa20.17■□□□□ 0.82
SDF4-201ENST00000263741 RNF169Q8NCN4 708 aa20.17■□□□□ 0.82
SDF4-201ENST00000263741 EIF2AQ9BY44 585 aaKnown RBP20.17■□□□□ 0.82
SDF4-201ENST00000263741 RGS18Q9NS28 235 aa20.17■□□□□ 0.82
SDF4-201ENST00000263741 CDH23Q9H251 3354 aa20.17■□□□□ 0.82
SDF4-201ENST00000263741 GCNT3O95395 438 aa20.16■□□□□ 0.82
SDF4-201ENST00000263741 AMHP03971 560 aa20.16■□□□□ 0.82
SDF4-201ENST00000263741 POSTNQ15063 836 aa20.16■□□□□ 0.82
SDF4-201ENST00000263741 EEF1DP3Q658K8 133 aa20.16■□□□□ 0.82
SDF4-201ENST00000263741 CNNM4Q6P4Q7 775 aa20.16■□□□□ 0.82
SDF4-201ENST00000263741 UNC13DQ70J99 1090 aa20.16■□□□□ 0.82
SDF4-201ENST00000263741 TARS2Q9BW92 718 aaKnown RBP20.16■□□□□ 0.82
SDF4-201ENST00000263741 CITO14578 2027 aa20.16■□□□□ 0.82
SDF4-201ENST00000263741 C9IYK1 514 aa20.15■□□□□ 0.82
SDF4-201ENST00000263741 ACKR2O00590 384 aa20.15■□□□□ 0.82
SDF4-201ENST00000263741 KCNA1Q09470 495 aa20.15■□□□□ 0.82
SDF4-201ENST00000263741 FAM187BQ17R55 369 aa20.15■□□□□ 0.82
SDF4-201ENST00000263741 UBXN11Q5T124 520 aa20.15■□□□□ 0.82
SDF4-201ENST00000263741 PDZD7Q9H5P4 517 aa20.15■□□□□ 0.82
SDF4-201ENST00000263741 TMEM134Q9H6X4 195 aa20.15■□□□□ 0.82
SDF4-201ENST00000263741 CHD9Q3L8U1 2897 aa20.15■□□□□ 0.82
SDF4-201ENST00000263741 NLRC5Q86WI3 1866 aa20.15■□□□□ 0.82
SDF4-201ENST00000263741 SZT2Q5T011 3432 aa20.15■□□□□ 0.82
SDF4-201ENST00000263741 EFCAB14O75071 495 aa20.15■□□□□ 0.82
SDF4-201ENST00000263741 GATMP50440 423 aa20.15■□□□□ 0.82
SDF4-201ENST00000263741 DPYDQ12882 1025 aa20.15■□□□□ 0.82
SDF4-201ENST00000263741 KMT5BQ4FZB7 885 aa20.15■□□□□ 0.82
SDF4-201ENST00000263741 NOTUMQ6P988 496 aa20.15■□□□□ 0.82
SDF4-201ENST00000263741 PRIMPOLQ96LW4 560 aa20.15■□□□□ 0.82
SDF4-201ENST00000263741 OLFML3Q9NRN5 406 aa20.15■□□□□ 0.82
SDF4-201ENST00000263741 TDRD15B5MCY1 1934 aaKnown RBP20.15■□□□□ 0.82
SDF4-201ENST00000263741 MEIS3P2A8K0S8 358 aa20.14■□□□□ 0.81
SDF4-201ENST00000263741 TISP43B9A030 160 aa20.14■□□□□ 0.81
SDF4-201ENST00000263741 MYOGP15173 224 aa20.14■□□□□ 0.81
SDF4-201ENST00000263741 ATF7P17544 494 aaPredicted RBP20.14■□□□□ 0.81
SDF4-201ENST00000263741 PBX2P40425 430 aa20.14■□□□□ 0.81
SDF4-201ENST00000263741 STRN3Q13033 797 aa20.14■□□□□ 0.81
SDF4-201ENST00000263741 FAM26FQ5R3K3 315 aa20.14■□□□□ 0.81
SDF4-201ENST00000263741 ZNF720Q7Z2F6 126 aa20.14■□□□□ 0.81
SDF4-201ENST00000263741 HERC6Q8IVU3 1022 aa20.14■□□□□ 0.81
SDF4-201ENST00000263741 LPPQ93052 612 aa20.14■□□□□ 0.81
SDF4-201ENST00000263741 SLC9A7Q96T83 725 aa20.14■□□□□ 0.81
SDF4-201ENST00000263741 FAM105AQ9NUU6 356 aa20.14■□□□□ 0.81
SDF4-201ENST00000263741 SEL1LQ9UBV2 794 aa20.14■□□□□ 0.81
SDF4-201ENST00000263741 TBX20Q9UMR3 447 aa20.14■□□□□ 0.81
SDF4-201ENST00000263741 HES2Q9Y543 173 aa20.14■□□□□ 0.81
SDF4-201ENST00000263741 PPP1R37O75864 691 aa20.14■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms