RNA–Protein interactions for RNA: ENST00000261517.9

VPS13C-202, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 13,400 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-202ENST00000261517 EPC1Q9H2F5 836 aa4.6□□□□□ -1.67
VPS13C-202ENST00000261517 UBE2TQ9NPD8 197 aaPredicted RBP4.6□□□□□ -1.67
VPS13C-202ENST00000261517 INTS9Q9NV88 658 aaKnown RBP4.6□□□□□ -1.67
VPS13C-202ENST00000261517 AFG3L2Q9Y4W6 797 aa4.6□□□□□ -1.67
VPS13C-202ENST00000261517 H7C4K7 107 aa4.6□□□□□ -1.67
VPS13C-202ENST00000261517 DDX39AO00148 427 aaKnown RBP4.6□□□□□ -1.67
VPS13C-202ENST00000261517 CAMTA2O94983 1202 aa4.6□□□□□ -1.67
VPS13C-202ENST00000261517 GH1P01241 217 aa4.6□□□□□ -1.67
VPS13C-202ENST00000261517 APOEP02649 317 aa4.6□□□□□ -1.67
VPS13C-202ENST00000261517 KRT1P04264 644 aa4.6□□□□□ -1.67
VPS13C-202ENST00000261517 PDE1BQ01064 536 aa4.6□□□□□ -1.67
VPS13C-202ENST00000261517 MICALL1Q8N3F8 863 aa4.6□□□□□ -1.67
VPS13C-202ENST00000261517 FBXL13Q8NEE6 735 aa4.6□□□□□ -1.67
VPS13C-202ENST00000261517 ROPN1BQ9BZX4 212 aaPredicted RBP4.6□□□□□ -1.67
VPS13C-202ENST00000261517 BLZF1Q9H2G9 400 aa4.6□□□□□ -1.67
VPS13C-202ENST00000261517 ROPN1Q9HAT0 212 aaPredicted RBP4.6□□□□□ -1.67
VPS13C-202ENST00000261517 NFAT5O94916 1531 aa4.6□□□□□ -1.67
VPS13C-202ENST00000261517 ECM2O94769 699 aaPredicted RBP4.6□□□□□ -1.67
VPS13C-202ENST00000261517 SEC24BO95487 1268 aa4.6□□□□□ -1.67
VPS13C-202ENST00000261517 ATICP31939 592 aa4.6□□□□□ -1.67
VPS13C-202ENST00000261517 HDAC4P56524 1084 aa4.6□□□□□ -1.67
VPS13C-202ENST00000261517 COASYQ13057 564 aa4.6□□□□□ -1.67
VPS13C-202ENST00000261517 C4orf50Q6ZRC1 276 aa4.6□□□□□ -1.67
VPS13C-202ENST00000261517 EIF1ADQ8N9N8 165 aaKnown RBP4.6□□□□□ -1.67
VPS13C-202ENST00000261517 GPT2Q8TD30 523 aa4.6□□□□□ -1.67
VPS13C-202ENST00000261517 GJA10Q969M2 543 aa4.6□□□□□ -1.67
VPS13C-202ENST00000261517 NSUN4Q96CB9 384 aaKnown RBP4.6□□□□□ -1.67
VPS13C-202ENST00000261517 EPSTI1Q96J88 318 aa4.6□□□□□ -1.67
VPS13C-202ENST00000261517 RNF146Q9NTX7 359 aa4.6□□□□□ -1.67
VPS13C-202ENST00000261517 FAF1Q9UNN5 650 aaPredicted RBP4.6□□□□□ -1.67
VPS13C-202ENST00000261517 MYH7P12883 1935 aa4.6□□□□□ -1.67
VPS13C-202ENST00000261517 SGK1O00141 431 aa4.59□□□□□ -1.67
VPS13C-202ENST00000261517 KCNQ3O43525 872 aa4.59□□□□□ -1.67
VPS13C-202ENST00000261517 PCK1P35558 622 aa4.59□□□□□ -1.67
VPS13C-202ENST00000261517 SOX5P35711 763 aa4.59□□□□□ -1.67
VPS13C-202ENST00000261517 ABCE1P61221 599 aaKnown RBP4.59□□□□□ -1.67
VPS13C-202ENST00000261517 ESRRGP62508 458 aa4.59□□□□□ -1.67
VPS13C-202ENST00000261517 CENPCQ03188 943 aa4.59□□□□□ -1.67
VPS13C-202ENST00000261517 KCNH2Q12809 1159 aa4.59□□□□□ -1.67
VPS13C-202ENST00000261517 SPDYCQ5MJ68 293 aa4.59□□□□□ -1.67
VPS13C-202ENST00000261517 NME8Q8N427 588 aa4.59□□□□□ -1.67
VPS13C-202ENST00000261517 ARHGEF1Q92888 912 aaKnown RBP4.59□□□□□ -1.67
VPS13C-202ENST00000261517 ARHGEF2Q92974 986 aaKnown RBP4.59□□□□□ -1.67
VPS13C-202ENST00000261517 DDX27Q96GQ7 796 aaKnown RBP4.59□□□□□ -1.67
VPS13C-202ENST00000261517 MYL10Q9BUA6 226 aa4.59□□□□□ -1.67
VPS13C-202ENST00000261517 MRFAP1Q9Y605 127 aa4.59□□□□□ -1.67
VPS13C-202ENST00000261517 FAM205AQ6ZU69 1335 aa4.59□□□□□ -1.67
VPS13C-202ENST00000261517 LSM8O95777 96 aaKnown RBP4.59□□□□□ -1.67
VPS13C-202ENST00000261517 EGFRP00533 1210 aa4.59□□□□□ -1.67
VPS13C-202ENST00000261517 GSTA1P08263 222 aa4.59□□□□□ -1.67
VPS13C-202ENST00000261517 GSTA2P09210 222 aa4.59□□□□□ -1.67
VPS13C-202ENST00000261517 PMLP29590 882 aa4.59□□□□□ -1.67
VPS13C-202ENST00000261517 AXLP30530 894 aa4.59□□□□□ -1.67
VPS13C-202ENST00000261517 UBXN2AP68543 259 aa4.59□□□□□ -1.67
VPS13C-202ENST00000261517 MTERF2Q49AM1 385 aa4.59□□□□□ -1.67
VPS13C-202ENST00000261517 RNF219Q5W0B1 726 aaPredicted RBP4.59□□□□□ -1.67
VPS13C-202ENST00000261517 CATSPER4Q7RTX7 472 aa4.59□□□□□ -1.67
VPS13C-202ENST00000261517 STKLD1Q8NE28 680 aa4.59□□□□□ -1.67
VPS13C-202ENST00000261517 APPL2Q8NEU8 664 aa4.59□□□□□ -1.67
VPS13C-202ENST00000261517 OPTNQ96CV9 577 aa4.59□□□□□ -1.67
VPS13C-202ENST00000261517 BUD13Q9BRD0 619 aaKnown RBP eCLIP4.59□□□□□ -1.671e-6■■□□□ 14
VPS13C-202ENST00000261517 ZFYVE28Q9HCC9 887 aa4.59□□□□□ -1.67
VPS13C-202ENST00000261517 ABCF3Q9NUQ8 709 aa4.59□□□□□ -1.67
VPS13C-202ENST00000261517 UNCXA6NJT0 531 aa4.59□□□□□ -1.67
VPS13C-202ENST00000261517 ERBB2P04626 1255 aa4.59□□□□□ -1.67
VPS13C-202ENST00000261517 HSD17B4P51659 736 aa4.59□□□□□ -1.67
VPS13C-202ENST00000261517 GEMIN4P57678 1058 aaKnown RBP4.59□□□□□ -1.67
VPS13C-202ENST00000261517 EFHC2Q5JST6 749 aa4.59□□□□□ -1.67
VPS13C-202ENST00000261517 FMR1NBQ8N0W7 255 aaPredicted RBP4.59□□□□□ -1.67
VPS13C-202ENST00000261517 FAM163AQ96GL9 167 aaPredicted RBP4.59□□□□□ -1.67
VPS13C-202ENST00000261517 FAR2Q96K12 515 aa4.59□□□□□ -1.67
VPS13C-202ENST00000261517 ANKRD27Q96NW4 1050 aa4.59□□□□□ -1.67
VPS13C-202ENST00000261517 PLIN2Q99541 437 aa4.59□□□□□ -1.67
VPS13C-202ENST00000261517 ZWILCHQ9H900 591 aa4.59□□□□□ -1.67
VPS13C-202ENST00000261517 MT-ND3P03897 115 aa4.59□□□□□ -1.67
VPS13C-202ENST00000261517 PSMA2P25787 234 aa4.59□□□□□ -1.67
VPS13C-202ENST00000261517 FKBP1BP68106 108 aa4.59□□□□□ -1.67
VPS13C-202ENST00000261517 CRLF3Q8IUI8 442 aa4.59□□□□□ -1.67
VPS13C-202ENST00000261517 SUGP1Q8IWZ8 645 aaKnown RBP4.59□□□□□ -1.67
VPS13C-202ENST00000261517 NLRC4Q9NPP4 1024 aa4.59□□□□□ -1.67
VPS13C-202ENST00000261517 PIH1D3Q9NQM4 214 aaKnown RBP4.59□□□□□ -1.67
VPS13C-202ENST00000261517 ABHD10Q9NUJ1 306 aa4.59□□□□□ -1.67
VPS13C-202ENST00000261517 HACL1Q9UJ83 578 aa4.59□□□□□ -1.67
VPS13C-202ENST00000261517 PALD1Q9ULE6 856 aa4.59□□□□□ -1.67
VPS13C-202ENST00000261517 NCAM2O15394 837 aa4.59□□□□□ -1.67
VPS13C-202ENST00000261517 CASP14P31944 242 aa4.59□□□□□ -1.67
VPS13C-202ENST00000261517 NFIAQ12857 509 aa4.59□□□□□ -1.67
VPS13C-202ENST00000261517 TOB2Q14106 344 aaPredicted RBP4.59□□□□□ -1.67
VPS13C-202ENST00000261517 CTAGE3PQ8IX95 158 aa4.59□□□□□ -1.67
VPS13C-202ENST00000261517 CXorf38Q8TB03 319 aa4.59□□□□□ -1.67
VPS13C-202ENST00000261517 PHF20Q9BVI0 1012 aa4.59□□□□□ -1.67
VPS13C-202ENST00000261517 OXCT2Q9BYC2 517 aaPredicted RBP4.59□□□□□ -1.67
VPS13C-202ENST00000261517 TMCO1Q9UM00 188 aa4.59□□□□□ -1.67
VPS13C-202ENST00000261517 USTQ9Y2C2 406 aa4.59□□□□□ -1.67
VPS13C-202ENST00000261517 GSG1L2A8MUP6 293 aa4.59□□□□□ -1.67
VPS13C-202ENST00000261517 PLS3P13797 630 aa4.59□□□□□ -1.67
VPS13C-202ENST00000261517 ELF2Q15723 593 aa4.59□□□□□ -1.67
VPS13C-202ENST00000261517 SEPT14Q6ZU15 432 aa4.59□□□□□ -1.67
VPS13C-202ENST00000261517 RASEFQ8IZ41 740 aa4.59□□□□□ -1.67
VPS13C-202ENST00000261517 SIKE1Q9BRV8 207 aa4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms