RNA–Protein interactions for RNA: ENST00000261443.9

CSDE1-201, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 3,228 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-201ENST00000261443 IL9RQ01113 521 aa7.75□□□□□ -1.17
CSDE1-201ENST00000261443 OCRLQ01968 901 aa7.75□□□□□ -1.17
CSDE1-201ENST00000261443 EVX2Q03828 476 aa7.75□□□□□ -1.17
CSDE1-201ENST00000261443 MCL1Q07820 350 aa7.75□□□□□ -1.17
CSDE1-201ENST00000261443 RRP1BQ14684 758 aaKnown RBP7.75□□□□□ -1.17
CSDE1-201ENST00000261443 MYBPC3Q14896 1274 aa7.75□□□□□ -1.17
CSDE1-201ENST00000261443 EXOC3L4Q17RC7 722 aa7.75□□□□□ -1.17
CSDE1-201ENST00000261443 SEPT14Q6ZU15 432 aa7.75□□□□□ -1.17
CSDE1-201ENST00000261443 LCA5Q86VQ0 697 aa7.75□□□□□ -1.17
CSDE1-201ENST00000261443 NLRP10Q86W26 655 aa7.75□□□□□ -1.17
CSDE1-201ENST00000261443 PPFIBP2Q8ND30 876 aa7.75□□□□□ -1.17
CSDE1-201ENST00000261443 CTNNBL1Q8WYA6 563 aaPredicted RBP7.75□□□□□ -1.17
CSDE1-201ENST00000261443 RFFLQ8WZ73 363 aa7.75□□□□□ -1.17
CSDE1-201ENST00000261443 ART4Q93070 314 aa7.75□□□□□ -1.17
CSDE1-201ENST00000261443 GALNT8Q9NY28 637 aa7.75□□□□□ -1.17
CSDE1-201ENST00000261443 PCYOX1Q9UHG3 505 aa7.75□□□□□ -1.17
CSDE1-201ENST00000261443 TRMT112Q9UI30 125 aaKnown RBP7.75□□□□□ -1.17
CSDE1-201ENST00000261443 NENFQ9UMX5 172 aa7.75□□□□□ -1.17
CSDE1-201ENST00000261443 RPL26L1Q9UNX3 145 aaKnown RBP7.75□□□□□ -1.17
CSDE1-201ENST00000261443 LRP5O75197 1615 aa7.75□□□□□ -1.17
CSDE1-201ENST00000261443 ECE2O60344 883 aa7.75□□□□□ -1.17
CSDE1-201ENST00000261443 PDE8AO60658 829 aa7.75□□□□□ -1.17
CSDE1-201ENST00000261443 TTLL1O95922 423 aa7.75□□□□□ -1.17
CSDE1-201ENST00000261443 PON1P27169 355 aa7.75□□□□□ -1.17
CSDE1-201ENST00000261443 CALCOCO2Q13137 446 aa7.75□□□□□ -1.17
CSDE1-201ENST00000261443 TMEM266Q2M3C6 531 aa7.75□□□□□ -1.17
CSDE1-201ENST00000261443 CNPY1Q3B7I2 92 aa7.75□□□□□ -1.17
CSDE1-201ENST00000261443 PABPC1LQ4VXU2 614 aaKnown RBP7.75□□□□□ -1.17
CSDE1-201ENST00000261443 ZC2HC1CQ53FD0 456 aaPredicted RBP7.75□□□□□ -1.17
CSDE1-201ENST00000261443 ACBD5Q5T8D3 534 aaPredicted RBP7.75□□□□□ -1.17
CSDE1-201ENST00000261443 TTC27Q6P3X3 843 aa7.75□□□□□ -1.17
CSDE1-201ENST00000261443 PPP1R21Q6ZMI0 780 aa7.75□□□□□ -1.17
CSDE1-201ENST00000261443 LRRC74BQ6ZQY2 392 aa7.75□□□□□ -1.17
CSDE1-201ENST00000261443 SRRM1Q8IYB3 904 aaKnown RBP7.75□□□□□ -1.17
CSDE1-201ENST00000261443 CCDC105Q8IYK2 499 aa7.75□□□□□ -1.17
CSDE1-201ENST00000261443 PRELID2Q8N945 189 aa7.75□□□□□ -1.17
CSDE1-201ENST00000261443 PNMA1Q8ND90 353 aa7.75□□□□□ -1.17
CSDE1-201ENST00000261443 SNX29Q8TEQ0 813 aa7.75□□□□□ -1.17
CSDE1-201ENST00000261443 ALG3Q92685 438 aa7.75□□□□□ -1.17
CSDE1-201ENST00000261443 GATA6Q92908 595 aa7.75□□□□□ -1.17
CSDE1-201ENST00000261443 SLC4A9Q96Q91 983 aa7.75□□□□□ -1.17
CSDE1-201ENST00000261443 RIOK1Q9BRS2 568 aaKnown RBP7.75□□□□□ -1.17
CSDE1-201ENST00000261443 MMADHCQ9H3L0 296 aaPredicted RBP7.75□□□□□ -1.17
CSDE1-201ENST00000261443 PREBQ9HCU5 417 aa7.75□□□□□ -1.17
CSDE1-201ENST00000261443 METTL5Q9NRN9 209 aaKnown RBP7.75□□□□□ -1.17
CSDE1-201ENST00000261443 CCDC87Q9NVE4 849 aa7.75□□□□□ -1.17
CSDE1-201ENST00000261443 TBK1Q9UHD2 729 aa7.75□□□□□ -1.17
CSDE1-201ENST00000261443 DDX52Q9Y2R4 599 aaKnown RBP eCLIP7.75□□□□□ -1.17
CSDE1-201ENST00000261443 STARD13Q9Y3M8 1113 aa7.75□□□□□ -1.17
CSDE1-201ENST00000261443 WNK3Q9BYP7 1800 aa7.75□□□□□ -1.17
CSDE1-201ENST00000261443 SYNGAP1Q96PV0 1343 aa7.75□□□□□ -1.17
CSDE1-201ENST00000261443 ANKRD63C9JTQ0 380 aa7.74□□□□□ -1.17
CSDE1-201ENST00000261443 GFPT2O94808 682 aa7.74□□□□□ -1.17
CSDE1-201ENST00000261443 HSPA6P17066 643 aa7.74□□□□□ -1.17
CSDE1-201ENST00000261443 VCAM1P19320 739 aa7.74□□□□□ -1.17
CSDE1-201ENST00000261443 RXRBP28702 533 aa7.74□□□□□ -1.17
CSDE1-201ENST00000261443 PTPN4P29074 926 aa7.74□□□□□ -1.17
CSDE1-201ENST00000261443 HSPA2P54652 639 aa7.74□□□□□ -1.17
CSDE1-201ENST00000261443 NAPAP54920 295 aa7.74□□□□□ -1.17
CSDE1-201ENST00000261443 PPATQ06203 517 aa7.74□□□□□ -1.17
CSDE1-201ENST00000261443 DNAJC3Q13217 504 aa7.74□□□□□ -1.17
CSDE1-201ENST00000261443 KPNB1Q14974 876 aaKnown RBP7.74□□□□□ -1.17
CSDE1-201ENST00000261443 TNIP1Q15025 636 aa7.74□□□□□ -1.17
CSDE1-201ENST00000261443 CALCRLQ16602 461 aa7.74□□□□□ -1.17
CSDE1-201ENST00000261443 KRT79Q5XKE5 535 aa7.74□□□□□ -1.17
CSDE1-201ENST00000261443 RFWD3Q6PCD5 774 aa7.74□□□□□ -1.17
CSDE1-201ENST00000261443 KCNK18Q7Z418 384 aa7.74□□□□□ -1.17
CSDE1-201ENST00000261443 MIPOL1Q8TD10 442 aa7.74□□□□□ -1.17
CSDE1-201ENST00000261443 NRG4Q8WWG1 115 aa7.74□□□□□ -1.17
CSDE1-201ENST00000261443 LBHD1Q9BQE6 289 aaPredicted RBP7.74□□□□□ -1.17
CSDE1-201ENST00000261443 FGFBP2Q9BYJ0 223 aa7.74□□□□□ -1.17
CSDE1-201ENST00000261443 PHTF1Q9UMS5 762 aa7.74□□□□□ -1.17
CSDE1-201ENST00000261443 RREB1Q92766 1687 aa7.74□□□□□ -1.17
CSDE1-201ENST00000261443 COL22A1Q8NFW1 1626 aaPredicted RBP7.74□□□□□ -1.17
CSDE1-201ENST00000261443 POTEMA6NI47 508 aa7.74□□□□□ -1.17
CSDE1-201ENST00000261443 CAPN9O14815 690 aa7.74□□□□□ -1.17
CSDE1-201ENST00000261443 MAP3K7O43318 606 aa7.74□□□□□ -1.17
CSDE1-201ENST00000261443 FAM163BP0C2L3 166 aa7.74□□□□□ -1.17
CSDE1-201ENST00000261443 UBTFL6P0CB48 400 aaPredicted RBP7.74□□□□□ -1.17
CSDE1-201ENST00000261443 CDR2Q01850 454 aa7.74□□□□□ -1.17
CSDE1-201ENST00000261443 SLC34A1Q06495 639 aa7.74□□□□□ -1.17
CSDE1-201ENST00000261443 GIT2Q14161 759 aa7.74□□□□□ -1.17
CSDE1-201ENST00000261443 C4orf50Q6ZRC1 276 aa7.74□□□□□ -1.17
CSDE1-201ENST00000261443 GLYCTKQ8IVS8 523 aa7.74□□□□□ -1.17
CSDE1-201ENST00000261443 TBCKQ8TEA7 893 aa7.74□□□□□ -1.17
CSDE1-201ENST00000261443 DDX50Q9BQ39 737 aaKnown RBP7.74□□□□□ -1.17
CSDE1-201ENST00000261443 RAB34Q9BZG1 259 aa7.74□□□□□ -1.17
CSDE1-201ENST00000261443 SUDS3Q9H7L9 328 aaPredicted RBP7.74□□□□□ -1.17
CSDE1-201ENST00000261443 LARSQ9P2J5 1176 aaKnown RBP7.74□□□□□ -1.17
CSDE1-201ENST00000261443 PCDHA3Q9Y5H8 950 aa7.74□□□□□ -1.17
CSDE1-201ENST00000261443 NCANO14594 1321 aa7.74□□□□□ -1.17
CSDE1-201ENST00000261443 PASKQ96RG2 1323 aa7.74□□□□□ -1.17
CSDE1-201ENST00000261443 IGSF9BQ9UPX0 1349 aa7.74□□□□□ -1.17
CSDE1-201ENST00000261443 ARAP2Q8WZ64 1704 aa7.74□□□□□ -1.17
CSDE1-201ENST00000261443 TRAFD1O14545 582 aaPredicted RBP7.74□□□□□ -1.17
CSDE1-201ENST00000261443 KRT36O76013 467 aa7.74□□□□□ -1.17
CSDE1-201ENST00000261443 PENKP01210 267 aaPredicted RBP7.74□□□□□ -1.17
CSDE1-201ENST00000261443 TMEM253P0C7T8 217 aa7.74□□□□□ -1.17
CSDE1-201ENST00000261443 ZCCHC18P0CG32 403 aa7.74□□□□□ -1.17
CSDE1-201ENST00000261443 NR2F2P24468 414 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms