RNA–Protein interactions for RNA: ENST00000260130.8

SDCBP-201, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDCBP, Length 2,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-201ENST00000260130 DGKIO75912 1065 aa18.49■□□□□ 0.55
SDCBP-201ENST00000260130 PPP2R2DQ66LE6 453 aa18.49■□□□□ 0.55
SDCBP-201ENST00000260130 TWF2Q6IBS0 349 aaKnown RBP18.49■□□□□ 0.55
SDCBP-201ENST00000260130 Q7L0L9 218 aa18.49■□□□□ 0.55
SDCBP-201ENST00000260130 ELAC1Q9H777 363 aaKnown RBP18.49■□□□□ 0.55
SDCBP-201ENST00000260130 CCDC169A6NNP5 214 aa18.48■□□□□ 0.55
SDCBP-201ENST00000260130 TSPAN1O60635 241 aa18.48■□□□□ 0.55
SDCBP-201ENST00000260130 AXLP30530 894 aa18.48■□□□□ 0.55
SDCBP-201ENST00000260130 NPTX2P47972 431 aa18.48■□□□□ 0.55
SDCBP-201ENST00000260130 DMP1Q13316 513 aaPredicted RBP18.48■□□□□ 0.55
SDCBP-201ENST00000260130 AMHR2Q16671 573 aa18.48■□□□□ 0.55
SDCBP-201ENST00000260130 SV2BQ7L1I2 683 aa18.48■□□□□ 0.55
SDCBP-201ENST00000260130 FZD8Q9H461 694 aa18.48■□□□□ 0.55
SDCBP-201ENST00000260130 PRMT7Q9NVM4 692 aaPredicted RBP18.48■□□□□ 0.55
SDCBP-201ENST00000260130 TMEM161AQ9NX61 479 aa18.48■□□□□ 0.55
SDCBP-201ENST00000260130 FAM13BQ9NYF5 915 aa18.48■□□□□ 0.55
SDCBP-201ENST00000260130 KCNG1Q9UIX4 513 aa18.48■□□□□ 0.55
SDCBP-201ENST00000260130 ODF2LQ9ULJ1 636 aa18.48■□□□□ 0.55
SDCBP-201ENST00000260130 KRT18P05783 430 aaKnown RBP18.48■□□□□ 0.55
SDCBP-201ENST00000260130 EFNA5P52803 228 aa18.48■□□□□ 0.55
SDCBP-201ENST00000260130 CACNB1Q02641 598 aaPredicted RBP18.48■□□□□ 0.55
SDCBP-201ENST00000260130 RESP18Q5W5W9 173 aa18.48■□□□□ 0.55
SDCBP-201ENST00000260130 ADALQ6DHV7 355 aa18.48■□□□□ 0.55
SDCBP-201ENST00000260130 ECHDC2Q86YB7 292 aa18.48■□□□□ 0.55
SDCBP-201ENST00000260130 SP7Q8TDD2 431 aaPredicted RBP18.48■□□□□ 0.55
SDCBP-201ENST00000260130 ZNF689Q96CS4 500 aaPredicted RBP18.48■□□□□ 0.55
SDCBP-201ENST00000260130 PRIMPOLQ96LW4 560 aa18.48■□□□□ 0.55
SDCBP-201ENST00000260130 FAM161BQ96MY7 647 aa18.48■□□□□ 0.55
SDCBP-201ENST00000260130 REEP2Q9BRK0 252 aa18.48■□□□□ 0.55
SDCBP-201ENST00000260130 KIFC3Q9BVG8 833 aa18.48■□□□□ 0.55
SDCBP-201ENST00000260130 TTC3P53804 2025 aa18.48■□□□□ 0.55
SDCBP-201ENST00000260130 CDH23Q9H251 3354 aa18.48■□□□□ 0.55
SDCBP-201ENST00000260130 ADGRA3Q8IWK6 1321 aa18.47■□□□□ 0.55
SDCBP-201ENST00000260130 PLS3P13797 630 aa18.47■□□□□ 0.55
SDCBP-201ENST00000260130 TAP1Q03518 808 aa18.47■□□□□ 0.55
SDCBP-201ENST00000260130 GIT2Q14161 759 aa18.47■□□□□ 0.55
SDCBP-201ENST00000260130 MAPK6Q16659 721 aa18.47■□□□□ 0.55
SDCBP-201ENST00000260130 CSPP1Q1MSJ5 1256 aa18.47■□□□□ 0.55
SDCBP-201ENST00000260130 PPP4R3CPQ6ZMV5 832 aa18.47■□□□□ 0.55
SDCBP-201ENST00000260130 NTPCRQ9BSD7 190 aaKnown RBP18.47■□□□□ 0.55
SDCBP-201ENST00000260130 RC3H2Q9HBD1 1191 aaKnown RBP18.47■□□□□ 0.55
SDCBP-201ENST00000260130 KMT5AQ9NQR1 393 aa18.47■□□□□ 0.55
SDCBP-201ENST00000260130 LARSQ9P2J5 1176 aaKnown RBP18.47■□□□□ 0.55
SDCBP-201ENST00000260130 ARHGEF15O94989 841 aa18.47■□□□□ 0.55
SDCBP-201ENST00000260130 LETM1O95202 739 aaPredicted RBP18.47■□□□□ 0.55
SDCBP-201ENST00000260130 EOMESO95936 686 aa18.47■□□□□ 0.55
SDCBP-201ENST00000260130 SKIP12755 728 aa18.47■□□□□ 0.55
SDCBP-201ENST00000260130 FAM187BQ17R55 369 aa18.47■□□□□ 0.55
SDCBP-201ENST00000260130 NOTUMQ6P988 496 aa18.47■□□□□ 0.55
SDCBP-201ENST00000260130 CPB2Q96IY4 423 aa18.47■□□□□ 0.55
SDCBP-201ENST00000260130 CCDC113Q9H0I3 377 aa18.47■□□□□ 0.55
SDCBP-201ENST00000260130 FAM105AQ9NUU6 356 aa18.47■□□□□ 0.55
SDCBP-201ENST00000260130 LINC01553A4QN01 128 aa18.46■□□□□ 0.55
SDCBP-201ENST00000260130 B4GALT5O43286 388 aa18.46■□□□□ 0.55
SDCBP-201ENST00000260130 ARF4P18085 180 aaPredicted RBP18.46■□□□□ 0.55
SDCBP-201ENST00000260130 E2F4Q16254 413 aa18.46■□□□□ 0.55
SDCBP-201ENST00000260130 IQUBQ8NA54 791 aa18.46■□□□□ 0.55
SDCBP-201ENST00000260130 SPIRE2Q8WWL2 714 aa18.46■□□□□ 0.55
SDCBP-201ENST00000260130 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.46■□□□□ 0.55
SDCBP-201ENST00000260130 K7ERI5 159 aa18.45■□□□□ 0.54
SDCBP-201ENST00000260130 ACKR2O00590 384 aa18.45■□□□□ 0.54
SDCBP-201ENST00000260130 ZNF623O75123 536 aa18.45■□□□□ 0.54
SDCBP-201ENST00000260130 GADD45BO75293 160 aaPredicted RBP18.45■□□□□ 0.54
SDCBP-201ENST00000260130 LIG1P18858 919 aa18.45■□□□□ 0.54
SDCBP-201ENST00000260130 CMA1P23946 247 aa18.45■□□□□ 0.54
SDCBP-201ENST00000260130 RAB27AP51159 221 aa18.45■□□□□ 0.54
SDCBP-201ENST00000260130 SMTNP53814 917 aa18.45■□□□□ 0.54
SDCBP-201ENST00000260130 UVSSAQ2YD98 709 aa18.45■□□□□ 0.54
SDCBP-201ENST00000260130 GLIPR1L2Q4G1C9 344 aa18.45■□□□□ 0.54
SDCBP-201ENST00000260130 ZNF598Q86UK7 904 aaKnown RBP18.45■□□□□ 0.54
SDCBP-201ENST00000260130 RNF169Q8NCN4 708 aa18.45■□□□□ 0.54
SDCBP-201ENST00000260130 RNF214Q8ND24 703 aa18.45■□□□□ 0.54
SDCBP-201ENST00000260130 DHX58Q96C10 678 aa18.45■□□□□ 0.54
SDCBP-201ENST00000260130 CCDC51Q96ER9 411 aa18.45■□□□□ 0.54
SDCBP-201ENST00000260130 CUEDC2Q9H467 287 aa18.45■□□□□ 0.54
SDCBP-201ENST00000260130 GDPD2Q9HCC8 539 aa18.45■□□□□ 0.54
SDCBP-201ENST00000260130 ARHGAP28Q9P2N2 729 aa18.45■□□□□ 0.54
SDCBP-201ENST00000260130 GBF1Q92538 1859 aa18.45■□□□□ 0.54
SDCBP-201ENST00000260130 A0A1B0GUA9 196 aa18.45■□□□□ 0.54
SDCBP-201ENST00000260130 POLR2DO15514 142 aaKnown RBP18.45■□□□□ 0.54
SDCBP-201ENST00000260130 FAM13AO94988 1023 aa18.45■□□□□ 0.54
SDCBP-201ENST00000260130 PRKCBP05771 671 aa18.45■□□□□ 0.54
SDCBP-201ENST00000260130 ZNF131P52739 623 aa18.45■□□□□ 0.54
SDCBP-201ENST00000260130 BTG3Q14201 252 aaPredicted RBP18.45■□□□□ 0.54
SDCBP-201ENST00000260130 UBXN11Q5T124 520 aa18.45■□□□□ 0.54
SDCBP-201ENST00000260130 CCDC183Q5T5S1 534 aa18.45■□□□□ 0.54
SDCBP-201ENST00000260130 DYMQ7RTS9 669 aa18.45■□□□□ 0.54
SDCBP-201ENST00000260130 DDX12PQ92771 950 aa18.45■□□□□ 0.54
SDCBP-201ENST00000260130 TMEM134Q9H6X4 195 aa18.45■□□□□ 0.54
SDCBP-201ENST00000260130 PARVGQ9HBI0 331 aa18.45■□□□□ 0.54
SDCBP-201ENST00000260130 MTMR10Q9NXD2 777 aa18.45■□□□□ 0.54
SDCBP-201ENST00000260130 PCDHB2Q9Y5E7 798 aa18.45■□□□□ 0.54
SDCBP-201ENST00000260130 MYMKA6NI61 221 aa18.44■□□□□ 0.54
SDCBP-201ENST00000260130 SLC16A4O15374 487 aa18.44■□□□□ 0.54
SDCBP-201ENST00000260130 HOXA2O43364 376 aa18.44■□□□□ 0.54
SDCBP-201ENST00000260130 FGFR1P11362 822 aa18.44■□□□□ 0.54
SDCBP-201ENST00000260130 ATF7P17544 494 aaPredicted RBP18.44■□□□□ 0.54
SDCBP-201ENST00000260130 GATMP50440 423 aa18.44■□□□□ 0.54
SDCBP-201ENST00000260130 PRPF4BQ13523 1007 aaKnown RBP18.44■□□□□ 0.54
SDCBP-201ENST00000260130 GRIN2CQ14957 1233 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms