RNA–Protein interactions for RNA: ENST00000259808.8

RIPK1-201, Transcript of receptor interacting serine/threonine kinase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RIPK1, Length 4,160 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK1-201ENST00000259808 ZNF473Q8WTR7 871 aaKnown RBP16.27■□□□□ 0.19
RIPK1-201ENST00000259808 TMEM143Q96AN5 459 aa16.27■□□□□ 0.19
RIPK1-201ENST00000259808 PRMT1Q99873 361 aaKnown RBP16.27■□□□□ 0.19
RIPK1-201ENST00000259808 AGPAT1Q99943 283 aa16.27■□□□□ 0.19
RIPK1-201ENST00000259808 RNF146Q9NTX7 359 aa16.27■□□□□ 0.19
RIPK1-201ENST00000259808 HAUS2Q9NVX0 235 aa16.27■□□□□ 0.19
RIPK1-201ENST00000259808 MYBL2P10244 700 aa16.27■□□□□ 0.19
RIPK1-201ENST00000259808 KITP10721 976 aa16.27■□□□□ 0.19
RIPK1-201ENST00000259808 POLR2BP30876 1174 aaKnown RBP16.27■□□□□ 0.19
RIPK1-201ENST00000259808 PPP2R5AQ15172 486 aa16.27■□□□□ 0.19
RIPK1-201ENST00000259808 SLC51AQ86UW1 340 aa16.27■□□□□ 0.19
RIPK1-201ENST00000259808 SPATS2Q86XZ4 545 aaKnown RBP16.27■□□□□ 0.19
RIPK1-201ENST00000259808 KIF2BQ8N4N8 673 aa16.27■□□□□ 0.19
RIPK1-201ENST00000259808 KCNQ5Q9NR82 932 aa16.27■□□□□ 0.19
RIPK1-201ENST00000259808 HESX1Q9UBX0 185 aa16.27■□□□□ 0.19
RIPK1-201ENST00000259808 NEURL4Q96JN8 1562 aa16.26■□□□□ 0.19
RIPK1-201ENST00000259808 TMEM150BA6NC51 233 aa16.26■□□□□ 0.19
RIPK1-201ENST00000259808 FOXN3O00409 490 aaPredicted RBP16.26■□□□□ 0.19
RIPK1-201ENST00000259808 TLR3O15455 904 aaKnown RBP16.26■□□□□ 0.19
RIPK1-201ENST00000259808 AKAP3O75969 853 aa16.26■□□□□ 0.19
RIPK1-201ENST00000259808 KLHDC7AQ5VTJ3 777 aa16.26■□□□□ 0.19
RIPK1-201ENST00000259808 ATG4AQ8WYN0 398 aa16.26■□□□□ 0.19
RIPK1-201ENST00000259808 MAML1Q92585 1016 aa16.26■□□□□ 0.19
RIPK1-201ENST00000259808 TMEM39BQ9GZU3 492 aa16.26■□□□□ 0.19
RIPK1-201ENST00000259808 NRBP2Q9NSY0 501 aa16.26■□□□□ 0.19
RIPK1-201ENST00000259808 PHBP35232 272 aa16.26■□□□□ 0.19
RIPK1-201ENST00000259808 VPS72Q15906 364 aa16.26■□□□□ 0.19
RIPK1-201ENST00000259808 CCDC93Q567U6 631 aa16.26■□□□□ 0.19
RIPK1-201ENST00000259808 LGSNQ5TDP6 509 aa16.26■□□□□ 0.19
RIPK1-201ENST00000259808 ARHGEF18Q6ZSZ5 1173 aa16.26■□□□□ 0.19
RIPK1-201ENST00000259808 ERICH1Q86X53 443 aa16.26■□□□□ 0.19
RIPK1-201ENST00000259808 USP38Q8NB14 1042 aa16.26■□□□□ 0.19
RIPK1-201ENST00000259808 POP1Q99575 1024 aaKnown RBP16.26■□□□□ 0.19
RIPK1-201ENST00000259808 FAM49AQ9H0Q0 323 aaPredicted RBP16.26■□□□□ 0.19
RIPK1-201ENST00000259808 COMTP21964 271 aa16.26■□□□□ 0.19
RIPK1-201ENST00000259808 SCP2P22307 547 aa16.26■□□□□ 0.19
RIPK1-201ENST00000259808 GPS1Q13098 491 aa16.26■□□□□ 0.19
RIPK1-201ENST00000259808 NAB2Q15742 525 aa16.26■□□□□ 0.19
RIPK1-201ENST00000259808 FRMD5Q7Z6J6 570 aa16.26■□□□□ 0.19
RIPK1-201ENST00000259808 MYCBPQ99417 103 aaPredicted RBP16.26■□□□□ 0.19
RIPK1-201ENST00000259808 FNDC3AQ9Y2H6 1198 aaKnown RBP16.26■□□□□ 0.19
RIPK1-201ENST00000259808 MT-ND3P03897 115 aa16.25■□□□□ 0.19
RIPK1-201ENST00000259808 P4HBP07237 508 aaKnown RBP16.25■□□□□ 0.19
RIPK1-201ENST00000259808 KRT17Q04695 432 aa16.25■□□□□ 0.19
RIPK1-201ENST00000259808 SLC29A2Q14542 456 aa16.25■□□□□ 0.19
RIPK1-201ENST00000259808 ZC3H18Q86VM9 953 aaKnown RBP16.25■□□□□ 0.19
RIPK1-201ENST00000259808 PDCD7Q8N8D1 485 aaKnown RBP16.25■□□□□ 0.19
RIPK1-201ENST00000259808 SCFD1Q8WVM8 642 aa16.25■□□□□ 0.19
RIPK1-201ENST00000259808 HEXIM2Q96MH2 286 aaKnown RBP16.25■□□□□ 0.19
RIPK1-201ENST00000259808 ARHGAP23Q9P227 1491 aa16.25■□□□□ 0.19
RIPK1-201ENST00000259808 TCP11X1B4DZS4 312 aa16.25■□□□□ 0.19
RIPK1-201ENST00000259808 CHN1P15882 459 aa16.25■□□□□ 0.19
RIPK1-201ENST00000259808 PSMA2P25787 234 aa16.25■□□□□ 0.19
RIPK1-201ENST00000259808 RASSF2P50749 326 aa16.25■□□□□ 0.19
RIPK1-201ENST00000259808 CENPPQ6IPU0 288 aa16.25■□□□□ 0.19
RIPK1-201ENST00000259808 TRIM50Q86XT4 487 aa16.25■□□□□ 0.19
RIPK1-201ENST00000259808 C4orf33Q8N1A6 199 aa16.25■□□□□ 0.19
RIPK1-201ENST00000259808 WRNIP1Q96S55 665 aa16.25■□□□□ 0.19
RIPK1-201ENST00000259808 IKZF4Q9H2S9 585 aa16.25■□□□□ 0.19
RIPK1-201ENST00000259808 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.25■□□□□ 0.19
RIPK1-201ENST00000259808 SYNGAP1Q96PV0 1343 aa16.25■□□□□ 0.19
RIPK1-201ENST00000259808 DDTLA6NHG4 134 aaPredicted RBP16.25■□□□□ 0.19
RIPK1-201ENST00000259808 MSH4O15457 936 aa16.25■□□□□ 0.19
RIPK1-201ENST00000259808 MAP3K6O95382 1288 aa16.25■□□□□ 0.19
RIPK1-201ENST00000259808 SOX10P56693 466 aa16.25■□□□□ 0.19
RIPK1-201ENST00000259808 KIAA1755Q5JYT7 1200 aa16.25■□□□□ 0.19
RIPK1-201ENST00000259808 APEX2Q9UBZ4 518 aa16.25■□□□□ 0.19
RIPK1-201ENST00000259808 ADCY2Q08462 1091 aa16.24■□□□□ 0.19
RIPK1-201ENST00000259808 ZNF571Q7Z3V5 609 aaPredicted RBP16.24■□□□□ 0.19
RIPK1-201ENST00000259808 ZBED8Q8IZ13 594 aa16.24■□□□□ 0.19
RIPK1-201ENST00000259808 SMC1BQ8NDV3 1235 aa16.24■□□□□ 0.19
RIPK1-201ENST00000259808 MED10Q9BTT4 135 aa16.24■□□□□ 0.19
RIPK1-201ENST00000259808 DDX23Q9BUQ8 820 aaKnown RBP16.24■□□□□ 0.19
RIPK1-201ENST00000259808 TMEM117Q9H0C3 514 aa16.24■□□□□ 0.19
RIPK1-201ENST00000259808 MRPL47Q9HD33 250 aaKnown RBP16.24■□□□□ 0.19
RIPK1-201ENST00000259808 ACP6Q9NPH0 428 aa16.24■□□□□ 0.19
RIPK1-201ENST00000259808 HSPBP1Q9NZL4 362 aa16.24■□□□□ 0.19
RIPK1-201ENST00000259808 TPX2Q9ULW0 747 aaKnown RBP16.24■□□□□ 0.19
RIPK1-201ENST00000259808 TOM1L1O75674 476 aa16.24■□□□□ 0.19
RIPK1-201ENST00000259808 EIF3BP55884 814 aaKnown RBP16.24■□□□□ 0.19
RIPK1-201ENST00000259808 TMCO4Q5TGY1 634 aa16.24■□□□□ 0.19
RIPK1-201ENST00000259808 KRT39Q6A163 491 aa16.24■□□□□ 0.19
RIPK1-201ENST00000259808 ZFPM1Q8IX07 1006 aa16.24■□□□□ 0.19
RIPK1-201ENST00000259808 PNMA5Q96PV4 448 aa16.24■□□□□ 0.19
RIPK1-201ENST00000259808 CCDC195A0A1B0GUA6 201 aa16.24■□□□□ 0.19
RIPK1-201ENST00000259808 MEFVO15553 781 aaPredicted RBP16.24■□□□□ 0.19
RIPK1-201ENST00000259808 HSD17B3P37058 310 aa16.24■□□□□ 0.19
RIPK1-201ENST00000259808 CHMP6Q96FZ7 201 aa16.24■□□□□ 0.19
RIPK1-201ENST00000259808 PCDHAC2Q9Y5I4 1007 aa16.24■□□□□ 0.19
RIPK1-201ENST00000259808 TACC3Q9Y6A5 838 aa16.24■□□□□ 0.19
RIPK1-201ENST00000259808 WDR64B1ANS9 1081 aa16.23■□□□□ 0.19
RIPK1-201ENST00000259808 PODXLO00592 558 aa16.23■□□□□ 0.19
RIPK1-201ENST00000259808 HMGCS2P54868 508 aa16.23■□□□□ 0.19
RIPK1-201ENST00000259808 DCAF15Q66K64 600 aa16.23■□□□□ 0.19
RIPK1-201ENST00000259808 LRP10Q7Z4F1 713 aa16.23■□□□□ 0.19
RIPK1-201ENST00000259808 RTFDC1Q9BY42 306 aaPredicted RBP16.23■□□□□ 0.19
RIPK1-201ENST00000259808 CNOT10Q9H9A5 744 aaKnown RBP16.23■□□□□ 0.19
RIPK1-201ENST00000259808 ETNK1Q9HBU6 452 aa16.23■□□□□ 0.19
RIPK1-201ENST00000259808 SLC24A3Q9HC58 644 aa16.23■□□□□ 0.19
RIPK1-201ENST00000259808 JCADQ9P266 1359 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms