RNA–Protein interactions for RNA: ENST00000259043.11

TRA2B-201, Transcript of transformer 2 beta homolog, humanhuman

TSL 3

Gene TRA2B, Length 943 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-201ENST00000259043 SDE2Q6IQ49 451 aa6.86□□□□□ -1.31
TRA2B-201ENST00000259043 ZNF575Q86XF7 245 aa6.86□□□□□ -1.31
TRA2B-201ENST00000259043 ANKRD53Q8N9V6 530 aa6.86□□□□□ -1.31
TRA2B-201ENST00000259043 GCDHQ92947 438 aaPredicted RBP6.86□□□□□ -1.31
TRA2B-201ENST00000259043 OSBPL6Q9BZF3 934 aa6.86□□□□□ -1.31
TRA2B-201ENST00000259043 TRIM8Q9BZR9 551 aa6.86□□□□□ -1.31
TRA2B-201ENST00000259043 IKZF4Q9H2S9 585 aa6.86□□□□□ -1.31
TRA2B-201ENST00000259043 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.86□□□□□ -1.31
TRA2B-201ENST00000259043 TMPRSS11EQ9UL52 423 aa6.86□□□□□ -1.31
TRA2B-201ENST00000259043 BIVM-ERCC5R4GMW8 1640 aa6.86□□□□□ -1.31
TRA2B-201ENST00000259043 LSP1P33241 339 aa6.85□□□□□ -1.31
TRA2B-201ENST00000259043 SPTY2D1Q68D10 685 aaPredicted RBP6.85□□□□□ -1.31
TRA2B-201ENST00000259043 ESPNLQ6ZVH7 1005 aa6.85□□□□□ -1.31
TRA2B-201ENST00000259043 EXTL1Q92935 676 aa6.85□□□□□ -1.31
TRA2B-201ENST00000259043 RPL10LQ96L21 214 aaKnown RBP6.85□□□□□ -1.31
TRA2B-201ENST00000259043 NOL10Q9BSC4 688 aaKnown RBP6.85□□□□□ -1.31
TRA2B-201ENST00000259043 HECAQ9UBI9 543 aaPredicted RBP6.85□□□□□ -1.31
TRA2B-201ENST00000259043 TOP2BQ02880 1626 aa6.84□□□□□ -1.31
TRA2B-201ENST00000259043 PRSS38A1L453 326 aa6.84□□□□□ -1.31
TRA2B-201ENST00000259043 TOX4O94842 621 aa6.84□□□□□ -1.31
TRA2B-201ENST00000259043 PCDH8O95206 1070 aa6.84□□□□□ -1.31
TRA2B-201ENST00000259043 VSIG10L2P0DP72 767 aa6.84□□□□□ -1.31
TRA2B-201ENST00000259043 LSM12Q3MHD2 195 aaKnown RBP6.84□□□□□ -1.31
TRA2B-201ENST00000259043 BROXQ5VW32 411 aa6.84□□□□□ -1.31
TRA2B-201ENST00000259043 CXorf67Q86X51 503 aaPredicted RBP6.84□□□□□ -1.31
TRA2B-201ENST00000259043 LYSMD2Q8IV50 215 aa6.84□□□□□ -1.31
TRA2B-201ENST00000259043 SLC5A5Q92911 643 aa6.84□□□□□ -1.31
TRA2B-201ENST00000259043 FAM89AQ96GI7 184 aa6.84□□□□□ -1.31
TRA2B-201ENST00000259043 TMEM176AQ96HP8 235 aa6.84□□□□□ -1.31
TRA2B-201ENST00000259043 TMA7Q9Y2S6 64 aaKnown RBP6.84□□□□□ -1.31
TRA2B-201ENST00000259043 SH3BP1Q9Y3L3 701 aa6.84□□□□□ -1.31
TRA2B-201ENST00000259043 PPP2R3BQ9Y5P8 575 aa6.84□□□□□ -1.31
TRA2B-201ENST00000259043 GLI2P10070 1586 aa6.83□□□□□ -1.32
TRA2B-201ENST00000259043 A0A1W2PRX2 142 aa6.83□□□□□ -1.32
TRA2B-201ENST00000259043 MAFGO15525 162 aa6.83□□□□□ -1.32
TRA2B-201ENST00000259043 SEC24DO94855 1032 aaPredicted RBP6.83□□□□□ -1.32
TRA2B-201ENST00000259043 GAAP10253 952 aa6.83□□□□□ -1.32
TRA2B-201ENST00000259043 KIR2DL3P43628 341 aa6.83□□□□□ -1.32
TRA2B-201ENST00000259043 MANFP55145 182 aaKnown RBP6.83□□□□□ -1.32
TRA2B-201ENST00000259043 STRA8Q7Z7C7 330 aa6.83□□□□□ -1.32
TRA2B-201ENST00000259043 SLC41A1Q8IVJ1 513 aa6.83□□□□□ -1.32
TRA2B-201ENST00000259043 HIST1H2AHQ96KK5 128 aa6.83□□□□□ -1.32
TRA2B-201ENST00000259043 MPHOSPH9Q99550 1183 aa6.83□□□□□ -1.32
TRA2B-201ENST00000259043 HIST1H2AJQ99878 128 aa6.83□□□□□ -1.32
TRA2B-201ENST00000259043 FDXACB1Q9BRP7 624 aaPredicted RBP6.83□□□□□ -1.32
TRA2B-201ENST00000259043 TLR9Q9NR96 1032 aa6.83□□□□□ -1.32
TRA2B-201ENST00000259043 SYNPO2Q9UMS6 1093 aa6.83□□□□□ -1.32
TRA2B-201ENST00000259043 PCDHB6Q9Y5E3 794 aa6.83□□□□□ -1.32
TRA2B-201ENST00000259043 NEMP1O14524 444 aa6.82□□□□□ -1.32
TRA2B-201ENST00000259043 MTSS1O43312 755 aa6.82□□□□□ -1.32
TRA2B-201ENST00000259043 ACRV1P26436 265 aa6.82□□□□□ -1.32
TRA2B-201ENST00000259043 ID4P47928 161 aa6.82□□□□□ -1.32
TRA2B-201ENST00000259043 DDB1Q16531 1140 aa6.82□□□□□ -1.32
TRA2B-201ENST00000259043 FRMD7Q6ZUT3 714 aa6.82□□□□□ -1.32
TRA2B-201ENST00000259043 GAREM2Q75VX8 874 aa6.82□□□□□ -1.32
TRA2B-201ENST00000259043 C11orf74Q86VG3 221 aa6.82□□□□□ -1.32
TRA2B-201ENST00000259043 D2HGDHQ8N465 521 aa6.82□□□□□ -1.32
TRA2B-201ENST00000259043 CDYL2Q8N8U2 506 aa6.82□□□□□ -1.32
TRA2B-201ENST00000259043 PIK3C3Q8NEB9 887 aa6.82□□□□□ -1.32
TRA2B-201ENST00000259043 FBXO41Q8TF61 875 aa6.82□□□□□ -1.32
TRA2B-201ENST00000259043 PRDM12Q9H4Q4 367 aa6.82□□□□□ -1.32
TRA2B-201ENST00000259043 C14orf93Q9H972 538 aaKnown RBP6.82□□□□□ -1.32
TRA2B-201ENST00000259043 IL23AQ9NPF7 189 aa6.82□□□□□ -1.32
TRA2B-201ENST00000259043 NUMBLQ9Y6R0 609 aa6.82□□□□□ -1.32
TRA2B-201ENST00000259043 UBE2QL1A1L167 161 aa6.81□□□□□ -1.32
TRA2B-201ENST00000259043 DAPK3O43293 454 aa6.81□□□□□ -1.32
TRA2B-201ENST00000259043 JUNP05412 331 aaKnown RBP6.81□□□□□ -1.32
TRA2B-201ENST00000259043 MASP1P48740 699 aa6.81□□□□□ -1.32
TRA2B-201ENST00000259043 INHBCP55103 352 aa6.81□□□□□ -1.32
TRA2B-201ENST00000259043 DGCR2P98153 550 aa6.81□□□□□ -1.32
TRA2B-201ENST00000259043 CD69Q07108 199 aa6.81□□□□□ -1.32
TRA2B-201ENST00000259043 MAN2A1Q16706 1144 aa6.81□□□□□ -1.32
TRA2B-201ENST00000259043 ATP13A4Q4VNC1 1196 aa6.81□□□□□ -1.32
TRA2B-201ENST00000259043 RASSF3Q86WH2 238 aa6.81□□□□□ -1.32
TRA2B-201ENST00000259043 UNC5BQ8IZJ1 945 aa6.81□□□□□ -1.32
TRA2B-201ENST00000259043 IL17DQ8TAD2 202 aa6.81□□□□□ -1.32
TRA2B-201ENST00000259043 FERMT2Q96AC1 680 aa6.81□□□□□ -1.32
TRA2B-201ENST00000259043 KDM1AO60341 852 aa6.8□□□□□ -1.32
TRA2B-201ENST00000259043 FSBPO95073 299 aa6.8□□□□□ -1.32
TRA2B-201ENST00000259043 HIBADHP31937 336 aaKnown RBP6.8□□□□□ -1.32
TRA2B-201ENST00000259043 GPR15P49685 360 aa6.8□□□□□ -1.32
TRA2B-201ENST00000259043 PDCD1Q15116 288 aa6.8□□□□□ -1.32
TRA2B-201ENST00000259043 FAM111BQ6SJ93 734 aa6.8□□□□□ -1.32
TRA2B-201ENST00000259043 DDX46Q7L014 1031 aaKnown RBP6.8□□□□□ -1.32
TRA2B-201ENST00000259043 C1orf210Q8IVY1 113 aa6.8□□□□□ -1.32
TRA2B-201ENST00000259043 UBR7Q8N806 425 aa6.8□□□□□ -1.32
TRA2B-201ENST00000259043 USP7Q93009 1102 aa6.8□□□□□ -1.32
TRA2B-201ENST00000259043 ENKD1Q9H0I2 346 aa6.8□□□□□ -1.32
TRA2B-201ENST00000259043 WNT8AQ9H1J5 351 aa6.8□□□□□ -1.32
TRA2B-201ENST00000259043 IFT22Q9H7X7 185 aa6.8□□□□□ -1.32
TRA2B-201ENST00000259043 CUL7Q14999 1698 aa6.8□□□□□ -1.32
TRA2B-201ENST00000259043 KIAA0586Q9BVV6 1533 aa6.8□□□□□ -1.32
TRA2B-201ENST00000259043 MAP3K4Q9Y6R4 1608 aa6.79□□□□□ -1.32
TRA2B-201ENST00000259043 A0A087X1B8 175 aa6.79□□□□□ -1.32
TRA2B-201ENST00000259043 ST20-MTHFSA0A0A6YYL1 179 aa6.79□□□□□ -1.32
TRA2B-201ENST00000259043 KRTAP23-1A1A580 65 aa6.79□□□□□ -1.32
TRA2B-201ENST00000259043 ZEB2O60315 1214 aa6.79□□□□□ -1.32
TRA2B-201ENST00000259043 LY86O95711 162 aa6.79□□□□□ -1.32
TRA2B-201ENST00000259043 TRIM25Q14258 630 aaKnown RBP6.79□□□□□ -1.32
TRA2B-201ENST00000259043 CCDC178Q5BJE1 867 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms