RNA–Protein interactions for RNA: ENST00000257904.10

CDK4-201, Transcript of cyclin dependent kinase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK4, Length 2,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-201ENST00000257904 ARHGAP44Q17R89 818 aa18.3■□□□□ 0.52
CDK4-201ENST00000257904 CHADLQ6NUI6 762 aa18.3■□□□□ 0.52
CDK4-201ENST00000257904 PIGWQ7Z7B1 504 aa18.3■□□□□ 0.52
CDK4-201ENST00000257904 ZFPM1Q8IX07 1006 aa18.3■□□□□ 0.52
CDK4-201ENST00000257904 PRELID2Q8N945 189 aa18.3■□□□□ 0.52
CDK4-201ENST00000257904 FIZ1Q96SL8 496 aa18.3■□□□□ 0.52
CDK4-201ENST00000257904 AGPAT1Q99943 283 aa18.3■□□□□ 0.52
CDK4-201ENST00000257904 PDGFDQ9GZP0 370 aaPredicted RBP18.3■□□□□ 0.52
CDK4-201ENST00000257904 DBNDD1Q9H9R9 158 aa18.3■□□□□ 0.52
CDK4-201ENST00000257904 AGPAT3Q9NRZ7 376 aa18.3■□□□□ 0.52
CDK4-201ENST00000257904 ADAMTSL1Q8N6G6 1762 aa18.3■□□□□ 0.52
CDK4-201ENST00000257904 MGRN1O60291 552 aa18.3■□□□□ 0.52
CDK4-201ENST00000257904 AGTP01019 485 aa18.3■□□□□ 0.52
CDK4-201ENST00000257904 ZNF76P36508 570 aa18.3■□□□□ 0.52
CDK4-201ENST00000257904 RPL21P46778 160 aaKnown RBP18.3■□□□□ 0.52
CDK4-201ENST00000257904 IFI35P80217 286 aaPredicted RBP18.3■□□□□ 0.52
CDK4-201ENST00000257904 C6orf118Q5T5N4 469 aa18.3■□□□□ 0.52
CDK4-201ENST00000257904 PHLDB3Q6NSJ2 640 aa18.3■□□□□ 0.52
CDK4-201ENST00000257904 APOBEC3HQ6NTF7 200 aaKnown RBP18.3■□□□□ 0.52
CDK4-201ENST00000257904 ZNF720Q7Z2F6 126 aa18.3■□□□□ 0.52
CDK4-201ENST00000257904 CROCCP2Q86T23 111 aa18.3■□□□□ 0.52
CDK4-201ENST00000257904 UBL4BQ8N7F7 174 aa18.3■□□□□ 0.52
CDK4-201ENST00000257904 SEMA4AQ9H3S1 761 aa18.3■□□□□ 0.52
CDK4-201ENST00000257904 TUFT1Q9NNX1 390 aa18.3■□□□□ 0.52
CDK4-201ENST00000257904 PARP2Q9UGN5 583 aa18.3■□□□□ 0.52
CDK4-201ENST00000257904 PCYOX1Q9UHG3 505 aa18.3■□□□□ 0.52
CDK4-201ENST00000257904 TRPC6Q9Y210 931 aa18.3■□□□□ 0.52
CDK4-201ENST00000257904 SMIM23A6NLE4 172 aa18.29■□□□□ 0.52
CDK4-201ENST00000257904 FAM196BA6NMK8 535 aa18.29■□□□□ 0.52
CDK4-201ENST00000257904 FOXN3O00409 490 aaPredicted RBP18.29■□□□□ 0.52
CDK4-201ENST00000257904 PODXLO00592 558 aa18.29■□□□□ 0.52
CDK4-201ENST00000257904 LRRN2O75325 713 aa18.29■□□□□ 0.52
CDK4-201ENST00000257904 SLITRK3O94933 977 aa18.29■□□□□ 0.52
CDK4-201ENST00000257904 CYP3A4P08684 503 aa18.29■□□□□ 0.52
CDK4-201ENST00000257904 TAL1P17542 331 aaPredicted RBP18.29■□□□□ 0.52
CDK4-201ENST00000257904 RFX1P22670 979 aa18.29■□□□□ 0.52
CDK4-201ENST00000257904 CTNNA2P26232 953 aa18.29■□□□□ 0.52
CDK4-201ENST00000257904 HOXA13P31271 388 aaPredicted RBP18.29■□□□□ 0.52
CDK4-201ENST00000257904 TPH2Q8IWU9 490 aa18.29■□□□□ 0.52
CDK4-201ENST00000257904 KRT35Q92764 455 aa18.29■□□□□ 0.52
CDK4-201ENST00000257904 TMEM109Q9BVC6 243 aa18.29■□□□□ 0.52
CDK4-201ENST00000257904 CCDC134Q9H6E4 229 aa18.29■□□□□ 0.52
CDK4-201ENST00000257904 KCNQ5Q9NR82 932 aa18.29■□□□□ 0.52
CDK4-201ENST00000257904 INTS9Q9NV88 658 aaKnown RBP18.29■□□□□ 0.52
CDK4-201ENST00000257904 MTRF1LQ9UGC7 380 aaKnown RBP18.29■□□□□ 0.52
CDK4-201ENST00000257904 PFASO15067 1338 aa18.29■□□□□ 0.52
CDK4-201ENST00000257904 IGLV3-22A0A075B6J6 115 aa18.29■□□□□ 0.52
CDK4-201ENST00000257904 OPLAHO14841 1288 aa18.29■□□□□ 0.52
CDK4-201ENST00000257904 C21orf2O43822 256 aa18.29■□□□□ 0.52
CDK4-201ENST00000257904 CHRNA5P30532 468 aa18.29■□□□□ 0.52
CDK4-201ENST00000257904 MARCKSL1P49006 195 aa18.29■□□□□ 0.52
CDK4-201ENST00000257904 TCEAL1Q15170 157 aa18.29■□□□□ 0.52
CDK4-201ENST00000257904 UBAP2Q5T6F2 1119 aaKnown RBP18.29■□□□□ 0.52
CDK4-201ENST00000257904 TTC27Q6P3X3 843 aa18.29■□□□□ 0.52
CDK4-201ENST00000257904 HHIPL2Q6UWX4 724 aa18.29■□□□□ 0.52
CDK4-201ENST00000257904 SIAH1Q8IUQ4 282 aa18.29■□□□□ 0.52
CDK4-201ENST00000257904 LRRC34Q8IZ02 419 aa18.29■□□□□ 0.52
CDK4-201ENST00000257904 GIMAP7Q8NHV1 300 aa18.29■□□□□ 0.52
CDK4-201ENST00000257904 SLC20A1Q8WUM9 679 aa18.29■□□□□ 0.52
CDK4-201ENST00000257904 DYDC2Q96IM9 177 aa18.29■□□□□ 0.52
CDK4-201ENST00000257904 SCLT1Q96NL6 688 aa18.29■□□□□ 0.52
CDK4-201ENST00000257904 ZSWIM1Q9BR11 485 aa18.29■□□□□ 0.52
CDK4-201ENST00000257904 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP18.29■□□□□ 0.52
CDK4-201ENST00000257904 CTTNBP2NLQ9P2B4 639 aa18.29■□□□□ 0.52
CDK4-201ENST00000257904 SEL1LQ9UBV2 794 aa18.29■□□□□ 0.52
CDK4-201ENST00000257904 SLC12A4Q9UP95 1085 aa18.29■□□□□ 0.52
CDK4-201ENST00000257904 PCDHA3Q9Y5H8 950 aa18.29■□□□□ 0.52
CDK4-201ENST00000257904 GSTA1P08263 222 aa18.28■□□□□ 0.52
CDK4-201ENST00000257904 ZNF131P52739 623 aa18.28■□□□□ 0.52
CDK4-201ENST00000257904 BFSP1Q12934 665 aa18.28■□□□□ 0.52
CDK4-201ENST00000257904 CERKLQ49MI3 558 aaPredicted RBP18.28■□□□□ 0.52
CDK4-201ENST00000257904 BTNL9Q6UXG8 535 aa18.28■□□□□ 0.52
CDK4-201ENST00000257904 STXBP4Q6ZWJ1 553 aa18.28■□□□□ 0.52
CDK4-201ENST00000257904 OTOP1Q7RTM1 612 aa18.28■□□□□ 0.52
CDK4-201ENST00000257904 CEP57Q86XR8 500 aa18.28■□□□□ 0.52
CDK4-201ENST00000257904 FAM178BQ8IXR5 827 aa18.28■□□□□ 0.52
CDK4-201ENST00000257904 ZDHHC14Q8IZN3 488 aa18.28■□□□□ 0.52
CDK4-201ENST00000257904 LMO3Q8TAP4 145 aa18.28■□□□□ 0.52
CDK4-201ENST00000257904 TEKT1Q969V4 418 aa18.28■□□□□ 0.52
CDK4-201ENST00000257904 F5H6K3 240 aa18.27■□□□□ 0.52
CDK4-201ENST00000257904 ZBTB39O15060 712 aa18.27■□□□□ 0.52
CDK4-201ENST00000257904 GGPS1O95749 300 aa18.27■□□□□ 0.52
CDK4-201ENST00000257904 ELF3P78545 371 aaPredicted RBP18.27■□□□□ 0.52
CDK4-201ENST00000257904 ICA1Q05084 483 aa18.27■□□□□ 0.52
CDK4-201ENST00000257904 NBPF9Q3BBW0 867 aa18.27■□□□□ 0.52
CDK4-201ENST00000257904 TNFAIP8L3Q5GJ75 292 aa18.27■□□□□ 0.52
CDK4-201ENST00000257904 SYDE2Q5VT97 1194 aa18.27■□□□□ 0.52
CDK4-201ENST00000257904 SLC30A10Q6XR72 485 aa18.27■□□□□ 0.52
CDK4-201ENST00000257904 EPS8L3Q8TE67 593 aaKnown RBP18.27■□□□□ 0.52
CDK4-201ENST00000257904 PRMT1Q99873 361 aaKnown RBP18.27■□□□□ 0.52
CDK4-201ENST00000257904 SAMD15Q9P1V8 674 aa18.27■□□□□ 0.52
CDK4-201ENST00000257904 SIPA1L1O43166 1804 aa18.27■□□□□ 0.52
CDK4-201ENST00000257904 RIPK2O43353 540 aa18.27■□□□□ 0.51
CDK4-201ENST00000257904 FTLP02792 175 aaPredicted RBP18.27■□□□□ 0.51
CDK4-201ENST00000257904 BCRP11274 1271 aa18.27■□□□□ 0.51
CDK4-201ENST00000257904 ALAS1P13196 640 aa18.27■□□□□ 0.51
CDK4-201ENST00000257904 FGFR4P22455 802 aa18.27■□□□□ 0.51
CDK4-201ENST00000257904 CCDC137Q6PK04 289 aaKnown RBP18.27■□□□□ 0.51
CDK4-201ENST00000257904 PODNQ7Z5L7 613 aa18.27■□□□□ 0.51
CDK4-201ENST00000257904 CNKSR1Q969H4 720 aa18.27■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms