RNA–Protein interactions for RNA: ENST00000256362.4

VRTN-201, Transcript of vertebrae development associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VRTN, Length 3,466 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRTN-201ENST00000256362 DDX3XO00571 662 aaKnown RBP eCLIP12.52□□□□□ -0.41
VRTN-201ENST00000256362 ATMINO43313 823 aaPredicted RBP12.52□□□□□ -0.41
VRTN-201ENST00000256362 TOM1O60784 492 aa12.52□□□□□ -0.41
VRTN-201ENST00000256362 GH1P01241 217 aa12.52□□□□□ -0.41
VRTN-201ENST00000256362 BRAFP15056 766 aa12.52□□□□□ -0.41
VRTN-201ENST00000256362 ARHGAP4P98171 946 aa12.52□□□□□ -0.41
VRTN-201ENST00000256362 GIT2Q14161 759 aa12.52□□□□□ -0.41
VRTN-201ENST00000256362 ZYXQ15942 572 aaKnown RBP12.52□□□□□ -0.41
VRTN-201ENST00000256362 NBPF20Q3BBV1 942 aa12.52□□□□□ -0.41
VRTN-201ENST00000256362 ERMARDQ5T6L9 678 aa12.52□□□□□ -0.41
VRTN-201ENST00000256362 AGBL2Q5U5Z8 902 aa12.52□□□□□ -0.41
VRTN-201ENST00000256362 APBB1IPQ7Z5R6 666 aaPredicted RBP12.52□□□□□ -0.41
VRTN-201ENST00000256362 C3orf20Q8ND61 904 aa12.52□□□□□ -0.41
VRTN-201ENST00000256362 CYTH2Q99418 400 aa12.52□□□□□ -0.41
VRTN-201ENST00000256362 ACP6Q9NPH0 428 aa12.52□□□□□ -0.41
VRTN-201ENST00000256362 PCDHA2Q9Y5H9 948 aa12.52□□□□□ -0.41
VRTN-201ENST00000256362 CCDC88AQ3V6T2 1871 aa12.52□□□□□ -0.41
VRTN-201ENST00000256362 IRS2Q9Y4H2 1338 aa12.52□□□□□ -0.41
VRTN-201ENST00000256362 DPPA5A6NC42 116 aa12.52□□□□□ -0.41
VRTN-201ENST00000256362 FAM86B1E9PN63 330 aa12.52□□□□□ -0.41
VRTN-201ENST00000256362 PPIP5K2O43314 1243 aa12.52□□□□□ -0.41
VRTN-201ENST00000256362 DNAJC8O75937 253 aaPredicted RBP12.52□□□□□ -0.41
VRTN-201ENST00000256362 FAM86B2P0C5J1 330 aa12.52□□□□□ -0.41
VRTN-201ENST00000256362 EEF2P13639 858 aaKnown RBP12.52□□□□□ -0.41
VRTN-201ENST00000256362 ECHS1P30084 290 aa12.52□□□□□ -0.41
VRTN-201ENST00000256362 SLC8A3P57103 927 aa12.52□□□□□ -0.41
VRTN-201ENST00000256362 COPS2P61201 443 aa12.52□□□□□ -0.41
VRTN-201ENST00000256362 NCALDP61601 193 aa12.52□□□□□ -0.41
VRTN-201ENST00000256362 TMED2Q15363 201 aa12.52□□□□□ -0.41
VRTN-201ENST00000256362 SPATA21Q7Z572 469 aa12.52□□□□□ -0.41
VRTN-201ENST00000256362 RPUSD2Q8IZ73 545 aaKnown RBP12.52□□□□□ -0.41
VRTN-201ENST00000256362 SUPT20HQ8NEM7 779 aa12.52□□□□□ -0.41
VRTN-201ENST00000256362 TBC1D16Q8TBP0 767 aa12.52□□□□□ -0.41
VRTN-201ENST00000256362 DYDC2Q96IM9 177 aa12.52□□□□□ -0.41
VRTN-201ENST00000256362 PCIF1Q9H4Z3 704 aa12.52□□□□□ -0.41
VRTN-201ENST00000256362 ETAA1Q9NY74 926 aa12.52□□□□□ -0.41
VRTN-201ENST00000256362 LAMB1P07942 1786 aa12.51□□□□□ -0.41
VRTN-201ENST00000256362 BAG2O95816 211 aa12.51□□□□□ -0.41
VRTN-201ENST00000256362 UBTFL6P0CB48 400 aaPredicted RBP12.51□□□□□ -0.41
VRTN-201ENST00000256362 USP4Q13107 963 aa12.51□□□□□ -0.41
VRTN-201ENST00000256362 SEPT2Q15019 361 aa12.51□□□□□ -0.41
VRTN-201ENST00000256362 SCYL3Q8IZE3 742 aa12.51□□□□□ -0.41
VRTN-201ENST00000256362 PWWP2AQ96N64 755 aa12.51□□□□□ -0.41
VRTN-201ENST00000256362 RPS6KC1Q96S38 1066 aa12.51□□□□□ -0.41
VRTN-201ENST00000256362 POP1Q99575 1024 aaKnown RBP12.51□□□□□ -0.41
VRTN-201ENST00000256362 PITPNM3Q9BZ71 974 aa12.51□□□□□ -0.41
VRTN-201ENST00000256362 BATF3Q9NR55 127 aa12.51□□□□□ -0.41
VRTN-201ENST00000256362 AIPL1Q9NZN9 384 aa12.51□□□□□ -0.41
VRTN-201ENST00000256362 ZBTB21Q9ULJ3 1066 aa12.51□□□□□ -0.41
VRTN-201ENST00000256362 ZMYND8Q9ULU4 1186 aaPredicted RBP12.51□□□□□ -0.41
VRTN-201ENST00000256362 PCNTO95613 3336 aa12.51□□□□□ -0.41
VRTN-201ENST00000256362 KDM3AQ9Y4C1 1321 aa12.51□□□□□ -0.41
VRTN-201ENST00000256362 TISP43B9A030 160 aa12.51□□□□□ -0.41
VRTN-201ENST00000256362 IRF6O14896 467 aa12.51□□□□□ -0.41
VRTN-201ENST00000256362 THAP12O43422 761 aa12.51□□□□□ -0.41
VRTN-201ENST00000256362 GNA14O95837 355 aa12.51□□□□□ -0.41
VRTN-201ENST00000256362 KRT15P19012 456 aa12.51□□□□□ -0.41
VRTN-201ENST00000256362 SLC12A3P55017 1021 aa12.51□□□□□ -0.41
VRTN-201ENST00000256362 RCN2Q14257 317 aa12.51□□□□□ -0.41
VRTN-201ENST00000256362 CERS5Q8N5B7 392 aa12.51□□□□□ -0.41
VRTN-201ENST00000256362 SLC35G2Q8TBE7 412 aa12.51□□□□□ -0.41
VRTN-201ENST00000256362 ARHGEF26Q96DR7 871 aa12.51□□□□□ -0.41
VRTN-201ENST00000256362 DDX50Q9BQ39 737 aaKnown RBP12.51□□□□□ -0.41
VRTN-201ENST00000256362 ERVK-5Q9HDB9 667 aa12.51□□□□□ -0.41
VRTN-201ENST00000256362 EML1O00423 815 aa12.5□□□□□ -0.41
VRTN-201ENST00000256362 LUC7L3O95232 432 aaKnown RBP12.5□□□□□ -0.41
VRTN-201ENST00000256362 CFBP00751 764 aa12.5□□□□□ -0.41
VRTN-201ENST00000256362 ZCCHC18P0CG32 403 aa12.5□□□□□ -0.41
VRTN-201ENST00000256362 ATP4AP20648 1035 aa12.5□□□□□ -0.41
VRTN-201ENST00000256362 CCND1P24385 295 aa12.5□□□□□ -0.41
VRTN-201ENST00000256362 SHMT1P34896 483 aa12.5□□□□□ -0.41
VRTN-201ENST00000256362 PAPOLAP51003 745 aaKnown RBP12.5□□□□□ -0.41
VRTN-201ENST00000256362 DNAJC3Q13217 504 aa12.5□□□□□ -0.41
VRTN-201ENST00000256362 RBM26Q5T8P6 1007 aaKnown RBP12.5□□□□□ -0.41
VRTN-201ENST00000256362 RNF220Q5VTB9 566 aa12.5□□□□□ -0.41
VRTN-201ENST00000256362 SLFN13Q68D06 897 aa12.5□□□□□ -0.41
VRTN-201ENST00000256362 CPNE8Q86YQ8 564 aa12.5□□□□□ -0.41
VRTN-201ENST00000256362 C1orf54Q8WWF1 131 aa12.5□□□□□ -0.41
VRTN-201ENST00000256362 GBP5Q96PP8 586 aa12.5□□□□□ -0.41
VRTN-201ENST00000256362 DBNDD1Q9H9R9 158 aa12.5□□□□□ -0.41
VRTN-201ENST00000256362 CFAP73A6NFT4 308 aa12.5□□□□□ -0.41
VRTN-201ENST00000256362 FAM13AO94988 1023 aa12.5□□□□□ -0.41
VRTN-201ENST00000256362 STAT1P42224 750 aa12.5□□□□□ -0.41
VRTN-201ENST00000256362 RWDD2BP57060 319 aa12.5□□□□□ -0.41
VRTN-201ENST00000256362 DRAP1Q14919 205 aaPredicted RBP12.5□□□□□ -0.41
VRTN-201ENST00000256362 COBLL1Q53SF7 1204 aa12.5□□□□□ -0.41
VRTN-201ENST00000256362 MIS18BP1Q6P0N0 1132 aa12.5□□□□□ -0.41
VRTN-201ENST00000256362 JAMLQ86YT9 394 aa12.5□□□□□ -0.41
VRTN-201ENST00000256362 CD302Q8IX05 232 aa12.5□□□□□ -0.41
VRTN-201ENST00000256362 ENTPD5O75356 428 aa12.5□□□□□ -0.41
VRTN-201ENST00000256362 MARCKSL1P49006 195 aa12.5□□□□□ -0.41
VRTN-201ENST00000256362 SEMA3FQ13275 785 aa12.5□□□□□ -0.41
VRTN-201ENST00000256362 FAM186BQ8IYM0 893 aa12.5□□□□□ -0.41
VRTN-201ENST00000256362 LRRC57Q8N9N7 239 aa12.5□□□□□ -0.41
VRTN-201ENST00000256362 LNX1Q8TBB1 728 aaPredicted RBP12.5□□□□□ -0.41
VRTN-201ENST00000256362 CCHCR1Q8TD31 782 aa12.5□□□□□ -0.41
VRTN-201ENST00000256362 BTBD6Q96KE9 485 aa12.5□□□□□ -0.41
VRTN-201ENST00000256362 EDEM3Q9BZQ6 932 aa12.5□□□□□ -0.41
VRTN-201ENST00000256362 THAP2Q9H0W7 228 aa12.5□□□□□ -0.41
VRTN-201ENST00000256362 STMN4Q9H169 189 aaPredicted RBP12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms