RNA–Protein interactions for RNA: ENST00000254231.4

LIN28A-201, Transcript of lin-28 homolog A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN28A, Length 3,458 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN28A-201ENST00000254231 LAMTOR4Q0VGL1 99 aa12.66□□□□□ -0.38
LIN28A-201ENST00000254231 MAPK7Q13164 816 aa12.66□□□□□ -0.38
LIN28A-201ENST00000254231 LRRC55Q6ZSA7 311 aa12.66□□□□□ -0.38
LIN28A-201ENST00000254231 SMAP1Q8IYB5 467 aaPredicted RBP12.66□□□□□ -0.38
LIN28A-201ENST00000254231 CAGE1Q8TC20 777 aa12.66□□□□□ -0.38
LIN28A-201ENST00000254231 SPIRE2Q8WWL2 714 aa12.66□□□□□ -0.38
LIN28A-201ENST00000254231 GDAP1L1Q96MZ0 367 aa12.66□□□□□ -0.38
LIN28A-201ENST00000254231 MAP7D2Q96T17 732 aa12.66□□□□□ -0.38
LIN28A-201ENST00000254231 MINDY3Q9H8M7 445 aa12.66□□□□□ -0.38
LIN28A-201ENST00000254231 MANSC4A6NHS7 340 aaPredicted RBP12.66□□□□□ -0.38
LIN28A-201ENST00000254231 CD19P15391 556 aa12.66□□□□□ -0.38
LIN28A-201ENST00000254231 GAP43P17677 238 aa12.66□□□□□ -0.38
LIN28A-201ENST00000254231 MYL7Q01449 175 aa12.66□□□□□ -0.38
LIN28A-201ENST00000254231 PSMD2Q13200 908 aa12.66□□□□□ -0.38
LIN28A-201ENST00000254231 MAPK6Q16659 721 aa12.66□□□□□ -0.38
LIN28A-201ENST00000254231 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.66□□□□□ -0.38
LIN28A-201ENST00000254231 TMEM192Q8IY95 271 aa12.66□□□□□ -0.38
LIN28A-201ENST00000254231 PPP1R13BQ96KQ4 1090 aa12.66□□□□□ -0.38
LIN28A-201ENST00000254231 RNF186Q9NXI6 227 aa12.66□□□□□ -0.38
LIN28A-201ENST00000254231 ERAP1Q9NZ08 941 aa12.66□□□□□ -0.38
LIN28A-201ENST00000254231 HDAC6Q9UBN7 1215 aa12.66□□□□□ -0.38
LIN28A-201ENST00000254231 CCDC175P0C221 793 aa12.65□□□□□ -0.38
LIN28A-201ENST00000254231 ORC2Q13416 577 aaPredicted RBP12.65□□□□□ -0.38
LIN28A-201ENST00000254231 FAM110CQ1W6H9 321 aa12.65□□□□□ -0.38
LIN28A-201ENST00000254231 AGO2Q9UKV8 859 aaKnown RBP12.65□□□□□ -0.38
LIN28A-201ENST00000254231 EPN1Q9Y6I3 576 aaPredicted RBP12.65□□□□□ -0.38
LIN28A-201ENST00000254231 RIOK3O14730 519 aaKnown RBP12.65□□□□□ -0.38
LIN28A-201ENST00000254231 KIF3CO14782 793 aa12.65□□□□□ -0.38
LIN28A-201ENST00000254231 MYL1P05976 194 aa12.65□□□□□ -0.38
LIN28A-201ENST00000254231 CYP2C9P11712 490 aa12.65□□□□□ -0.38
LIN28A-201ENST00000254231 PRKAR2AP13861 404 aaKnown RBP12.65□□□□□ -0.38
LIN28A-201ENST00000254231 CTGFP29279 349 aa12.65□□□□□ -0.38
LIN28A-201ENST00000254231 MXI1P50539 228 aa12.65□□□□□ -0.38
LIN28A-201ENST00000254231 VAMP7P51809 220 aa12.65□□□□□ -0.38
LIN28A-201ENST00000254231 PPP3CAQ08209 521 aa12.65□□□□□ -0.38
LIN28A-201ENST00000254231 MIIPQ5JXC2 388 aa12.65□□□□□ -0.38
LIN28A-201ENST00000254231 EEF1DP3Q658K8 133 aa12.65□□□□□ -0.38
LIN28A-201ENST00000254231 ZBTB8OSQ8IWT0 167 aa12.65□□□□□ -0.38
LIN28A-201ENST00000254231 TAB3Q8N5C8 712 aaPredicted RBP12.65□□□□□ -0.38
LIN28A-201ENST00000254231 MNS1Q8NEH6 495 aa12.65□□□□□ -0.38
LIN28A-201ENST00000254231 KCTD10Q9H3F6 313 aa12.65□□□□□ -0.38
LIN28A-201ENST00000254231 SMARCAD1Q9H4L7 1026 aa12.65□□□□□ -0.38
LIN28A-201ENST00000254231 NHEJ1Q9H9Q4 299 aaPredicted RBP12.65□□□□□ -0.38
LIN28A-201ENST00000254231 CDHR5Q9HBB8 845 aa12.65□□□□□ -0.38
LIN28A-201ENST00000254231 TREHO43280 583 aa12.65□□□□□ -0.38
LIN28A-201ENST00000254231 ATMINO43313 823 aaPredicted RBP12.65□□□□□ -0.38
LIN28A-201ENST00000254231 ADRB2P07550 413 aa12.65□□□□□ -0.38
LIN28A-201ENST00000254231 WEE2P0C1S8 567 aa12.65□□□□□ -0.38
LIN28A-201ENST00000254231 CAPSQ13938 189 aa12.65□□□□□ -0.38
LIN28A-201ENST00000254231 TEX35Q5T0J7 233 aa12.65□□□□□ -0.38
LIN28A-201ENST00000254231 GBP6Q6ZN66 633 aa12.65□□□□□ -0.38
LIN28A-201ENST00000254231 MCPH1Q8NEM0 835 aa12.65□□□□□ -0.38
LIN28A-201ENST00000254231 FGD4Q96M96 766 aa12.65□□□□□ -0.38
LIN28A-201ENST00000254231 WDR24Q96S15 920 aa12.65□□□□□ -0.38
LIN28A-201ENST00000254231 ABHD16BQ9H3Z7 469 aa12.65□□□□□ -0.38
LIN28A-201ENST00000254231 SMARCAL1Q9NZC9 954 aa12.65□□□□□ -0.38
LIN28A-201ENST00000254231 LIMA1Q9UHB6 759 aaKnown RBP12.65□□□□□ -0.38
LIN28A-201ENST00000254231 DNAJC12Q9UKB3 198 aa12.65□□□□□ -0.38
LIN28A-201ENST00000254231 PRKCBP05771 671 aa12.64□□□□□ -0.39
LIN28A-201ENST00000254231 RARBP10826 455 aa12.64□□□□□ -0.39
LIN28A-201ENST00000254231 BCRP11274 1271 aa12.64□□□□□ -0.39
LIN28A-201ENST00000254231 TMOD1P28289 359 aa12.64□□□□□ -0.39
LIN28A-201ENST00000254231 MAPK4P31152 587 aa12.64□□□□□ -0.39
LIN28A-201ENST00000254231 MAGEA1P43355 309 aa12.64□□□□□ -0.39
LIN28A-201ENST00000254231 CETN1Q12798 172 aa12.64□□□□□ -0.39
LIN28A-201ENST00000254231 MAP2K5Q13163 448 aa12.64□□□□□ -0.39
LIN28A-201ENST00000254231 SFMBT2Q5VUG0 894 aa12.64□□□□□ -0.39
LIN28A-201ENST00000254231 KIAA0319LQ8IZA0 1049 aa12.64□□□□□ -0.39
LIN28A-201ENST00000254231 SLC30A5Q8TAD4 765 aa12.64□□□□□ -0.39
LIN28A-201ENST00000254231 TAS1R2Q8TE23 839 aa12.64□□□□□ -0.39
LIN28A-201ENST00000254231 PRDM5Q9NQX1 630 aaPredicted RBP12.64□□□□□ -0.39
LIN28A-201ENST00000254231 ST7Q9NRC1 585 aa12.64□□□□□ -0.39
LIN28A-201ENST00000254231 RBAKQ9NYW8 714 aaPredicted RBP12.64□□□□□ -0.39
LIN28A-201ENST00000254231 RPTORQ8N122 1335 aa12.64□□□□□ -0.39
LIN28A-201ENST00000254231 TOMM70O94826 608 aa12.64□□□□□ -0.39
LIN28A-201ENST00000254231 BRDTQ58F21 947 aaPredicted RBP12.64□□□□□ -0.39
LIN28A-201ENST00000254231 APTXQ7Z2E3 356 aaKnown RBP12.64□□□□□ -0.39
LIN28A-201ENST00000254231 TMEM161BQ8NDZ6 487 aa12.64□□□□□ -0.39
LIN28A-201ENST00000254231 TATDN2Q93075 761 aa12.64□□□□□ -0.39
LIN28A-201ENST00000254231 PIN4Q9Y237 131 aaKnown RBP12.64□□□□□ -0.39
LIN28A-201ENST00000254231 MAFGO15525 162 aa12.64□□□□□ -0.39
LIN28A-201ENST00000254231 DKC1O60832 514 aaKnown RBP eCLIP12.64□□□□□ -0.39
LIN28A-201ENST00000254231 CCND3P30281 292 aaPredicted RBP12.64□□□□□ -0.39
LIN28A-201ENST00000254231 SP3Q02447 781 aa12.64□□□□□ -0.39
LIN28A-201ENST00000254231 TRPC3Q13507 836 aa12.64□□□□□ -0.39
LIN28A-201ENST00000254231 TWF2Q6IBS0 349 aaKnown RBP12.64□□□□□ -0.39
LIN28A-201ENST00000254231 PACSIN1Q9BY11 444 aa12.64□□□□□ -0.39
LIN28A-201ENST00000254231 IFIH1Q9BYX4 1025 aaKnown RBP12.64□□□□□ -0.39
LIN28A-201ENST00000254231 HAUS4Q9H6D7 363 aa12.64□□□□□ -0.39
LIN28A-201ENST00000254231 PNMA2Q9UL42 364 aa12.64□□□□□ -0.39
LIN28A-201ENST00000254231 ZNF215Q9UL58 517 aaPredicted RBP12.64□□□□□ -0.39
LIN28A-201ENST00000254231 KIF5CO60282 957 aa12.63□□□□□ -0.39
LIN28A-201ENST00000254231 ZBTB48P10074 688 aaPredicted RBP12.63□□□□□ -0.39
LIN28A-201ENST00000254231 CXCL8P10145 99 aa12.63□□□□□ -0.39
LIN28A-201ENST00000254231 PIK3CAP42336 1068 aa12.63□□□□□ -0.39
LIN28A-201ENST00000254231 CAP1Q01518 475 aa12.63□□□□□ -0.39
LIN28A-201ENST00000254231 DGKDQ16760 1214 aa12.63□□□□□ -0.39
LIN28A-201ENST00000254231 CCDC102AQ96A19 550 aa12.63□□□□□ -0.39
LIN28A-201ENST00000254231 PPP1R12CQ9BZL4 782 aa12.63□□□□□ -0.39
LIN28A-201ENST00000254231 FRMPD4Q14CM0 1322 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms