RNA–Protein interactions for RNA: ENST00000253363.10

RBM39-201, Transcript of RNA binding motif protein 39, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene RBM39, Length 2,488 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-201ENST00000253363 LRRCC1Q9C099 1032 aa4.2□□□□□ -1.74
RBM39-201ENST00000253363 SIL1Q9H173 461 aa4.2□□□□□ -1.74
RBM39-201ENST00000253363 CXorf56Q9H5V9 222 aa4.2□□□□□ -1.74
RBM39-201ENST00000253363 TMOD4Q9NZQ9 345 aa4.2□□□□□ -1.74
RBM39-201ENST00000253363 ARPP21Q9UBL0 812 aaPredicted RBP4.2□□□□□ -1.74
RBM39-201ENST00000253363 ANAPC4Q9UJX5 808 aa4.2□□□□□ -1.74
RBM39-201ENST00000253363 PCDHA9Q9Y5H5 950 aa4.2□□□□□ -1.74
RBM39-201ENST00000253363 MYH2Q9UKX2 1941 aa4.2□□□□□ -1.74
RBM39-201ENST00000253363 A0A0A0MRY4 1105 aa4.2□□□□□ -1.74
RBM39-201ENST00000253363 ZNF891A8MT65 544 aaPredicted RBP4.2□□□□□ -1.74
RBM39-201ENST00000253363 TCP10L2B9ZVM9 353 aa4.2□□□□□ -1.74
RBM39-201ENST00000253363 F8W031 263 aaPredicted RBP4.2□□□□□ -1.74
RBM39-201ENST00000253363 HIP1O00291 1037 aa4.2□□□□□ -1.74
RBM39-201ENST00000253363 NOP56O00567 594 aaKnown RBP4.2□□□□□ -1.74
RBM39-201ENST00000253363 SLC3A2P08195 630 aaKnown RBP4.2□□□□□ -1.74
RBM39-201ENST00000253363 KCNJ6P48051 423 aa4.2□□□□□ -1.74
RBM39-201ENST00000253363 GFRA1P56159 465 aa4.2□□□□□ -1.74
RBM39-201ENST00000253363 PPP2R5AQ15172 486 aa4.2□□□□□ -1.74
RBM39-201ENST00000253363 FAM110CQ1W6H9 321 aa4.2□□□□□ -1.74
RBM39-201ENST00000253363 SLC4A8Q2Y0W8 1093 aa4.2□□□□□ -1.74
RBM39-201ENST00000253363 CCDC178Q5BJE1 867 aa4.2□□□□□ -1.74
RBM39-201ENST00000253363 WWC2Q6AWC2 1192 aa4.2□□□□□ -1.74
RBM39-201ENST00000253363 RCSD1Q6JBY9 416 aa4.2□□□□□ -1.74
RBM39-201ENST00000253363 LETMD1Q6P1Q0 360 aa4.2□□□□□ -1.74
RBM39-201ENST00000253363 PPP1R3FQ6ZSY5 799 aaPredicted RBP4.2□□□□□ -1.74
RBM39-201ENST00000253363 TMC3Q7Z5M5 1100 aa4.2□□□□□ -1.74
RBM39-201ENST00000253363 C7orf61Q8IZ16 206 aa4.2□□□□□ -1.74
RBM39-201ENST00000253363 MYRIPQ8NFW9 859 aa4.2□□□□□ -1.74
RBM39-201ENST00000253363 ERP27Q96DN0 273 aa4.2□□□□□ -1.74
RBM39-201ENST00000253363 IRX2Q9BZI1 471 aaPredicted RBP4.2□□□□□ -1.74
RBM39-201ENST00000253363 RNF208Q9H0X6 261 aa4.2□□□□□ -1.74
RBM39-201ENST00000253363 ATXN3LQ9H3M9 355 aa4.2□□□□□ -1.74
RBM39-201ENST00000253363 CABP5Q9NP86 173 aa4.2□□□□□ -1.74
RBM39-201ENST00000253363 CRTAC1Q9NQ79 661 aa4.2□□□□□ -1.74
RBM39-201ENST00000253363 INTS7Q9NVH2 962 aaKnown RBP4.2□□□□□ -1.74
RBM39-201ENST00000253363 MORF4L1Q9UBU8 362 aa4.2□□□□□ -1.74
RBM39-201ENST00000253363 ATAD5Q96QE3 1844 aa4.2□□□□□ -1.74
RBM39-201ENST00000253363 FLT1P17948 1338 aa4.19□□□□□ -1.74
RBM39-201ENST00000253363 ALG1L2C9J202 215 aa4.19□□□□□ -1.74
RBM39-201ENST00000253363 AKAP10O43572 662 aa4.19□□□□□ -1.74
RBM39-201ENST00000253363 TSPAN6O43657 245 aa4.19□□□□□ -1.74
RBM39-201ENST00000253363 CAND2O75155 1236 aa4.19□□□□□ -1.74
RBM39-201ENST00000253363 BCAR3O75815 825 aa4.19□□□□□ -1.74
RBM39-201ENST00000253363 VSIG8P0DPA2 414 aa4.19□□□□□ -1.74
RBM39-201ENST00000253363 RBP3P10745 1247 aa4.19□□□□□ -1.74
RBM39-201ENST00000253363 PRDX5P30044 214 aa4.19□□□□□ -1.74
RBM39-201ENST00000253363 MAPK4P31152 587 aa4.19□□□□□ -1.74
RBM39-201ENST00000253363 HOXA7P31268 230 aaPredicted RBP4.19□□□□□ -1.74
RBM39-201ENST00000253363 ECI1P42126 302 aa4.19□□□□□ -1.74
RBM39-201ENST00000253363 MCAMP43121 646 aa4.19□□□□□ -1.74
RBM39-201ENST00000253363 PREPP48147 710 aa4.19□□□□□ -1.74
RBM39-201ENST00000253363 C14orf80Q86SX3 495 aa4.19□□□□□ -1.74
RBM39-201ENST00000253363 AACSQ86V21 672 aa4.19□□□□□ -1.74
RBM39-201ENST00000253363 PPM1KQ8N3J5 372 aa4.19□□□□□ -1.74
RBM39-201ENST00000253363 ARHGEF39Q8N4T4 335 aa4.19□□□□□ -1.74
RBM39-201ENST00000253363 CRACR2BQ8N4Y2 399 aaPredicted RBP4.19□□□□□ -1.74
RBM39-201ENST00000253363 SHCBP1Q8NEM2 672 aa4.19□□□□□ -1.74
RBM39-201ENST00000253363 WHAMMQ8TF30 809 aa4.19□□□□□ -1.74
RBM39-201ENST00000253363 YIPF4Q9BSR8 244 aa4.19□□□□□ -1.74
RBM39-201ENST00000253363 MCMBPQ9BTE3 642 aa4.19□□□□□ -1.74
RBM39-201ENST00000253363 FOXQ1Q9C009 403 aa4.19□□□□□ -1.74
RBM39-201ENST00000253363 PRDM14Q9GZV8 571 aa4.19□□□□□ -1.74
RBM39-201ENST00000253363 GBP3Q9H0R5 595 aa4.19□□□□□ -1.74
RBM39-201ENST00000253363 RETREG1Q9H6L5 497 aa4.19□□□□□ -1.74
RBM39-201ENST00000253363 SUGCTQ9HAC7 445 aa4.19□□□□□ -1.74
RBM39-201ENST00000253363 XPO5Q9HAV4 1204 aaKnown RBP eCLIP4.19□□□□□ -1.74
RBM39-201ENST00000253363 GPRC5CQ9NQ84 441 aa4.19□□□□□ -1.74
RBM39-201ENST00000253363 PRDM6Q9NQX0 595 aa4.19□□□□□ -1.74
RBM39-201ENST00000253363 GFOD1Q9NXC2 390 aa4.19□□□□□ -1.74
RBM39-201ENST00000253363 SLC5A4Q9NY91 659 aa4.19□□□□□ -1.74
RBM39-201ENST00000253363 FBXL21Q9UKT6 434 aa4.19□□□□□ -1.74
RBM39-201ENST00000253363 ASTN2O75129 1339 aaPredicted RBP4.19□□□□□ -1.74
RBM39-201ENST00000253363 PNMA6EA0A0J9YXQ4 647 aa4.19□□□□□ -1.74
RBM39-201ENST00000253363 TCRBV16S1A1N1A0A5B0 115 aa4.19□□□□□ -1.74
RBM39-201ENST00000253363 GPR39O43194 453 aa4.19□□□□□ -1.74
RBM39-201ENST00000253363 SNRPB2P08579 225 aaKnown RBP4.19□□□□□ -1.74
RBM39-201ENST00000253363 ADORA1P30542 326 aa4.19□□□□□ -1.74
RBM39-201ENST00000253363 CAP2P40123 477 aa4.19□□□□□ -1.74
RBM39-201ENST00000253363 RRP1P56182 461 aaKnown RBP4.19□□□□□ -1.74
RBM39-201ENST00000253363 SNRPNP63162 240 aaKnown RBP4.19□□□□□ -1.74
RBM39-201ENST00000253363 ZBED6P86452 979 aa4.19□□□□□ -1.74
RBM39-201ENST00000253363 CDK5R2Q13319 367 aa4.19□□□□□ -1.74
RBM39-201ENST00000253363 GRIK4Q16099 956 aa4.19□□□□□ -1.74
RBM39-201ENST00000253363 SBK1Q52WX2 424 aa4.19□□□□□ -1.74
RBM39-201ENST00000253363 HP1BP3Q5SSJ5 553 aaPredicted RBP4.19□□□□□ -1.74
RBM39-201ENST00000253363 LCE2CQ5TA81 110 aa4.19□□□□□ -1.74
RBM39-201ENST00000253363 PIK3R6Q5UE93 754 aa4.19□□□□□ -1.74
RBM39-201ENST00000253363 USP53Q70EK8 1073 aa4.19□□□□□ -1.74
RBM39-201ENST00000253363 TTC30AQ86WT1 665 aa4.19□□□□□ -1.74
RBM39-201ENST00000253363 NXPE1Q8N323 547 aa4.19□□□□□ -1.74
RBM39-201ENST00000253363 SNRNP27Q8WVK2 155 aaKnown RBP4.19□□□□□ -1.74
RBM39-201ENST00000253363 BRI3BPQ8WY22 251 aa4.19□□□□□ -1.74
RBM39-201ENST00000253363 CENPOQ9BU64 300 aa4.19□□□□□ -1.74
RBM39-201ENST00000253363 TMEM39BQ9GZU3 492 aa4.19□□□□□ -1.74
RBM39-201ENST00000253363 SEMA6CQ9H3T2 930 aa4.19□□□□□ -1.74
RBM39-201ENST00000253363 CYP4F12Q9HCS2 524 aa4.19□□□□□ -1.74
RBM39-201ENST00000253363 VTA1Q9NP79 307 aa4.19□□□□□ -1.74
RBM39-201ENST00000253363 ECHDC1Q9NTX5 307 aa4.19□□□□□ -1.74
RBM39-201ENST00000253363 CLIC5Q9NZA1 410 aa4.19□□□□□ -1.74
RBM39-201ENST00000253363 ABCF2Q9UG63 623 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms