RNA–Protein interactions for RNA: ENST00000249014.4

CDC42EP1-201, Transcript of CDC42 effector protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CDC42EP1, Length 2,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1-201ENST00000249014 NEUROG2Q9H2A3 272 aa21.14■□□□□ 0.97
CDC42EP1-201ENST00000249014 KIAA1217Q5T5P2 1943 aa21.14■□□□□ 0.97
CDC42EP1-201ENST00000249014 ANKRD63C9JTQ0 380 aa21.13■□□□□ 0.97
CDC42EP1-201ENST00000249014 VWA5AO00534 786 aa21.13■□□□□ 0.97
CDC42EP1-201ENST00000249014 JAK3P52333 1124 aa21.13■□□□□ 0.97
CDC42EP1-201ENST00000249014 ZNF280AP59817 542 aaPredicted RBP21.13■□□□□ 0.97
CDC42EP1-201ENST00000249014 TNFAIP1Q13829 316 aa21.13■□□□□ 0.97
CDC42EP1-201ENST00000249014 ARHGEF16Q5VV41 709 aa21.13■□□□□ 0.97
CDC42EP1-201ENST00000249014 ANO5Q75V66 913 aa21.13■□□□□ 0.97
CDC42EP1-201ENST00000249014 SAMD3Q8N6K7 520 aa21.13■□□□□ 0.97
CDC42EP1-201ENST00000249014 EIF1ADQ8N9N8 165 aaKnown RBP21.13■□□□□ 0.97
CDC42EP1-201ENST00000249014 ATG4CQ96DT6 458 aa21.13■□□□□ 0.97
CDC42EP1-201ENST00000249014 TIPINQ9BVW5 301 aa21.13■□□□□ 0.97
CDC42EP1-201ENST00000249014 NR2E1Q9Y466 385 aa21.13■□□□□ 0.97
CDC42EP1-201ENST00000249014 MAPK13O15264 365 aa21.13■□□□□ 0.97
CDC42EP1-201ENST00000249014 FGGP02679 453 aa21.13■□□□□ 0.97
CDC42EP1-201ENST00000249014 HSPA9P38646 679 aaKnown RBP21.13■□□□□ 0.97
CDC42EP1-201ENST00000249014 CUL1Q13616 776 aa21.13■□□□□ 0.97
CDC42EP1-201ENST00000249014 DNAJC21Q5F1R6 531 aaKnown RBP21.13■□□□□ 0.97
CDC42EP1-201ENST00000249014 KCTD16Q68DU8 428 aa21.13■□□□□ 0.97
CDC42EP1-201ENST00000249014 CBWD2Q8IUF1 395 aa21.13■□□□□ 0.97
CDC42EP1-201ENST00000249014 SH2D3CQ8N5H7 860 aa21.13■□□□□ 0.97
CDC42EP1-201ENST00000249014 JDP2Q8WYK2 163 aa21.13■□□□□ 0.97
CDC42EP1-201ENST00000249014 DOCK5Q9H7D0 1870 aa21.13■□□□□ 0.97
CDC42EP1-201ENST00000249014 TTC7AQ9ULT0 858 aaPredicted RBP21.13■□□□□ 0.97
CDC42EP1-201ENST00000249014 CTDP1Q9Y5B0 961 aaPredicted RBP21.13■□□□□ 0.97
CDC42EP1-201ENST00000249014 TULP2O00295 520 aa21.12■□□□□ 0.97
CDC42EP1-201ENST00000249014 ZBED4O75132 1171 aa21.12■□□□□ 0.97
CDC42EP1-201ENST00000249014 SFNP31947 248 aa21.12■□□□□ 0.97
CDC42EP1-201ENST00000249014 MXI1P50539 228 aa21.12■□□□□ 0.97
CDC42EP1-201ENST00000249014 IRAK1P51617 712 aa21.12■□□□□ 0.97
CDC42EP1-201ENST00000249014 KRT76Q01546 638 aa21.12■□□□□ 0.97
CDC42EP1-201ENST00000249014 BAATQ14032 418 aaPredicted RBP21.12■□□□□ 0.97
CDC42EP1-201ENST00000249014 RPUSD2Q8IZ73 545 aaKnown RBP21.12■□□□□ 0.97
CDC42EP1-201ENST00000249014 TMEM161BQ8NDZ6 487 aa21.12■□□□□ 0.97
CDC42EP1-201ENST00000249014 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP21.12■□□□□ 0.972e-6■■■■■ 29
CDC42EP1-201ENST00000249014 CELF4Q9BZC1 486 aaKnown RBP21.12■□□□□ 0.97
CDC42EP1-201ENST00000249014 PIM2Q9P1W9 311 aa21.12■□□□□ 0.97
CDC42EP1-201ENST00000249014 LCMT1Q9UIC8 334 aa21.12■□□□□ 0.97
CDC42EP1-201ENST00000249014 TBX20Q9UMR3 447 aa21.12■□□□□ 0.97
CDC42EP1-201ENST00000249014 RLFQ13129 1914 aa21.12■□□□□ 0.97
CDC42EP1-201ENST00000249014 FTLP02792 175 aaPredicted RBP21.12■□□□□ 0.97
CDC42EP1-201ENST00000249014 ZNF746Q6NUN9 644 aaPredicted RBP21.12■□□□□ 0.97
CDC42EP1-201ENST00000249014 SAMD7Q7Z3H4 446 aa21.12■□□□□ 0.97
CDC42EP1-201ENST00000249014 CD302Q8IX05 232 aa21.12■□□□□ 0.97
CDC42EP1-201ENST00000249014 SAAL1Q96ER3 474 aa21.12■□□□□ 0.97
CDC42EP1-201ENST00000249014 TAOK3Q9H2K8 898 aa21.12■□□□□ 0.97
CDC42EP1-201ENST00000249014 SLITRK6Q9H5Y7 841 aa21.12■□□□□ 0.97
CDC42EP1-201ENST00000249014 ANKEF1Q9NU02 776 aa21.12■□□□□ 0.97
CDC42EP1-201ENST00000249014 DOCK1Q14185 1865 aa21.11■□□□□ 0.97
CDC42EP1-201ENST00000249014 CCDC169A6NNP5 214 aa21.11■□□□□ 0.97
CDC42EP1-201ENST00000249014 TTI1O43156 1089 aa21.11■□□□□ 0.97
CDC42EP1-201ENST00000249014 SGPL1O95470 568 aa21.11■□□□□ 0.97
CDC42EP1-201ENST00000249014 USP8P40818 1118 aa21.11■□□□□ 0.97
CDC42EP1-201ENST00000249014 NPTX2P47972 431 aa21.11■□□□□ 0.97
CDC42EP1-201ENST00000249014 SNRPFP62306 86 aaKnown RBP21.11■□□□□ 0.97
CDC42EP1-201ENST00000249014 POU5F1Q01860 360 aaKnown RBP21.11■□□□□ 0.97
CDC42EP1-201ENST00000249014 MAP2K1Q02750 393 aaPredicted RBP21.11■□□□□ 0.97
CDC42EP1-201ENST00000249014 SNRNP35Q16560 246 aaKnown RBP21.11■□□□□ 0.97
CDC42EP1-201ENST00000249014 NBPF12Q5TAG4 269 aaPredicted RBP21.11■□□□□ 0.97
CDC42EP1-201ENST00000249014 NAA35Q5VZE5 725 aa21.11■□□□□ 0.97
CDC42EP1-201ENST00000249014 SEMA4DQ92854 862 aa21.11■□□□□ 0.97
CDC42EP1-201ENST00000249014 KREMEN1Q96MU8 473 aa21.11■□□□□ 0.97
CDC42EP1-201ENST00000249014 IWS1Q96ST2 819 aa21.11■□□□□ 0.97
CDC42EP1-201ENST00000249014 CAPS2Q9BXY5 557 aa21.11■□□□□ 0.97
CDC42EP1-201ENST00000249014 ACP6Q9NPH0 428 aa21.11■□□□□ 0.97
CDC42EP1-201ENST00000249014 RNF146Q9NTX7 359 aa21.11■□□□□ 0.97
CDC42EP1-201ENST00000249014 TCEAL9Q9UHQ7 104 aa21.11■□□□□ 0.97
CDC42EP1-201ENST00000249014 ARID2Q68CP9 1835 aa21.11■□□□□ 0.97
CDC42EP1-201ENST00000249014 SOX10P56693 466 aa21.1■□□□□ 0.97
CDC42EP1-201ENST00000249014 DEFB132Q7Z7B7 95 aa21.1■□□□□ 0.97
CDC42EP1-201ENST00000249014 FBXO41Q8TF61 875 aa21.1■□□□□ 0.97
CDC42EP1-201ENST00000249014 BSNDQ8WZ55 320 aa21.1■□□□□ 0.97
CDC42EP1-201ENST00000249014 ALG3Q92685 438 aa21.1■□□□□ 0.97
CDC42EP1-201ENST00000249014 RNPC3Q96LT9 517 aaKnown RBP21.1■□□□□ 0.97
CDC42EP1-201ENST00000249014 PCDHB18PQ96TA0 734 aa21.1■□□□□ 0.97
CDC42EP1-201ENST00000249014 GINM1Q9NU53 330 aa21.1■□□□□ 0.97
CDC42EP1-201ENST00000249014 RGS17Q9UGC6 210 aaPredicted RBP21.1■□□□□ 0.97
CDC42EP1-201ENST00000249014 GRIN2DO15399 1336 aa21.1■□□□□ 0.97
CDC42EP1-201ENST00000249014 ZNFX1Q9P2E3 1918 aaKnown RBP21.1■□□□□ 0.97
CDC42EP1-201ENST00000249014 TULP1O00294 542 aaPredicted RBP21.1■□□□□ 0.97
CDC42EP1-201ENST00000249014 PMM2O15305 246 aa21.1■□□□□ 0.97
CDC42EP1-201ENST00000249014 DAPK3O43293 454 aa21.1■□□□□ 0.97
CDC42EP1-201ENST00000249014 PPFIA4O75335 1185 aa21.1■□□□□ 0.97
CDC42EP1-201ENST00000249014 CHRNB2P17787 502 aa21.1■□□□□ 0.97
CDC42EP1-201ENST00000249014 CNGA1P29973 690 aa21.1■□□□□ 0.97
CDC42EP1-201ENST00000249014 HADHBP55084 474 aaKnown RBP21.1■□□□□ 0.97
CDC42EP1-201ENST00000249014 MCCD1P59942 119 aaPredicted RBP21.1■□□□□ 0.97
CDC42EP1-201ENST00000249014 ZNF211Q13398 564 aaPredicted RBP21.1■□□□□ 0.97
CDC42EP1-201ENST00000249014 TTC19Q6DKK2 380 aaPredicted RBP21.1■□□□□ 0.97
CDC42EP1-201ENST00000249014 NOP9Q86U38 636 aaKnown RBP21.1■□□□□ 0.97
CDC42EP1-201ENST00000249014 VSIG10LQ86VR7 867 aa21.1■□□□□ 0.97
CDC42EP1-201ENST00000249014 RHOT2Q8IXI1 618 aa21.1■□□□□ 0.97
CDC42EP1-201ENST00000249014 EPS8L1Q8TE68 723 aa21.1■□□□□ 0.97
CDC42EP1-201ENST00000249014 VTI1AQ96AJ9 217 aa21.1■□□□□ 0.97
CDC42EP1-201ENST00000249014 POP1Q99575 1024 aaKnown RBP21.1■□□□□ 0.97
CDC42EP1-201ENST00000249014 MOV10L1Q9BXT6 1211 aaKnown RBP21.1■□□□□ 0.97
CDC42EP1-201ENST00000249014 CARD9Q9H257 536 aa21.1■□□□□ 0.97
CDC42EP1-201ENST00000249014 NOCTQ9UK39 431 aaKnown RBP21.1■□□□□ 0.97
CDC42EP1-201ENST00000249014 PLAAQ9Y263 795 aa21.1■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms