RNA–Protein interactions for RNA: ENST00000248958.4

SDF2L1-201, Transcript of stromal cell derived factor 2 like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2L1, Length 865 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2L1-201ENST00000248958 LINC00301Q8NCQ3 95 aa26.89■■□□□ 1.9
SDF2L1-201ENST00000248958 TYW1Q9NV66 732 aaKnown RBP26.89■■□□□ 1.9
SDF2L1-201ENST00000248958 PCDHB12Q9Y5F1 795 aa26.89■■□□□ 1.9
SDF2L1-201ENST00000248958 CNTNAP2Q9UHC6 1331 aa26.89■■□□□ 1.89
SDF2L1-201ENST00000248958 DLL1O00548 723 aa26.88■■□□□ 1.89
SDF2L1-201ENST00000248958 LAG3P18627 525 aa26.88■■□□□ 1.89
SDF2L1-201ENST00000248958 DMP1Q13316 513 aaPredicted RBP26.88■■□□□ 1.89
SDF2L1-201ENST00000248958 KARSQ15046 597 aaKnown RBP26.88■■□□□ 1.89
SDF2L1-201ENST00000248958 CLLU1OSQ5K130 101 aa26.88■■□□□ 1.89
SDF2L1-201ENST00000248958 UBXN11Q5T124 520 aa26.88■■□□□ 1.89
SDF2L1-201ENST00000248958 UBN1Q9NPG3 1134 aa26.88■■□□□ 1.89
SDF2L1-201ENST00000248958 A0A1B0GUA9 196 aa26.87■■□□□ 1.89
SDF2L1-201ENST00000248958 CARNS1A5YM72 827 aa26.87■■□□□ 1.89
SDF2L1-201ENST00000248958 SPTLC2O15270 562 aa26.87■■□□□ 1.89
SDF2L1-201ENST00000248958 PLCG1P19174 1290 aa26.87■■□□□ 1.89
SDF2L1-201ENST00000248958 NCLP19338 710 aaKnown RBP26.87■■□□□ 1.89
SDF2L1-201ENST00000248958 FOXD4L5Q5VV16 416 aaPredicted RBP26.87■■□□□ 1.89
SDF2L1-201ENST00000248958 GLB1LQ6UWU2 654 aa26.87■■□□□ 1.89
SDF2L1-201ENST00000248958 HACE1Q8IYU2 909 aa26.87■■□□□ 1.89
SDF2L1-201ENST00000248958 HELQQ8TDG4 1101 aa26.87■■□□□ 1.89
SDF2L1-201ENST00000248958 FOXD4L4Q8WXT5 416 aaPredicted RBP26.87■■□□□ 1.89
SDF2L1-201ENST00000248958 RAD54LQ92698 747 aa26.87■■□□□ 1.89
SDF2L1-201ENST00000248958 SYMPKQ92797 1274 aaKnown RBP26.87■■□□□ 1.89
SDF2L1-201ENST00000248958 MRPL38Q96DV4 380 aaKnown RBP26.87■■□□□ 1.89
SDF2L1-201ENST00000248958 CPB2Q96IY4 423 aa26.87■■□□□ 1.89
SDF2L1-201ENST00000248958 EPSTI1Q96J88 318 aa26.87■■□□□ 1.89
SDF2L1-201ENST00000248958 RBM19Q9Y4C8 960 aaKnown RBP26.87■■□□□ 1.89
SDF2L1-201ENST00000248958 A0A0C4DFX4 3053 aa26.86■■□□□ 1.89
SDF2L1-201ENST00000248958 ACKR2O00590 384 aa26.86■■□□□ 1.89
SDF2L1-201ENST00000248958 PRKCBP05771 671 aa26.86■■□□□ 1.89
SDF2L1-201ENST00000248958 PEX3P56589 373 aa26.86■■□□□ 1.89
SDF2L1-201ENST00000248958 MAPK7Q13164 816 aa26.86■■□□□ 1.89
SDF2L1-201ENST00000248958 SLC27A1Q6PCB7 646 aa26.86■■□□□ 1.89
SDF2L1-201ENST00000248958 DAW1Q8N136 415 aa26.86■■□□□ 1.89
SDF2L1-201ENST00000248958 MICALL1Q8N3F8 863 aa26.86■■□□□ 1.89
SDF2L1-201ENST00000248958 CLIC6Q96NY7 704 aa26.86■■□□□ 1.89
SDF2L1-201ENST00000248958 TRIM6Q9C030 488 aaPredicted RBP26.86■■□□□ 1.89
SDF2L1-201ENST00000248958 CCDC113Q9H0I3 377 aa26.86■■□□□ 1.89
SDF2L1-201ENST00000248958 TMEM134Q9H6X4 195 aa26.86■■□□□ 1.89
SDF2L1-201ENST00000248958 CWH43Q9H720 699 aa26.86■■□□□ 1.89
SDF2L1-201ENST00000248958 BLOC1S4Q9NUP1 217 aa26.86■■□□□ 1.89
SDF2L1-201ENST00000248958 STK17AQ9UEE5 414 aa26.86■■□□□ 1.89
SDF2L1-201ENST00000248958 CFAP45Q9UL16 551 aa26.86■■□□□ 1.89
SDF2L1-201ENST00000248958 ODF2LQ9ULJ1 636 aa26.86■■□□□ 1.89
SDF2L1-201ENST00000248958 CHD7Q9P2D1 2997 aa26.85■■□□□ 1.89
SDF2L1-201ENST00000248958 CCDC169A6NNP5 214 aa26.85■■□□□ 1.89
SDF2L1-201ENST00000248958 DDIT3P35638 169 aa26.85■■□□□ 1.89
SDF2L1-201ENST00000248958 PRPF4BQ13523 1007 aaKnown RBP26.85■■□□□ 1.89
SDF2L1-201ENST00000248958 SPECC1Q5M775 1068 aa26.85■■□□□ 1.89
SDF2L1-201ENST00000248958 PPM1EQ8WY54 764 aa26.85■■□□□ 1.89
SDF2L1-201ENST00000248958 LARP4BQ92615 738 aaKnown RBP26.85■■□□□ 1.89
SDF2L1-201ENST00000248958 LPPQ93052 612 aa26.85■■□□□ 1.89
SDF2L1-201ENST00000248958 NTPCRQ9BSD7 190 aaKnown RBP26.85■■□□□ 1.89
SDF2L1-201ENST00000248958 RSAD1Q9HA92 442 aa26.85■■□□□ 1.89
SDF2L1-201ENST00000248958 POLD4Q9HCU8 107 aa26.85■■□□□ 1.89
SDF2L1-201ENST00000248958 KMT5AQ9NQR1 393 aa26.85■■□□□ 1.89
SDF2L1-201ENST00000248958 TFIP11Q9UBB9 837 aaKnown RBP26.85■■□□□ 1.89
SDF2L1-201ENST00000248958 K7ERI5 159 aa26.84■■□□□ 1.89
SDF2L1-201ENST00000248958 N4BP3O15049 544 aa26.84■■□□□ 1.89
SDF2L1-201ENST00000248958 B4GALT5O43286 388 aa26.84■■□□□ 1.89
SDF2L1-201ENST00000248958 OFD1O75665 1012 aa26.84■■□□□ 1.89
SDF2L1-201ENST00000248958 ITGA4P13612 1032 aa26.84■■□□□ 1.89
SDF2L1-201ENST00000248958 NPTX2P47972 431 aa26.84■■□□□ 1.89
SDF2L1-201ENST00000248958 PKP1Q13835 747 aa26.84■■□□□ 1.89
SDF2L1-201ENST00000248958 CCDC85BQ15834 202 aaPredicted RBP26.84■■□□□ 1.89
SDF2L1-201ENST00000248958 TMEM132AQ24JP5 1023 aa26.84■■□□□ 1.89
SDF2L1-201ENST00000248958 AGMOQ6ZNB7 445 aa26.84■■□□□ 1.89
SDF2L1-201ENST00000248958 COLGALT1Q8NBJ5 622 aa26.84■■□□□ 1.89
SDF2L1-201ENST00000248958 SPIRE2Q8WWL2 714 aa26.84■■□□□ 1.89
SDF2L1-201ENST00000248958 EIF2AQ9BY44 585 aaKnown RBP26.84■■□□□ 1.89
SDF2L1-201ENST00000248958 LARSQ9P2J5 1176 aaKnown RBP26.84■■□□□ 1.89
SDF2L1-201ENST00000248958 KANSL3Q9P2N6 904 aa26.84■■□□□ 1.89
SDF2L1-201ENST00000248958 PLAGL2Q9UPG8 496 aa26.84■■□□□ 1.89
SDF2L1-201ENST00000248958 IPPQ9Y573 584 aa26.84■■□□□ 1.89
SDF2L1-201ENST00000248958 PLS3P13797 630 aa26.83■■□□□ 1.89
SDF2L1-201ENST00000248958 SMTNP53814 917 aa26.83■■□□□ 1.89
SDF2L1-201ENST00000248958 UBE3AQ05086 875 aa26.83■■□□□ 1.89
SDF2L1-201ENST00000248958 TIGD5Q53EQ6 642 aa26.83■■□□□ 1.89
SDF2L1-201ENST00000248958 NOMO2Q5JPE7 1267 aa26.83■■□□□ 1.89
SDF2L1-201ENST00000248958 RRAGBQ5VZM2 374 aa26.83■■□□□ 1.89
SDF2L1-201ENST00000248958 CCDC73Q6ZRK6 1079 aa26.83■■□□□ 1.89
SDF2L1-201ENST00000248958 LRRC55Q6ZSA7 311 aa26.83■■□□□ 1.89
SDF2L1-201ENST00000248958 USP49Q70CQ1 688 aa26.83■■□□□ 1.89
SDF2L1-201ENST00000248958 GPBP1Q86WP2 473 aa26.83■■□□□ 1.89
SDF2L1-201ENST00000248958 KLHL23Q8NBE8 558 aa26.83■■□□□ 1.89
SDF2L1-201ENST00000248958 SMG8Q8ND04 991 aaKnown RBP26.83■■□□□ 1.89
SDF2L1-201ENST00000248958 URGCPQ8TCY9 931 aa26.83■■□□□ 1.89
SDF2L1-201ENST00000248958 KCNG4Q8TDN1 519 aa26.83■■□□□ 1.89
SDF2L1-201ENST00000248958 ADPGKQ9BRR6 497 aa26.83■■□□□ 1.89
SDF2L1-201ENST00000248958 ARHGAP28Q9P2N2 729 aa26.83■■□□□ 1.89
SDF2L1-201ENST00000248958 PRRC2BQ5JSZ5 2229 aaKnown RBP26.82■■□□□ 1.88
SDF2L1-201ENST00000248958 H0YCG3 227 aa26.82■■□□□ 1.88
SDF2L1-201ENST00000248958 BRD1O95696 1058 aa26.82■■□□□ 1.88
SDF2L1-201ENST00000248958 PPM1AP35813 382 aa26.82■■□□□ 1.88
SDF2L1-201ENST00000248958 MCM6Q14566 821 aa26.82■■□□□ 1.88
SDF2L1-201ENST00000248958 ARSHQ5FYA8 562 aa26.82■■□□□ 1.88
SDF2L1-201ENST00000248958 APBB1IPQ7Z5R6 666 aaPredicted RBP26.82■■□□□ 1.88
SDF2L1-201ENST00000248958 ZNF558Q96NG5 402 aa26.82■■□□□ 1.88
SDF2L1-201ENST00000248958 KIFC3Q9BVG8 833 aa26.82■■□□□ 1.88
SDF2L1-201ENST00000248958 GRM6O15303 877 aa26.81■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms