RNA–Protein interactions for RNA: ENST00000248594.10

PTPN12-201, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN12, Length 3,406 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-201ENST00000248594 INHBCP55103 352 aa19.6■□□□□ 0.73
PTPN12-201ENST00000248594 ALG3Q92685 438 aa19.6■□□□□ 0.73
PTPN12-201ENST00000248594 TCRBV7S2A1N4TA0A589 114 aa19.6■□□□□ 0.73
PTPN12-201ENST00000248594 RBAK-RBAKDNI3L0D1 243 aa19.6■□□□□ 0.73
PTPN12-201ENST00000248594 O00370 1275 aa19.6■□□□□ 0.73
PTPN12-201ENST00000248594 GYG2O15488 501 aa19.6■□□□□ 0.73
PTPN12-201ENST00000248594 PIAS1O75925 651 aa19.6■□□□□ 0.73
PTPN12-201ENST00000248594 KRT15P19012 456 aa19.6■□□□□ 0.73
PTPN12-201ENST00000248594 POLGP54098 1239 aaPredicted RBP19.6■□□□□ 0.73
PTPN12-201ENST00000248594 PTENP60484 403 aa19.6■□□□□ 0.73
PTPN12-201ENST00000248594 MFSD4BQ5TF39 518 aa19.6■□□□□ 0.73
PTPN12-201ENST00000248594 SYCE1Q8N0S2 351 aa19.6■□□□□ 0.73
PTPN12-201ENST00000248594 SLC25A41Q8N5S1 370 aa19.6■□□□□ 0.73
PTPN12-201ENST00000248594 FBXO41Q8TF61 875 aa19.6■□□□□ 0.73
PTPN12-201ENST00000248594 JDP2Q8WYK2 163 aa19.6■□□□□ 0.73
PTPN12-201ENST00000248594 USP40Q9NVE5 1235 aa19.6■□□□□ 0.73
PTPN12-201ENST00000248594 OAS1P00973 400 aaKnown RBP19.59■□□□□ 0.73
PTPN12-201ENST00000248594 FAM26FQ5R3K3 315 aa19.59■□□□□ 0.73
PTPN12-201ENST00000248594 DCAF12L1Q5VU92 463 aa19.59■□□□□ 0.73
PTPN12-201ENST00000248594 KCNK18Q7Z418 384 aa19.59■□□□□ 0.73
PTPN12-201ENST00000248594 CFAP61Q8NHU2 1237 aa19.59■□□□□ 0.73
PTPN12-201ENST00000248594 KRT35Q92764 455 aa19.59■□□□□ 0.73
PTPN12-201ENST00000248594 PCDHB13Q9Y5F0 798 aa19.59■□□□□ 0.73
PTPN12-201ENST00000248594 LRRN2O75325 713 aa19.59■□□□□ 0.73
PTPN12-201ENST00000248594 TBX10O75333 385 aa19.59■□□□□ 0.73
PTPN12-201ENST00000248594 SLC5A1P13866 664 aa19.59■□□□□ 0.73
PTPN12-201ENST00000248594 UCHL3P15374 230 aa19.59■□□□□ 0.73
PTPN12-201ENST00000248594 IL9RQ01113 521 aa19.59■□□□□ 0.73
PTPN12-201ENST00000248594 SEPT7Q16181 437 aaKnown RBP19.59■□□□□ 0.73
PTPN12-201ENST00000248594 Q4G0T1 1027 aa19.59■□□□□ 0.73
PTPN12-201ENST00000248594 IZUMO2Q6UXV1 221 aa19.59■□□□□ 0.73
PTPN12-201ENST00000248594 ARHGEF18Q6ZSZ5 1173 aa19.59■□□□□ 0.73
PTPN12-201ENST00000248594 EPM2AIP1Q7L775 607 aaPredicted RBP19.59■□□□□ 0.73
PTPN12-201ENST00000248594 MPP4Q96JB8 637 aa19.59■□□□□ 0.73
PTPN12-201ENST00000248594 USP1O94782 785 aa19.58■□□□□ 0.73
PTPN12-201ENST00000248594 CALM1P0DP23 149 aa19.58■□□□□ 0.73
PTPN12-201ENST00000248594 CALM2P0DP24 149 aa19.58■□□□□ 0.73
PTPN12-201ENST00000248594 CALM3P0DP25 149 aa19.58■□□□□ 0.73
PTPN12-201ENST00000248594 UNC13DQ70J99 1090 aa19.58■□□□□ 0.73
PTPN12-201ENST00000248594 EIF1ADQ8N9N8 165 aaKnown RBP19.58■□□□□ 0.73
PTPN12-201ENST00000248594 RAD21O60216 631 aa19.58■□□□□ 0.73
PTPN12-201ENST00000248594 NR2F2P24468 414 aa19.58■□□□□ 0.73
PTPN12-201ENST00000248594 CCDC152Q4G0S7 254 aa19.58■□□□□ 0.73
PTPN12-201ENST00000248594 ZNF746Q6NUN9 644 aaPredicted RBP19.58■□□□□ 0.73
PTPN12-201ENST00000248594 GUF1Q8N442 669 aaKnown RBP19.58■□□□□ 0.73
PTPN12-201ENST00000248594 HIPK4Q8NE63 616 aa19.58■□□□□ 0.73
PTPN12-201ENST00000248594 RBM17Q96I25 401 aaKnown RBP19.58■□□□□ 0.73
PTPN12-201ENST00000248594 LRMDAQ9H2I8 198 aa19.58■□□□□ 0.73
PTPN12-201ENST00000248594 TMEM260Q9NX78 707 aa19.58■□□□□ 0.73
PTPN12-201ENST00000248594 IGSF9BQ9UPX0 1349 aa19.58■□□□□ 0.72
PTPN12-201ENST00000248594 OR6B1O95007 311 aa19.58■□□□□ 0.72
PTPN12-201ENST00000248594 CHKAP35790 457 aa19.58■□□□□ 0.72
PTPN12-201ENST00000248594 CCNG1P51959 295 aa19.58■□□□□ 0.72
PTPN12-201ENST00000248594 BTKQ06187 659 aa19.58■□□□□ 0.72
PTPN12-201ENST00000248594 STRN3Q13033 797 aa19.58■□□□□ 0.72
PTPN12-201ENST00000248594 ACSBG2Q5FVE4 666 aa19.58■□□□□ 0.72
PTPN12-201ENST00000248594 DTNBP1Q96EV8 351 aa19.58■□□□□ 0.72
PTPN12-201ENST00000248594 CCDC97Q96F63 343 aaPredicted RBP19.58■□□□□ 0.72
PTPN12-201ENST00000248594 TRAPPC9Q96Q05 1148 aa19.58■□□□□ 0.72
PTPN12-201ENST00000248594 TSPYL2Q9H2G4 693 aaPredicted RBP19.58■□□□□ 0.72
PTPN12-201ENST00000248594 HDAC9Q9UKV0 1011 aa19.58■□□□□ 0.72
PTPN12-201ENST00000248594 CLIC2O15247 247 aa19.57■□□□□ 0.72
PTPN12-201ENST00000248594 CYP1A1P04798 512 aaPredicted RBP19.57■□□□□ 0.72
PTPN12-201ENST00000248594 TAC1P20366 129 aa19.57■□□□□ 0.72
PTPN12-201ENST00000248594 LRRC63Q05C16 580 aa19.57■□□□□ 0.72
PTPN12-201ENST00000248594 MTM1Q13496 603 aa19.57■□□□□ 0.72
PTPN12-201ENST00000248594 FAM161BQ96MY7 647 aa19.57■□□□□ 0.72
PTPN12-201ENST00000248594 GRHL1Q9NZI5 618 aa19.57■□□□□ 0.72
PTPN12-201ENST00000248594 SUCLA2Q9P2R7 463 aaPredicted RBP19.57■□□□□ 0.72
PTPN12-201ENST00000248594 NIP7Q9Y221 180 aaKnown RBP eCLIP19.57■□□□□ 0.72
PTPN12-201ENST00000248594 CCNB1P14635 433 aa19.57■□□□□ 0.72
PTPN12-201ENST00000248594 MTMR2Q13614 643 aa19.57■□□□□ 0.72
PTPN12-201ENST00000248594 MTFR1Q15390 333 aa19.57■□□□□ 0.72
PTPN12-201ENST00000248594 TTC27Q6P3X3 843 aa19.57■□□□□ 0.72
PTPN12-201ENST00000248594 ARHGEF26Q96DR7 871 aa19.57■□□□□ 0.72
PTPN12-201ENST00000248594 KIF1AQ12756 1690 aa19.57■□□□□ 0.72
PTPN12-201ENST00000248594 PGM3O95394 542 aa19.57■□□□□ 0.72
PTPN12-201ENST00000248594 LYNP07948 512 aa19.57■□□□□ 0.72
PTPN12-201ENST00000248594 GNAT2P19087 354 aa19.57■□□□□ 0.72
PTPN12-201ENST00000248594 LCA5Q86VQ0 697 aa19.57■□□□□ 0.72
PTPN12-201ENST00000248594 CPNE8Q86YQ8 564 aa19.57■□□□□ 0.72
PTPN12-201ENST00000248594 DDX3XO00571 662 aaKnown RBP eCLIP19.56■□□□□ 0.722e-8■■□□□ 12.3
PTPN12-201ENST00000248594 MAGEB3O15480 346 aa19.56■□□□□ 0.72
PTPN12-201ENST00000248594 ATMINO43313 823 aaPredicted RBP19.56■□□□□ 0.72
PTPN12-201ENST00000248594 GSTA2P09210 222 aa19.56■□□□□ 0.72
PTPN12-201ENST00000248594 DLATP10515 647 aaKnown RBP19.56■□□□□ 0.72
PTPN12-201ENST00000248594 CTSWP56202 376 aa19.56■□□□□ 0.72
PTPN12-201ENST00000248594 MPP3Q13368 585 aa19.56■□□□□ 0.72
PTPN12-201ENST00000248594 KBTBD2Q8IY47 623 aa19.56■□□□□ 0.72
PTPN12-201ENST00000248594 RBM46Q8TBY0 533 aaKnown RBP19.56■□□□□ 0.72
PTPN12-201ENST00000248594 MIPOL1Q8TD10 442 aa19.56■□□□□ 0.72
PTPN12-201ENST00000248594 TBCKQ8TEA7 893 aa19.56■□□□□ 0.72
PTPN12-201ENST00000248594 SLC7A6OSQ96CW6 309 aaPredicted RBP19.56■□□□□ 0.72
PTPN12-201ENST00000248594 BMP2KQ9NSY1 1161 aaPredicted RBP19.56■□□□□ 0.72
PTPN12-201ENST00000248594 TFCP2L1Q9NZI6 479 aa19.56■□□□□ 0.72
PTPN12-201ENST00000248594 PCDHGA4Q9Y5G9 962 aa19.56■□□□□ 0.72
PTPN12-201ENST00000248594 CETN2P41208 172 aa19.56■□□□□ 0.72
PTPN12-201ENST00000248594 PDIA5Q14554 519 aa19.56■□□□□ 0.72
PTPN12-201ENST00000248594 IRF2BP2Q7Z5L9 587 aa19.56■□□□□ 0.72
PTPN12-201ENST00000248594 RNF168Q8IYW5 571 aaPredicted RBP19.56■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms