RNA–Protein interactions for RNA: ENST00000243253.7

SEC61A1-201, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC61A1, Length 3,635 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-201ENST00000243253 DNAJC12Q9UKB3 198 aa12.93□□□□□ -0.34
SEC61A1-201ENST00000243253 AMFRQ9UKV5 643 aa12.93□□□□□ -0.34
SEC61A1-201ENST00000243253 DDTLA6NHG4 134 aaPredicted RBP12.92□□□□□ -0.34
SEC61A1-201ENST00000243253 LMNB1P20700 586 aa12.92□□□□□ -0.34
SEC61A1-201ENST00000243253 RPL21P46778 160 aaKnown RBP12.92□□□□□ -0.34
SEC61A1-201ENST00000243253 DR1Q01658 176 aa12.92□□□□□ -0.34
SEC61A1-201ENST00000243253 DHX34Q14147 1143 aaKnown RBP12.92□□□□□ -0.34
SEC61A1-201ENST00000243253 CERKLQ49MI3 558 aaPredicted RBP12.92□□□□□ -0.34
SEC61A1-201ENST00000243253 PCIF1Q9H4Z3 704 aa12.92□□□□□ -0.34
SEC61A1-201ENST00000243253 CNOT10Q9H9A5 744 aaKnown RBP12.92□□□□□ -0.34
SEC61A1-201ENST00000243253 AAASQ9NRG9 546 aa12.92□□□□□ -0.34
SEC61A1-201ENST00000243253 APEX2Q9UBZ4 518 aa12.92□□□□□ -0.34
SEC61A1-201ENST00000243253 FAM198AQ9UFP1 575 aa12.92□□□□□ -0.34
SEC61A1-201ENST00000243253 UTP11Q9Y3A2 253 aaKnown RBP12.92□□□□□ -0.34
SEC61A1-201ENST00000243253 FAM187AA6NFU0 413 aa12.92□□□□□ -0.34
SEC61A1-201ENST00000243253 CHUKO15111 745 aa12.92□□□□□ -0.34
SEC61A1-201ENST00000243253 IFI35P80217 286 aaPredicted RBP12.92□□□□□ -0.34
SEC61A1-201ENST00000243253 ICA1Q05084 483 aa12.92□□□□□ -0.34
SEC61A1-201ENST00000243253 KIAA1755Q5JYT7 1200 aa12.92□□□□□ -0.34
SEC61A1-201ENST00000243253 CHMP6Q96FZ7 201 aa12.92□□□□□ -0.34
SEC61A1-201ENST00000243253 GMCL1Q96IK5 515 aa12.92□□□□□ -0.34
SEC61A1-201ENST00000243253 ATP8A1Q9Y2Q0 1164 aa12.92□□□□□ -0.34
SEC61A1-201ENST00000243253 ANKRD62A6NC57 917 aa12.92□□□□□ -0.34
SEC61A1-201ENST00000243253 UBE4BO95155 1302 aa12.92□□□□□ -0.34
SEC61A1-201ENST00000243253 CHRNB2P17787 502 aa12.92□□□□□ -0.34
SEC61A1-201ENST00000243253 RRP1BQ14684 758 aaKnown RBP12.92□□□□□ -0.34
SEC61A1-201ENST00000243253 SGSM3Q96HU1 749 aa12.92□□□□□ -0.34
SEC61A1-201ENST00000243253 MYCBPQ99417 103 aaPredicted RBP12.92□□□□□ -0.34
SEC61A1-201ENST00000243253 COA1Q9GZY4 146 aa12.92□□□□□ -0.34
SEC61A1-201ENST00000243253 AGPAT3Q9NRZ7 376 aa12.92□□□□□ -0.34
SEC61A1-201ENST00000243253 HAUS2Q9NVX0 235 aa12.92□□□□□ -0.34
SEC61A1-201ENST00000243253 TPX2Q9ULW0 747 aaKnown RBP12.92□□□□□ -0.34
SEC61A1-201ENST00000243253 ARID2Q68CP9 1835 aa12.91□□□□□ -0.34
SEC61A1-201ENST00000243253 LOC102724159A0A0B4J2E5 919 aa12.91□□□□□ -0.34
SEC61A1-201ENST00000243253 TCRBV7S2A1N4TA0A589 114 aa12.91□□□□□ -0.34
SEC61A1-201ENST00000243253 H0YHG0 523 aa12.91□□□□□ -0.34
SEC61A1-201ENST00000243253 CHN1P15882 459 aa12.91□□□□□ -0.34
SEC61A1-201ENST00000243253 PSMC2P35998 433 aaKnown RBP12.91□□□□□ -0.34
SEC61A1-201ENST00000243253 MNAT1P51948 309 aa12.91□□□□□ -0.34
SEC61A1-201ENST00000243253 PMS2P54278 862 aa12.91□□□□□ -0.34
SEC61A1-201ENST00000243253 PWP2Q15269 919 aaKnown RBP12.91□□□□□ -0.34
SEC61A1-201ENST00000243253 CCDC91Q7Z6B0 441 aa12.91□□□□□ -0.34
SEC61A1-201ENST00000243253 SLC20A1Q8WUM9 679 aa12.91□□□□□ -0.34
SEC61A1-201ENST00000243253 P3H4Q92791 437 aa12.91□□□□□ -0.34
SEC61A1-201ENST00000243253 ART4Q93070 314 aa12.91□□□□□ -0.34
SEC61A1-201ENST00000243253 TCEAL9Q9UHQ7 104 aa12.91□□□□□ -0.34
SEC61A1-201ENST00000243253 GOLGA6L10A6NI86 522 aa12.91□□□□□ -0.34
SEC61A1-201ENST00000243253 FOXN3O00409 490 aaPredicted RBP12.91□□□□□ -0.34
SEC61A1-201ENST00000243253 DLG4P78352 724 aa12.91□□□□□ -0.34
SEC61A1-201ENST00000243253 DGKZQ13574 1117 aa12.91□□□□□ -0.34
SEC61A1-201ENST00000243253 AOC3Q16853 763 aa12.91□□□□□ -0.34
SEC61A1-201ENST00000243253 FAM186BQ8IYM0 893 aa12.91□□□□□ -0.34
SEC61A1-201ENST00000243253 SLC5A5Q92911 643 aa12.91□□□□□ -0.34
SEC61A1-201ENST00000243253 TEKT1Q969V4 418 aa12.91□□□□□ -0.34
SEC61A1-201ENST00000243253 INTS2Q9H0H0 1204 aaKnown RBP12.91□□□□□ -0.34
SEC61A1-201ENST00000243253 SEMA4AQ9H3S1 761 aa12.91□□□□□ -0.34
SEC61A1-201ENST00000243253 DAAM1Q9Y4D1 1078 aa12.91□□□□□ -0.34
SEC61A1-201ENST00000243253 ALG6Q9Y672 507 aa12.91□□□□□ -0.34
SEC61A1-201ENST00000243253 POLRMTO00411 1230 aaKnown RBP12.9□□□□□ -0.34
SEC61A1-201ENST00000243253 PHF2O75151 1096 aa12.9□□□□□ -0.34
SEC61A1-201ENST00000243253 APBA3O96018 575 aa12.9□□□□□ -0.34
SEC61A1-201ENST00000243253 GAP43P17677 238 aa12.9□□□□□ -0.34
SEC61A1-201ENST00000243253 RPL13P26373 211 aaKnown RBP12.9□□□□□ -0.34
SEC61A1-201ENST00000243253 ECE1P42892 770 aa12.9□□□□□ -0.34
SEC61A1-201ENST00000243253 ZNF211Q13398 564 aaPredicted RBP12.9□□□□□ -0.34
SEC61A1-201ENST00000243253 SLC29A2Q14542 456 aa12.9□□□□□ -0.34
SEC61A1-201ENST00000243253 PPP2R5AQ15172 486 aa12.9□□□□□ -0.34
SEC61A1-201ENST00000243253 GALNTL6Q49A17 601 aa12.9□□□□□ -0.34
SEC61A1-201ENST00000243253 ZFYVE27Q5T4F4 411 aa12.9□□□□□ -0.34
SEC61A1-201ENST00000243253 MFSD5Q6N075 450 aa12.9□□□□□ -0.34
SEC61A1-201ENST00000243253 CPNE8Q86YQ8 564 aa12.9□□□□□ -0.34
SEC61A1-201ENST00000243253 PARP9Q8IXQ6 854 aa12.9□□□□□ -0.34
SEC61A1-201ENST00000243253 SP8Q8IXZ3 490 aa12.9□□□□□ -0.34
SEC61A1-201ENST00000243253 SYCP3Q8IZU3 236 aa12.9□□□□□ -0.34
SEC61A1-201ENST00000243253 C12orf50Q8NA57 414 aaPredicted RBP12.9□□□□□ -0.34
SEC61A1-201ENST00000243253 BANK1Q8NDB2 785 aa12.9□□□□□ -0.34
SEC61A1-201ENST00000243253 PLEKHO2Q8TD55 490 aa12.9□□□□□ -0.34
SEC61A1-201ENST00000243253 PCDHB18PQ96TA0 734 aa12.9□□□□□ -0.34
SEC61A1-201ENST00000243253 TUFT1Q9NNX1 390 aa12.9□□□□□ -0.34
SEC61A1-201ENST00000243253 NOCTQ9UK39 431 aaKnown RBP12.9□□□□□ -0.34
SEC61A1-201ENST00000243253 RABGAP1Q9Y3P9 1069 aa12.9□□□□□ -0.34
SEC61A1-201ENST00000243253 STK24Q9Y6E0 443 aa12.9□□□□□ -0.34
SEC61A1-201ENST00000243253 TBCAO75347 108 aaKnown RBP12.9□□□□□ -0.34
SEC61A1-201ENST00000243253 EPC2Q52LR7 807 aa12.9□□□□□ -0.34
SEC61A1-201ENST00000243253 ODF2Q5BJF6 829 aa12.9□□□□□ -0.34
SEC61A1-201ENST00000243253 RHBDF2Q6PJF5 856 aa12.9□□□□□ -0.34
SEC61A1-201ENST00000243253 MYCT1Q8N699 235 aa12.9□□□□□ -0.34
SEC61A1-201ENST00000243253 CCDC17Q96LX7 622 aa12.9□□□□□ -0.34
SEC61A1-201ENST00000243253 CCDC113Q9H0I3 377 aa12.9□□□□□ -0.34
SEC61A1-201ENST00000243253 RAB17Q9H0T7 212 aa12.9□□□□□ -0.34
SEC61A1-201ENST00000243253 QTRT2Q9H974 415 aaKnown RBP12.9□□□□□ -0.34
SEC61A1-201ENST00000243253 FZD1Q9UP38 647 aa12.9□□□□□ -0.34
SEC61A1-201ENST00000243253 TRPC6Q9Y210 931 aa12.9□□□□□ -0.34
SEC61A1-201ENST00000243253 FER1L6Q2WGJ9 1857 aa12.9□□□□□ -0.34
SEC61A1-201ENST00000243253 ALADP13716 330 aa12.9□□□□□ -0.34
SEC61A1-201ENST00000243253 SSTR3P32745 418 aaPredicted RBP12.9□□□□□ -0.34
SEC61A1-201ENST00000243253 ELF3P78545 371 aaPredicted RBP12.9□□□□□ -0.34
SEC61A1-201ENST00000243253 ITIH4Q14624 930 aa12.9□□□□□ -0.34
SEC61A1-201ENST00000243253 KRT71Q3SY84 523 aa12.9□□□□□ -0.34
SEC61A1-201ENST00000243253 TACO1Q9BSH4 297 aaKnown RBP12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms