RNA–Protein interactions for RNA: ENST00000237186.10

UBE3D-201, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-201ENST00000237186 GJA3Q9Y6H8 435 aa17.52■□□□□ 0.4
UBE3D-201ENST00000237186 TMEM150BA6NC51 233 aa17.52■□□□□ 0.39
UBE3D-201ENST00000237186 ERICH4A6NGS2 130 aa17.52■□□□□ 0.39
UBE3D-201ENST00000237186 CEP104O60308 925 aa17.52■□□□□ 0.39
UBE3D-201ENST00000237186 PHACTR2O75167 634 aa17.52■□□□□ 0.39
UBE3D-201ENST00000237186 RPS6KA5O75582 802 aa17.52■□□□□ 0.39
UBE3D-201ENST00000237186 STAM2O75886 525 aa17.52■□□□□ 0.39
UBE3D-201ENST00000237186 KCNA2P16389 499 aa17.52■□□□□ 0.39
UBE3D-201ENST00000237186 NPTX2P47972 431 aa17.52■□□□□ 0.39
UBE3D-201ENST00000237186 LMAN1P49257 510 aa17.52■□□□□ 0.39
UBE3D-201ENST00000237186 CARSP49589 748 aaKnown RBP17.52■□□□□ 0.39
UBE3D-201ENST00000237186 RTP1P59025 263 aa17.52■□□□□ 0.39
UBE3D-201ENST00000237186 ARHGAP44Q17R89 818 aa17.52■□□□□ 0.39
UBE3D-201ENST00000237186 FAM102BQ5T8I3 360 aa17.52■□□□□ 0.39
UBE3D-201ENST00000237186 DAAM2Q86T65 1068 aa17.52■□□□□ 0.39
UBE3D-201ENST00000237186 CDHR1Q96JP9 859 aa17.52■□□□□ 0.39
UBE3D-201ENST00000237186 FBXL18Q96ME1 805 aa17.52■□□□□ 0.39
UBE3D-201ENST00000237186 TMEM117Q9H0C3 514 aa17.52■□□□□ 0.39
UBE3D-201ENST00000237186 ISCUQ9H1K1 167 aa17.52■□□□□ 0.39
UBE3D-201ENST00000237186 PDLIM7Q9NR12 457 aa17.52■□□□□ 0.39
UBE3D-201ENST00000237186 AMFRQ9UKV5 643 aa17.52■□□□□ 0.39
UBE3D-201ENST00000237186 COQ4Q9Y3A0 265 aa17.52■□□□□ 0.39
UBE3D-201ENST00000237186 NFASCO94856 1347 aa17.52■□□□□ 0.39
UBE3D-201ENST00000237186 RAD51CO43502 376 aa17.51■□□□□ 0.39
UBE3D-201ENST00000237186 CNGA1P29973 690 aa17.51■□□□□ 0.39
UBE3D-201ENST00000237186 MXI1P50539 228 aa17.51■□□□□ 0.39
UBE3D-201ENST00000237186 GUCY2DQ02846 1103 aa17.51■□□□□ 0.39
UBE3D-201ENST00000237186 DMP1Q13316 513 aaPredicted RBP17.51■□□□□ 0.39
UBE3D-201ENST00000237186 APOBEC3FQ8IUX4 373 aaKnown RBP17.51■□□□□ 0.39
UBE3D-201ENST00000237186 ARHGEF19Q8IW93 802 aa17.51■□□□□ 0.39
UBE3D-201ENST00000237186 ATP6V0A1Q93050 837 aa17.51■□□□□ 0.39
UBE3D-201ENST00000237186 ZKSCAN4Q969J2 545 aaPredicted RBP17.51■□□□□ 0.39
UBE3D-201ENST00000237186 SH2D3AQ9BRG2 576 aa17.51■□□□□ 0.39
UBE3D-201ENST00000237186 CALCOCO1Q9P1Z2 691 aa17.51■□□□□ 0.39
UBE3D-201ENST00000237186 ZNF862O60290 1169 aa17.5■□□□□ 0.39
UBE3D-201ENST00000237186 BUB1BO60566 1050 aaPredicted RBP17.5■□□□□ 0.39
UBE3D-201ENST00000237186 RGS20O76081 388 aa17.5■□□□□ 0.39
UBE3D-201ENST00000237186 ADRB2P07550 413 aa17.5■□□□□ 0.39
UBE3D-201ENST00000237186 ACTN2P35609 894 aa17.5■□□□□ 0.39
UBE3D-201ENST00000237186 PLA2G4FQ68DD2 849 aa17.5■□□□□ 0.39
UBE3D-201ENST00000237186 SNRNP48Q6IEG0 339 aaKnown RBP17.5■□□□□ 0.39
UBE3D-201ENST00000237186 RHOT2Q8IXI1 618 aa17.5■□□□□ 0.39
UBE3D-201ENST00000237186 FAM71AQ8IYT1 594 aa17.5■□□□□ 0.39
UBE3D-201ENST00000237186 ZSWIM2Q8NEG5 633 aa17.5■□□□□ 0.39
UBE3D-201ENST00000237186 AFAP1L1Q8TED9 768 aa17.5■□□□□ 0.39
UBE3D-201ENST00000237186 WHAMMQ8TF30 809 aa17.5■□□□□ 0.39
UBE3D-201ENST00000237186 CASKIN2Q8WXE0 1202 aa17.5■□□□□ 0.39
UBE3D-201ENST00000237186 KCNN1Q92952 543 aa17.5■□□□□ 0.39
UBE3D-201ENST00000237186 WRNIP1Q96S55 665 aa17.5■□□□□ 0.39
UBE3D-201ENST00000237186 OSGEPQ9NPF4 335 aa17.5■□□□□ 0.39
UBE3D-201ENST00000237186 TMCO5BA8MYB1 307 aa17.5■□□□□ 0.39
UBE3D-201ENST00000237186 ANKRD63C9JTQ0 380 aa17.5■□□□□ 0.39
UBE3D-201ENST00000237186 OPA1O60313 960 aa17.5■□□□□ 0.39
UBE3D-201ENST00000237186 GTF2H1P32780 548 aa17.5■□□□□ 0.39
UBE3D-201ENST00000237186 RNASE9P60153 205 aaKnown RBP17.5■□□□□ 0.39
UBE3D-201ENST00000237186 SNRNP35Q16560 246 aaKnown RBP17.5■□□□□ 0.39
UBE3D-201ENST00000237186 CATSPERGQ6ZRH7 1159 aa17.5■□□□□ 0.39
UBE3D-201ENST00000237186 IQCKQ8N0W5 287 aa17.5■□□□□ 0.39
UBE3D-201ENST00000237186 TMC2Q8TDI7 906 aa17.5■□□□□ 0.39
UBE3D-201ENST00000237186 PARD3BQ8TEW8 1205 aa17.5■□□□□ 0.39
UBE3D-201ENST00000237186 RIN2Q8WYP3 895 aaPredicted RBP17.5■□□□□ 0.39
UBE3D-201ENST00000237186 MFSD14AQ96MC6 490 aa17.5■□□□□ 0.39
UBE3D-201ENST00000237186 NFU1Q9UMS0 254 aa17.5■□□□□ 0.39
UBE3D-201ENST00000237186 NOC2LQ9Y3T9 749 aaKnown RBP17.5■□□□□ 0.39
UBE3D-201ENST00000237186 PFASO15067 1338 aa17.49■□□□□ 0.39
UBE3D-201ENST00000237186 GOLGA8KD6RF30 607 aa17.49■□□□□ 0.39
UBE3D-201ENST00000237186 DDX3YO15523 660 aaKnown RBP17.49■□□□□ 0.39
UBE3D-201ENST00000237186 LRRN2O75325 713 aa17.49■□□□□ 0.39
UBE3D-201ENST00000237186 PSAPP07602 524 aa17.49■□□□□ 0.39
UBE3D-201ENST00000237186 GZMAP12544 262 aa17.49■□□□□ 0.39
UBE3D-201ENST00000237186 GPC3P51654 580 aa17.49■□□□□ 0.39
UBE3D-201ENST00000237186 TMEM132BQ14DG7 1078 aa17.49■□□□□ 0.39
UBE3D-201ENST00000237186 KRT39Q6A163 491 aa17.49■□□□□ 0.39
UBE3D-201ENST00000237186 PALB2Q86YC2 1186 aa17.49■□□□□ 0.39
UBE3D-201ENST00000237186 CBWD2Q8IUF1 395 aa17.49■□□□□ 0.39
UBE3D-201ENST00000237186 GOLGA6L1Q8N7Z2 621 aa17.49■□□□□ 0.39
UBE3D-201ENST00000237186 TSEN2Q8NCE0 465 aaKnown RBP17.49■□□□□ 0.39
UBE3D-201ENST00000237186 MCPH1Q8NEM0 835 aa17.49■□□□□ 0.39
UBE3D-201ENST00000237186 ARHGEF26Q96DR7 871 aa17.49■□□□□ 0.39
UBE3D-201ENST00000237186 TEX13BQ9BXU2 312 aa17.49■□□□□ 0.39
UBE3D-201ENST00000237186 CARD9Q9H257 536 aa17.49■□□□□ 0.39
UBE3D-201ENST00000237186 SLITRK6Q9H5Y7 841 aa17.49■□□□□ 0.39
UBE3D-201ENST00000237186 TMEM8AQ9HCN3 771 aa17.49■□□□□ 0.39
UBE3D-201ENST00000237186 KMT5AQ9NQR1 393 aa17.49■□□□□ 0.39
UBE3D-201ENST00000237186 CYP39A1Q9NYL5 469 aa17.49■□□□□ 0.39
UBE3D-201ENST00000237186 TAS2R14Q9NYV8 317 aa17.49■□□□□ 0.39
UBE3D-201ENST00000237186 GABBR1Q9UBS5 961 aa17.49■□□□□ 0.39
UBE3D-201ENST00000237186 MYPNQ86TC9 1320 aa17.48■□□□□ 0.39
UBE3D-201ENST00000237186 ZNF541Q9H0D2 1346 aa17.48■□□□□ 0.39
UBE3D-201ENST00000237186 IGSF9BQ9UPX0 1349 aa17.48■□□□□ 0.39
UBE3D-201ENST00000237186 DENND3A2RUS2 1198 aa17.48■□□□□ 0.39
UBE3D-201ENST00000237186 CCDC169A6NNP5 214 aa17.48■□□□□ 0.39
UBE3D-201ENST00000237186 SPATA31C2B4DYI2 1134 aa17.48■□□□□ 0.39
UBE3D-201ENST00000237186 DGAT1O75907 488 aa17.48■□□□□ 0.39
UBE3D-201ENST00000237186 ABCD1P33897 745 aa17.48■□□□□ 0.39
UBE3D-201ENST00000237186 HMGCS2P54868 508 aa17.48■□□□□ 0.39
UBE3D-201ENST00000237186 HNRNPH2P55795 449 aaKnown RBP17.48■□□□□ 0.39
UBE3D-201ENST00000237186 CUL1Q13616 776 aa17.48■□□□□ 0.39
UBE3D-201ENST00000237186 KLRG1Q96E93 195 aa17.48■□□□□ 0.39
UBE3D-201ENST00000237186 CEP170P1Q96L14 293 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms