RNA–Protein interactions for RNA: ENST00000233468.4

SF3B6-201, Transcript of splicing factor 3b subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B6, Length 770 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-201ENST00000233468 KRT18P05783 430 aaKnown RBP12.47□□□□□ -0.41
SF3B6-201ENST00000233468 SKIP12755 728 aa12.47□□□□□ -0.41
SF3B6-201ENST00000233468 HOXB1P14653 301 aaPredicted RBP12.47□□□□□ -0.41
SF3B6-201ENST00000233468 PLCG1P19174 1290 aa12.47□□□□□ -0.41
SF3B6-201ENST00000233468 SCP2P22307 547 aa12.47□□□□□ -0.41
SF3B6-201ENST00000233468 AXLP30530 894 aa12.47□□□□□ -0.41
SF3B6-201ENST00000233468 NAMPTP43490 491 aa12.47□□□□□ -0.41
SF3B6-201ENST00000233468 EFNA5P52803 228 aa12.47□□□□□ -0.41
SF3B6-201ENST00000233468 SMTNP53814 917 aa12.47□□□□□ -0.41
SF3B6-201ENST00000233468 PTENP60484 403 aa12.47□□□□□ -0.41
SF3B6-201ENST00000233468 DMP1Q13316 513 aaPredicted RBP12.47□□□□□ -0.41
SF3B6-201ENST00000233468 RINT1Q6NUQ1 792 aa12.47□□□□□ -0.41
SF3B6-201ENST00000233468 FAM117BQ6P1L5 589 aa12.47□□□□□ -0.41
SF3B6-201ENST00000233468 SLC24A5Q71RS6 500 aa12.47□□□□□ -0.41
SF3B6-201ENST00000233468 KSR1Q8IVT5 923 aa12.47□□□□□ -0.41
SF3B6-201ENST00000233468 DEPTORQ8TB45 409 aa12.47□□□□□ -0.41
SF3B6-201ENST00000233468 TMEM40Q8WWA1 233 aa12.47□□□□□ -0.41
SF3B6-201ENST00000233468 LARP4BQ92615 738 aaKnown RBP12.47□□□□□ -0.41
SF3B6-201ENST00000233468 RAD54LQ92698 747 aa12.47□□□□□ -0.41
SF3B6-201ENST00000233468 KHSRPQ92945 711 aaKnown RBP eCLIP12.47□□□□□ -0.41
SF3B6-201ENST00000233468 EPSTI1Q96J88 318 aa12.47□□□□□ -0.41
SF3B6-201ENST00000233468 PLIN2Q99541 437 aa12.47□□□□□ -0.41
SF3B6-201ENST00000233468 RAD9AQ99638 391 aa12.47□□□□□ -0.41
SF3B6-201ENST00000233468 OSBPL7Q9BZF2 842 aa12.47□□□□□ -0.41
SF3B6-201ENST00000233468 EPHX3Q9H6B9 360 aa12.47□□□□□ -0.41
SF3B6-201ENST00000233468 IFT122Q9HBG6 1241 aa12.47□□□□□ -0.41
SF3B6-201ENST00000233468 RGS18Q9NS28 235 aa12.47□□□□□ -0.41
SF3B6-201ENST00000233468 ZDHHC9Q9Y397 364 aa12.47□□□□□ -0.41
SF3B6-201ENST00000233468 INSL6Q9Y581 213 aa12.47□□□□□ -0.41
SF3B6-201ENST00000233468 MYO7AQ13402 2215 aa12.46□□□□□ -0.41
SF3B6-201ENST00000233468 KAT6AQ92794 2004 aa12.46□□□□□ -0.41
SF3B6-201ENST00000233468 LRRIQ4A6NIV6 560 aa12.46□□□□□ -0.41
SF3B6-201ENST00000233468 H0YCG3 227 aa12.46□□□□□ -0.41
SF3B6-201ENST00000233468 INO80B-WBP1J3KQ70 363 aa12.46□□□□□ -0.41
SF3B6-201ENST00000233468 HOXA2O43364 376 aa12.46□□□□□ -0.41
SF3B6-201ENST00000233468 GJB5O95377 273 aa12.46□□□□□ -0.41
SF3B6-201ENST00000233468 GLRA2P23416 452 aa12.46□□□□□ -0.41
SF3B6-201ENST00000233468 ABCD1P33897 745 aa12.46□□□□□ -0.41
SF3B6-201ENST00000233468 STAT6P42226 847 aa12.46□□□□□ -0.41
SF3B6-201ENST00000233468 SLC12A3P55017 1021 aa12.46□□□□□ -0.41
SF3B6-201ENST00000233468 FOXK1P85037 733 aa12.46□□□□□ -0.41
SF3B6-201ENST00000233468 AMPD3Q01432 767 aa12.46□□□□□ -0.41
SF3B6-201ENST00000233468 GRIN1Q05586 938 aa12.46□□□□□ -0.41
SF3B6-201ENST00000233468 DSG2Q14126 1118 aa12.46□□□□□ -0.41
SF3B6-201ENST00000233468 CSPP1Q1MSJ5 1256 aa12.46□□□□□ -0.41
SF3B6-201ENST00000233468 AAK1Q2M2I8 961 aa12.46□□□□□ -0.41
SF3B6-201ENST00000233468 SPECC1Q5M775 1068 aa12.46□□□□□ -0.41
SF3B6-201ENST00000233468 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.46□□□□□ -0.41
SF3B6-201ENST00000233468 C1orf186Q6ZWK4 172 aa12.46□□□□□ -0.41
SF3B6-201ENST00000233468 SV2BQ7L1I2 683 aa12.46□□□□□ -0.41
SF3B6-201ENST00000233468 NPAS4Q8IUM7 802 aa12.46□□□□□ -0.41
SF3B6-201ENST00000233468 PLPP6Q8IY26 295 aa12.46□□□□□ -0.41
SF3B6-201ENST00000233468 IQUBQ8NA54 791 aa12.46□□□□□ -0.41
SF3B6-201ENST00000233468 ASAP3Q8TDY4 903 aa12.46□□□□□ -0.41
SF3B6-201ENST00000233468 RSPH1Q8WYR4 309 aa12.46□□□□□ -0.41
SF3B6-201ENST00000233468 TOP1MTQ969P6 601 aa12.46□□□□□ -0.41
SF3B6-201ENST00000233468 CCDC51Q96ER9 411 aa12.46□□□□□ -0.41
SF3B6-201ENST00000233468 ZNF668Q96K58 619 aaPredicted RBP12.46□□□□□ -0.41
SF3B6-201ENST00000233468 PRIMPOLQ96LW4 560 aa12.46□□□□□ -0.41
SF3B6-201ENST00000233468 ADAM2Q99965 735 aa12.46□□□□□ -0.41
SF3B6-201ENST00000233468 CUEDC2Q9H467 287 aa12.46□□□□□ -0.41
SF3B6-201ENST00000233468 PRMT7Q9NVM4 692 aaPredicted RBP12.46□□□□□ -0.41
SF3B6-201ENST00000233468 LARSQ9P2J5 1176 aaKnown RBP12.46□□□□□ -0.41
SF3B6-201ENST00000233468 ODF2LQ9ULJ1 636 aa12.46□□□□□ -0.41
SF3B6-201ENST00000233468 RBM19Q9Y4C8 960 aaKnown RBP12.46□□□□□ -0.41
SF3B6-201ENST00000233468 PCDHB7Q9Y5E2 793 aa12.46□□□□□ -0.41
SF3B6-201ENST00000233468 NLRC5Q86WI3 1866 aa12.46□□□□□ -0.42
SF3B6-201ENST00000233468 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.45□□□□□ -0.42
SF3B6-201ENST00000233468 HIP1RO75146 1068 aa12.45□□□□□ -0.42
SF3B6-201ENST00000233468 TBCAO75347 108 aaKnown RBP12.45□□□□□ -0.42
SF3B6-201ENST00000233468 SARSP49591 514 aaKnown RBP12.45□□□□□ -0.42
SF3B6-201ENST00000233468 RAB27AP51159 221 aa12.45□□□□□ -0.42
SF3B6-201ENST00000233468 CAPSQ13938 189 aa12.45□□□□□ -0.42
SF3B6-201ENST00000233468 MAPK6Q16659 721 aa12.45□□□□□ -0.42
SF3B6-201ENST00000233468 ADALQ6DHV7 355 aa12.45□□□□□ -0.42
SF3B6-201ENST00000233468 TWF2Q6IBS0 349 aaKnown RBP12.45□□□□□ -0.42
SF3B6-201ENST00000233468 KCNK18Q7Z418 384 aa12.45□□□□□ -0.42
SF3B6-201ENST00000233468 APBB1IPQ7Z5R6 666 aaPredicted RBP12.45□□□□□ -0.42
SF3B6-201ENST00000233468 GPBP1Q86WP2 473 aa12.45□□□□□ -0.42
SF3B6-201ENST00000233468 LEO1Q8WVC0 666 aaPredicted RBP12.45□□□□□ -0.42
SF3B6-201ENST00000233468 HLA-CQ95604 372 aa12.45□□□□□ -0.42
SF3B6-201ENST00000233468 YME1L1Q96TA2 773 aa12.45□□□□□ -0.42
SF3B6-201ENST00000233468 TMX1Q9H3N1 280 aa12.45□□□□□ -0.42
SF3B6-201ENST00000233468 ELAC1Q9H777 363 aaKnown RBP12.45□□□□□ -0.42
SF3B6-201ENST00000233468 MAGEF1Q9HAY2 307 aa12.45□□□□□ -0.42
SF3B6-201ENST00000233468 CD320Q9NPF0 282 aa12.45□□□□□ -0.42
SF3B6-201ENST00000233468 GPRC5CQ9NQ84 441 aa12.45□□□□□ -0.42
SF3B6-201ENST00000233468 PCDHA7Q9UN72 937 aa12.45□□□□□ -0.42
SF3B6-201ENST00000233468 PIN4Q9Y237 131 aaKnown RBP12.45□□□□□ -0.42
SF3B6-201ENST00000233468 TRIOO75962 3097 aa12.45□□□□□ -0.42
SF3B6-201ENST00000233468 ATG2AQ2TAZ0 1938 aa12.45□□□□□ -0.42
SF3B6-201ENST00000233468 LINC01553A4QN01 128 aa12.44□□□□□ -0.42
SF3B6-201ENST00000233468 GOLGA6L4A6NEF3 574 aa12.44□□□□□ -0.42
SF3B6-201ENST00000233468 CCDC169A6NNP5 214 aa12.44□□□□□ -0.42
SF3B6-201ENST00000233468 FAM13AO94988 1023 aa12.44□□□□□ -0.42
SF3B6-201ENST00000233468 UPP2O95045 317 aa12.44□□□□□ -0.42
SF3B6-201ENST00000233468 EOMESO95936 686 aa12.44□□□□□ -0.42
SF3B6-201ENST00000233468 PLS3P13797 630 aa12.44□□□□□ -0.42
SF3B6-201ENST00000233468 DHX8Q14562 1220 aaKnown RBP12.44□□□□□ -0.42
SF3B6-201ENST00000233468 TMEM132AQ24JP5 1023 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms