RNA–Protein interactions for RNA: ENST00000231130.3

PCDHB3-201, Transcript of protocadherin beta 3, humanhuman

APPRIS P1 BASIC

Gene PCDHB3, Length 3,355 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB3-201ENST00000231130 PHLDB2Q86SQ0 1253 aa15.2■□□□□ 0.02
PCDHB3-201ENST00000231130 ZC3H18Q86VM9 953 aaKnown RBP15.2■□□□□ 0.02
PCDHB3-201ENST00000231130 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.2■□□□□ 0.02
PCDHB3-201ENST00000231130 NT5C3AQ9H0P0 336 aa15.2■□□□□ 0.02
PCDHB3-201ENST00000231130 USP15Q9Y4E8 981 aaPredicted RBP15.2■□□□□ 0.02
PCDHB3-201ENST00000231130 DOCK2Q92608 1830 aa15.2■□□□□ 0.02
PCDHB3-201ENST00000231130 LIN7AO14910 233 aaPredicted RBP15.2■□□□□ 0.02
PCDHB3-201ENST00000231130 PDE6CP51160 858 aa15.2■□□□□ 0.02
PCDHB3-201ENST00000231130 RCN2Q14257 317 aa15.2■□□□□ 0.02
PCDHB3-201ENST00000231130 COG2Q14746 738 aa15.2■□□□□ 0.02
PCDHB3-201ENST00000231130 NFIXQ14938 502 aa15.2■□□□□ 0.02
PCDHB3-201ENST00000231130 ZNF449Q6P9G9 518 aa15.2■□□□□ 0.02
PCDHB3-201ENST00000231130 MTHFD1LQ6UB35 978 aa15.2■□□□□ 0.02
PCDHB3-201ENST00000231130 ATXN2LQ8WWM7 1075 aaKnown RBP15.2■□□□□ 0.02
PCDHB3-201ENST00000231130 TLCD1Q96CP7 247 aa15.2■□□□□ 0.02
PCDHB3-201ENST00000231130 ADAM7Q9H2U9 754 aa15.2■□□□□ 0.02
PCDHB3-201ENST00000231130 PCMTD2Q9NV79 361 aa15.2■□□□□ 0.02
PCDHB3-201ENST00000231130 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.2■□□□□ 0.02
PCDHB3-201ENST00000231130 MTRF1LQ9UGC7 380 aaKnown RBP15.2■□□□□ 0.02
PCDHB3-201ENST00000231130 TCRBV7S2A1N4TA0A589 114 aa15.19■□□□□ 0.02
PCDHB3-201ENST00000231130 GH1P01241 217 aa15.19■□□□□ 0.02
PCDHB3-201ENST00000231130 USH1GQ495M9 461 aa15.19■□□□□ 0.02
PCDHB3-201ENST00000231130 ACBD5Q5T8D3 534 aaPredicted RBP15.19■□□□□ 0.02
PCDHB3-201ENST00000231130 DNAJC9Q8WXX5 260 aa15.19■□□□□ 0.02
PCDHB3-201ENST00000231130 ELMO3Q96BJ8 720 aa15.19■□□□□ 0.02
PCDHB3-201ENST00000231130 DHX36Q9H2U1 1008 aaKnown RBP15.19■□□□□ 0.02
PCDHB3-201ENST00000231130 MMADHCQ9H3L0 296 aaPredicted RBP15.19■□□□□ 0.02
PCDHB3-201ENST00000231130 RASAL2Q9UJF2 1139 aa15.19■□□□□ 0.02
PCDHB3-201ENST00000231130 ANKRD63C9JTQ0 380 aa15.19■□□□□ 0.02
PCDHB3-201ENST00000231130 TBCAO75347 108 aaKnown RBP15.19■□□□□ 0.02
PCDHB3-201ENST00000231130 NMT1P30419 496 aaKnown RBP15.19■□□□□ 0.02
PCDHB3-201ENST00000231130 C10orf76Q5T2E6 689 aa15.19■□□□□ 0.02
PCDHB3-201ENST00000231130 NSMFQ6X4W1 530 aa15.19■□□□□ 0.02
PCDHB3-201ENST00000231130 NEDD1Q8NHV4 660 aa15.19■□□□□ 0.02
PCDHB3-201ENST00000231130 UCMAQ8WVF2 138 aa15.19■□□□□ 0.02
PCDHB3-201ENST00000231130 PWWP2AQ96N64 755 aa15.19■□□□□ 0.02
PCDHB3-201ENST00000231130 ACP6Q9NPH0 428 aa15.19■□□□□ 0.02
PCDHB3-201ENST00000231130 USP40Q9NVE5 1235 aa15.19■□□□□ 0.02
PCDHB3-201ENST00000231130 WDR35Q9P2L0 1181 aa15.19■□□□□ 0.02
PCDHB3-201ENST00000231130 ASAP2O43150 1006 aa15.19■□□□□ 0.02
PCDHB3-201ENST00000231130 ATP6V1G1O75348 118 aa15.19■□□□□ 0.02
PCDHB3-201ENST00000231130 PAEPP09466 180 aa15.19■□□□□ 0.02
PCDHB3-201ENST00000231130 AKR1B1P15121 316 aa15.19■□□□□ 0.02
PCDHB3-201ENST00000231130 CCDC137Q6PK04 289 aaKnown RBP15.19■□□□□ 0.02
PCDHB3-201ENST00000231130 INTS8Q75QN2 995 aaKnown RBP15.19■□□□□ 0.02
PCDHB3-201ENST00000231130 ARHGEF2Q92974 986 aaKnown RBP15.19■□□□□ 0.02
PCDHB3-201ENST00000231130 HES6Q96HZ4 224 aa15.19■□□□□ 0.02
PCDHB3-201ENST00000231130 SETDB2Q96T68 719 aa15.19■□□□□ 0.02
PCDHB3-201ENST00000231130 FAM118BQ9BPY3 351 aa15.19■□□□□ 0.02
PCDHB3-201ENST00000231130 EPB41L4BQ9H329 900 aa15.19■□□□□ 0.02
PCDHB3-201ENST00000231130 DNM3Q9UQ16 869 aa15.19■□□□□ 0.02
PCDHB3-201ENST00000231130 ALG6Q9Y672 507 aa15.19■□□□□ 0.02
PCDHB3-201ENST00000231130 TMEM120BA0PK00 339 aa15.18■□□□□ 0.02
PCDHB3-201ENST00000231130 ZBTB39O15060 712 aa15.18■□□□□ 0.02
PCDHB3-201ENST00000231130 PPP1R11O60927 126 aaPredicted RBP15.18■□□□□ 0.02
PCDHB3-201ENST00000231130 SP100P23497 879 aaPredicted RBP15.18■□□□□ 0.02
PCDHB3-201ENST00000231130 ERFP50548 548 aa15.18■□□□□ 0.02
PCDHB3-201ENST00000231130 PTENP60484 403 aa15.18■□□□□ 0.02
PCDHB3-201ENST00000231130 DEUP1Q05D60 604 aa15.18■□□□□ 0.02
PCDHB3-201ENST00000231130 DUPD1Q68J44 220 aa15.18■□□□□ 0.02
PCDHB3-201ENST00000231130 CATSPER3Q86XQ3 398 aa15.18■□□□□ 0.02
PCDHB3-201ENST00000231130 JMJD4Q9H9V9 463 aa15.18■□□□□ 0.02
PCDHB3-201ENST00000231130 MMP13P45452 471 aa15.18■□□□□ 0.02
PCDHB3-201ENST00000231130 SF3B3Q15393 1217 aaKnown RBP15.18■□□□□ 0.02
PCDHB3-201ENST00000231130 CAPN12Q6ZSI9 719 aa15.18■□□□□ 0.02
PCDHB3-201ENST00000231130 CEP128Q6ZU80 1094 aa15.18■□□□□ 0.02
PCDHB3-201ENST00000231130 MYCT1Q8N699 235 aa15.18■□□□□ 0.02
PCDHB3-201ENST00000231130 TMEM237Q96Q45 408 aa15.18■□□□□ 0.02
PCDHB3-201ENST00000231130 KLHL14Q9P2G3 628 aa15.18■□□□□ 0.02
PCDHB3-201ENST00000231130 PCDHA2Q9Y5H9 948 aa15.18■□□□□ 0.02
PCDHB3-201ENST00000231130 ZNF142P52746 1687 aaPredicted RBP15.18■□□□□ 0.02
PCDHB3-201ENST00000231130 FAM196BA6NMK8 535 aa15.18■□□□□ 0.02
PCDHB3-201ENST00000231130 KIAA0391O15091 583 aaKnown RBP15.18■□□□□ 0.02
PCDHB3-201ENST00000231130 KLRC3Q07444 240 aa15.18■□□□□ 0.02
PCDHB3-201ENST00000231130 MAPK7Q13164 816 aa15.18■□□□□ 0.02
PCDHB3-201ENST00000231130 EPHA7Q15375 998 aa15.18■□□□□ 0.02
PCDHB3-201ENST00000231130 C6orf118Q5T5N4 469 aa15.18■□□□□ 0.02
PCDHB3-201ENST00000231130 SLC20A1Q8WUM9 679 aa15.18■□□□□ 0.02
PCDHB3-201ENST00000231130 C1orf54Q8WWF1 131 aa15.18■□□□□ 0.02
PCDHB3-201ENST00000231130 RFFLQ8WZ73 363 aa15.18■□□□□ 0.02
PCDHB3-201ENST00000231130 KIFAP3Q92845 792 aa15.18■□□□□ 0.02
PCDHB3-201ENST00000231130 SLC35C1Q96A29 364 aa15.18■□□□□ 0.02
PCDHB3-201ENST00000231130 METTL5Q9NRN9 209 aaKnown RBP15.18■□□□□ 0.02
PCDHB3-201ENST00000231130 ZDHHC18Q9NUE0 388 aa15.18■□□□□ 0.02
PCDHB3-201ENST00000231130 COG5Q9UP83 839 aa15.18■□□□□ 0.02
PCDHB3-201ENST00000231130 AFF2P51816 1311 aa15.17■□□□□ 0.02
PCDHB3-201ENST00000231130 CALUO43852 315 aaPredicted RBP15.17■□□□□ 0.02
PCDHB3-201ENST00000231130 DDB1Q16531 1140 aa15.17■□□□□ 0.02
PCDHB3-201ENST00000231130 FAM186BQ8IYM0 893 aa15.17■□□□□ 0.02
PCDHB3-201ENST00000231130 WDR66Q8TBY9 1149 aa15.17■□□□□ 0.02
PCDHB3-201ENST00000231130 ABTB1Q969K4 478 aaPredicted RBP15.17■□□□□ 0.02
PCDHB3-201ENST00000231130 RAB3IPQ96QF0 476 aaPredicted RBP15.17■□□□□ 0.02
PCDHB3-201ENST00000231130 DDX50Q9BQ39 737 aaKnown RBP15.17■□□□□ 0.02
PCDHB3-201ENST00000231130 RUSC1Q9BVN2 902 aa15.17■□□□□ 0.02
PCDHB3-201ENST00000231130 GALNT8Q9NY28 637 aa15.17■□□□□ 0.02
PCDHB3-201ENST00000231130 ASIC3Q9UHC3 531 aa15.17■□□□□ 0.02
PCDHB3-201ENST00000231130 STXBP5LQ9Y2K9 1186 aa15.17■□□□□ 0.02
PCDHB3-201ENST00000231130 RPTORQ8N122 1335 aa15.17■□□□□ 0.02
PCDHB3-201ENST00000231130 ADAMTSL3P82987 1691 aa15.17■□□□□ 0.02
PCDHB3-201ENST00000231130 SPOPO43791 374 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms