RNA–Protein interactions for RNA: ENST00000228251.8

YBX3-201, Transcript of Y-box binding protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene YBX3, Length 1,796 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-201ENST00000228251 CCNI2Q6ZMN8 369 aaPredicted RBP20.78■□□□□ 0.92
YBX3-201ENST00000228251 TAS1R3Q7RTX0 852 aa20.78■□□□□ 0.92
YBX3-201ENST00000228251 CBWD2Q8IUF1 395 aa20.78■□□□□ 0.92
YBX3-201ENST00000228251 GLYCTKQ8IVS8 523 aa20.78■□□□□ 0.92
YBX3-201ENST00000228251 ZNF526Q8TF50 670 aaPredicted RBP20.78■□□□□ 0.92
YBX3-201ENST00000228251 U2AF1L4Q8WU68 220 aaKnown RBP20.78■□□□□ 0.92
YBX3-201ENST00000228251 MS4A14Q96JA4 679 aa20.78■□□□□ 0.92
YBX3-201ENST00000228251 ADARB2Q9NS39 739 aaKnown RBP20.78■□□□□ 0.92
YBX3-201ENST00000228251 ARHGAP28Q9P2N2 729 aa20.78■□□□□ 0.92
YBX3-201ENST00000228251 STXBP5LQ9Y2K9 1186 aa20.78■□□□□ 0.92
YBX3-201ENST00000228251 MAFBQ9Y5Q3 323 aaPredicted RBP20.78■□□□□ 0.92
YBX3-201ENST00000228251 IGKV6D-21A0A0A0MT36 114 aa20.77■□□□□ 0.92
YBX3-201ENST00000228251 H3BQF6 201 aa20.77■□□□□ 0.92
YBX3-201ENST00000228251 EIF3JO75822 258 aaKnown RBP20.77■□□□□ 0.92
YBX3-201ENST00000228251 DDNO94850 711 aaPredicted RBP20.77■□□□□ 0.92
YBX3-201ENST00000228251 MYBL2P10244 700 aa20.77■□□□□ 0.92
YBX3-201ENST00000228251 GALCP54803 685 aa20.77■□□□□ 0.92
YBX3-201ENST00000228251 CNTN2Q02246 1040 aa20.77■□□□□ 0.92
YBX3-201ENST00000228251 SNRNP35Q16560 246 aaKnown RBP20.77■□□□□ 0.92
YBX3-201ENST00000228251 HDAC7Q8WUI4 952 aa20.77■□□□□ 0.92
YBX3-201ENST00000228251 UBE2Q2Q8WVN8 375 aa20.77■□□□□ 0.92
YBX3-201ENST00000228251 MFSD14AQ96MC6 490 aa20.77■□□□□ 0.92
YBX3-201ENST00000228251 CEP89Q96ST8 783 aa20.77■□□□□ 0.92
YBX3-201ENST00000228251 LRRC1Q9BTT6 524 aa20.77■□□□□ 0.92
YBX3-201ENST00000228251 DMGDHQ9UI17 866 aaKnown RBP20.77■□□□□ 0.92
YBX3-201ENST00000228251 ZC3H4Q9UPT8 1303 aaKnown RBP20.77■□□□□ 0.92
YBX3-201ENST00000228251 CCDC169A6NNP5 214 aa20.77■□□□□ 0.91
YBX3-201ENST00000228251 KIF4AO95239 1232 aa20.77■□□□□ 0.91
YBX3-201ENST00000228251 CCDC172P0C7W6 258 aa20.77■□□□□ 0.91
YBX3-201ENST00000228251 STXBP2Q15833 593 aa20.77■□□□□ 0.91
YBX3-201ENST00000228251 CFAP221Q4G0U5 840 aa20.77■□□□□ 0.91
YBX3-201ENST00000228251 XKR3Q5GH77 459 aa20.77■□□□□ 0.91
YBX3-201ENST00000228251 MIS18BP1Q6P0N0 1132 aa20.77■□□□□ 0.91
YBX3-201ENST00000228251 TRMT1LQ7Z2T5 733 aaKnown RBP20.77■□□□□ 0.91
YBX3-201ENST00000228251 TMC2Q8TDI7 906 aa20.77■□□□□ 0.91
YBX3-201ENST00000228251 PARD3BQ8TEW8 1205 aa20.77■□□□□ 0.91
YBX3-201ENST00000228251 RBM12Q9NTZ6 932 aaKnown RBP20.77■□□□□ 0.91
YBX3-201ENST00000228251 TMEM59LQ9UK28 342 aa20.77■□□□□ 0.91
YBX3-201ENST00000228251 LRRIQ3A6PVS8 624 aaPredicted RBP20.76■□□□□ 0.91
YBX3-201ENST00000228251 IRF6O14896 467 aa20.76■□□□□ 0.91
YBX3-201ENST00000228251 TMEM253P0C7T8 217 aa20.76■□□□□ 0.91
YBX3-201ENST00000228251 OAS2P29728 719 aaKnown RBP20.76■□□□□ 0.91
YBX3-201ENST00000228251 PAFAH1B1P43034 410 aa20.76■□□□□ 0.91
YBX3-201ENST00000228251 MXI1P50539 228 aa20.76■□□□□ 0.91
YBX3-201ENST00000228251 ALDH5A1P51649 535 aaPredicted RBP20.76■□□□□ 0.91
YBX3-201ENST00000228251 FAM193AP78312 1265 aa20.76■□□□□ 0.91
YBX3-201ENST00000228251 CCDC181Q5TID7 509 aa20.76■□□□□ 0.91
YBX3-201ENST00000228251 PALB2Q86YC2 1186 aa20.76■□□□□ 0.91
YBX3-201ENST00000228251 VIPAS39Q9H9C1 493 aa20.76■□□□□ 0.91
YBX3-201ENST00000228251 ATP6V0A4Q9HBG4 840 aa20.76■□□□□ 0.91
YBX3-201ENST00000228251 SEPT9Q9UHD8 586 aaPredicted RBP20.76■□□□□ 0.91
YBX3-201ENST00000228251 PACSIN2Q9UNF0 486 aaPredicted RBP20.76■□□□□ 0.91
YBX3-201ENST00000228251 A0A0G2JLL6 359 aaPredicted RBP20.75■□□□□ 0.91
YBX3-201ENST00000228251 GOLGA8IPA6NC78 632 aa20.75■□□□□ 0.91
YBX3-201ENST00000228251 GOLGA8JA6NMD2 632 aa20.75■□□□□ 0.91
YBX3-201ENST00000228251 ADM5C9JUS6 153 aa20.75■□□□□ 0.91
YBX3-201ENST00000228251 PEX10O60683 326 aa20.75■□□□□ 0.91
YBX3-201ENST00000228251 TNFRSF8P28908 595 aa20.75■□□□□ 0.91
YBX3-201ENST00000228251 CETN1Q12798 172 aa20.75■□□□□ 0.91
YBX3-201ENST00000228251 ARHGAP44Q17R89 818 aa20.75■□□□□ 0.91
YBX3-201ENST00000228251 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.75■□□□□ 0.91
YBX3-201ENST00000228251 PRRT2Q7Z6L0 340 aaPredicted RBP20.75■□□□□ 0.91
YBX3-201ENST00000228251 AENQ8WTP8 325 aaKnown RBP20.75■□□□□ 0.91
YBX3-201ENST00000228251 UBE2TQ9NPD8 197 aaPredicted RBP20.75■□□□□ 0.91
YBX3-201ENST00000228251 FBXO40Q9UH90 709 aa20.75■□□□□ 0.91
YBX3-201ENST00000228251 ZMYND10O75800 440 aa20.74■□□□□ 0.91
YBX3-201ENST00000228251 PPATQ06203 517 aa20.74■□□□□ 0.91
YBX3-201ENST00000228251 MAP9Q49MG5 647 aa20.74■□□□□ 0.91
YBX3-201ENST00000228251 GLE1Q53GS7 698 aaKnown RBP20.74■□□□□ 0.91
YBX3-201ENST00000228251 BRDTQ58F21 947 aaPredicted RBP20.74■□□□□ 0.91
YBX3-201ENST00000228251 PROCA1Q8NCQ7 364 aaPredicted RBP20.74■□□□□ 0.91
YBX3-201ENST00000228251 SEMA4DQ92854 862 aa20.74■□□□□ 0.91
YBX3-201ENST00000228251 KREMEN1Q96MU8 473 aa20.74■□□□□ 0.91
YBX3-201ENST00000228251 GOLPH3Q9H4A6 298 aa20.74■□□□□ 0.91
YBX3-201ENST00000228251 SOWAHBA6NEL2 793 aa20.74■□□□□ 0.91
YBX3-201ENST00000228251 GARTP22102 1010 aa20.74■□□□□ 0.91
YBX3-201ENST00000228251 GPC3P51654 580 aa20.74■□□□□ 0.91
YBX3-201ENST00000228251 TCEAL1Q15170 157 aa20.74■□□□□ 0.91
YBX3-201ENST00000228251 RPS6KA1Q15418 735 aa20.74■□□□□ 0.91
YBX3-201ENST00000228251 FAM71AQ8IYT1 594 aa20.74■□□□□ 0.91
YBX3-201ENST00000228251 RFFLQ8WZ73 363 aa20.74■□□□□ 0.91
YBX3-201ENST00000228251 SAAL1Q96ER3 474 aa20.74■□□□□ 0.91
YBX3-201ENST00000228251 AGPAT1Q99943 283 aa20.74■□□□□ 0.91
YBX3-201ENST00000228251 POLR3FQ9H1D9 316 aaPredicted RBP20.74■□□□□ 0.91
YBX3-201ENST00000228251 DHX33Q9H6R0 707 aaKnown RBP20.74■□□□□ 0.91
YBX3-201ENST00000228251 PDE11AQ9HCR9 933 aa20.74■□□□□ 0.91
YBX3-201ENST00000228251 SUCLA2Q9P2R7 463 aaPredicted RBP20.74■□□□□ 0.91
YBX3-201ENST00000228251 CNMDO75829 334 aa20.73■□□□□ 0.91
YBX3-201ENST00000228251 GTF2H1P32780 548 aa20.73■□□□□ 0.91
YBX3-201ENST00000228251 CYP24A1Q07973 514 aa20.73■□□□□ 0.91
YBX3-201ENST00000228251 CYFIP1Q7L576 1253 aa20.73■□□□□ 0.91
YBX3-201ENST00000228251 ANKRD35Q8N283 1001 aa20.73■□□□□ 0.91
YBX3-201ENST00000228251 USP38Q8NB14 1042 aa20.73■□□□□ 0.91
YBX3-201ENST00000228251 SLC20A1Q8WUM9 679 aa20.73■□□□□ 0.91
YBX3-201ENST00000228251 SHC3Q92529 594 aa20.73■□□□□ 0.91
YBX3-201ENST00000228251 KAT5Q92993 513 aa20.73■□□□□ 0.91
YBX3-201ENST00000228251 PCYT2Q99447 389 aa20.73■□□□□ 0.91
YBX3-201ENST00000228251 NIFKQ9BYG3 293 aaKnown RBP20.73■□□□□ 0.91
YBX3-201ENST00000228251 SPATC1LQ9H0A9 340 aa20.73■□□□□ 0.91
YBX3-201ENST00000228251 TMEM8AQ9HCN3 771 aa20.73■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms