RNA–Protein interactions for RNA: ENST00000227524.8

PRPF19-201, Transcript of pre-mRNA processing factor 19, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF19, Length 2,157 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF19-201ENST00000227524 CHN1P15882 459 aa18.88■□□□□ 0.61
PRPF19-201ENST00000227524 MMP14P50281 582 aa18.88■□□□□ 0.61
PRPF19-201ENST00000227524 PLTPP55058 493 aa18.88■□□□□ 0.61
PRPF19-201ENST00000227524 CXCL9Q07325 125 aa18.88■□□□□ 0.61
PRPF19-201ENST00000227524 MAPK7Q13164 816 aa18.88■□□□□ 0.61
PRPF19-201ENST00000227524 RRP1BQ14684 758 aaKnown RBP18.88■□□□□ 0.61
PRPF19-201ENST00000227524 SNCBQ16143 134 aa18.88■□□□□ 0.61
PRPF19-201ENST00000227524 FBXO11Q86XK2 927 aa18.88■□□□□ 0.61
PRPF19-201ENST00000227524 PALB2Q86YC2 1186 aa18.88■□□□□ 0.61
PRPF19-201ENST00000227524 FMNL3Q8IVF7 1028 aa18.88■□□□□ 0.61
PRPF19-201ENST00000227524 CYP2W1Q8TAV3 490 aa18.88■□□□□ 0.61
PRPF19-201ENST00000227524 PIGOQ8TEQ8 1089 aa18.88■□□□□ 0.61
PRPF19-201ENST00000227524 SGSM3Q96HU1 749 aa18.88■□□□□ 0.61
PRPF19-201ENST00000227524 SEPT11Q9NVA2 429 aaKnown RBP18.88■□□□□ 0.61
PRPF19-201ENST00000227524 SLTMQ9NWH9 1034 aaKnown RBP eCLIP18.88■□□□□ 0.61
PRPF19-201ENST00000227524 TMOD4Q9NZQ9 345 aa18.88■□□□□ 0.61
PRPF19-201ENST00000227524 APEX2Q9UBZ4 518 aa18.88■□□□□ 0.61
PRPF19-201ENST00000227524 RASAL2Q9UJF2 1139 aa18.88■□□□□ 0.61
PRPF19-201ENST00000227524 CLRN2A0PK11 232 aa18.87■□□□□ 0.61
PRPF19-201ENST00000227524 NFKBIEO00221 500 aa18.87■□□□□ 0.61
PRPF19-201ENST00000227524 TRIM49P0CI25 452 aa18.87■□□□□ 0.61
PRPF19-201ENST00000227524 TRIM49CP0CI26 452 aa18.87■□□□□ 0.61
PRPF19-201ENST00000227524 TAL1P17542 331 aaPredicted RBP18.87■□□□□ 0.61
PRPF19-201ENST00000227524 PTGIRP43119 386 aa18.87■□□□□ 0.61
PRPF19-201ENST00000227524 DRG2P55039 364 aaKnown RBP18.87■□□□□ 0.61
PRPF19-201ENST00000227524 CTTNQ14247 550 aaKnown RBP18.87■□□□□ 0.61
PRPF19-201ENST00000227524 PREPLQ4J6C6 727 aaPredicted RBP18.87■□□□□ 0.61
PRPF19-201ENST00000227524 KSR1Q8IVT5 923 aa18.87■□□□□ 0.61
PRPF19-201ENST00000227524 NIM1KQ8IY84 436 aa18.87■□□□□ 0.61
PRPF19-201ENST00000227524 FBXO25Q8TCJ0 367 aa18.87■□□□□ 0.61
PRPF19-201ENST00000227524 ATXN2LQ8WWM7 1075 aaKnown RBP18.87■□□□□ 0.61
PRPF19-201ENST00000227524 ZNF317Q96PQ6 595 aaPredicted RBP18.87■□□□□ 0.61
PRPF19-201ENST00000227524 SELENOSQ9BQE4 189 aa18.87■□□□□ 0.61
PRPF19-201ENST00000227524 LOC102724159A0A0B4J2E5 919 aa18.86■□□□□ 0.61
PRPF19-201ENST00000227524 PHF2O75151 1096 aa18.86■□□□□ 0.61
PRPF19-201ENST00000227524 ATP2C2O75185 946 aa18.86■□□□□ 0.61
PRPF19-201ENST00000227524 MMEP08473 750 aa18.86■□□□□ 0.61
PRPF19-201ENST00000227524 KRT13P13646 458 aa18.86■□□□□ 0.61
PRPF19-201ENST00000227524 MMP13P45452 471 aa18.86■□□□□ 0.61
PRPF19-201ENST00000227524 CYP2J2P51589 502 aa18.86■□□□□ 0.61
PRPF19-201ENST00000227524 MYL7Q01449 175 aa18.86■□□□□ 0.61
PRPF19-201ENST00000227524 XRCC4Q13426 336 aa18.86■□□□□ 0.61
PRPF19-201ENST00000227524 KIF22Q14807 665 aa18.86■□□□□ 0.61
PRPF19-201ENST00000227524 PWP2Q15269 919 aaKnown RBP18.86■□□□□ 0.61
PRPF19-201ENST00000227524 C1orf186Q6ZWK4 172 aa18.86■□□□□ 0.61
PRPF19-201ENST00000227524 TAX1BP1Q86VP1 789 aa18.86■□□□□ 0.61
PRPF19-201ENST00000227524 KCTD17Q8N5Z5 321 aa18.86■□□□□ 0.61
PRPF19-201ENST00000227524 CCDC197Q8NCU1 140 aa18.86■□□□□ 0.61
PRPF19-201ENST00000227524 ADAM7Q9H2U9 754 aa18.86■□□□□ 0.61
PRPF19-201ENST00000227524 GRHL1Q9NZI5 618 aa18.86■□□□□ 0.61
PRPF19-201ENST00000227524 UBE4BO95155 1302 aa18.86■□□□□ 0.61
PRPF19-201ENST00000227524 SYNGAP1Q96PV0 1343 aa18.86■□□□□ 0.61
PRPF19-201ENST00000227524 CNTNAP1P78357 1384 aa18.86■□□□□ 0.61
PRPF19-201ENST00000227524 MYH11P35749 1972 aa18.86■□□□□ 0.61
PRPF19-201ENST00000227524 CCDC169A6NNP5 214 aa18.86■□□□□ 0.61
PRPF19-201ENST00000227524 TCP10L2B9ZVM9 353 aa18.86■□□□□ 0.61
PRPF19-201ENST00000227524 DNAJC8O75937 253 aaPredicted RBP18.86■□□□□ 0.61
PRPF19-201ENST00000227524 GDF11O95390 407 aa18.86■□□□□ 0.61
PRPF19-201ENST00000227524 HADHBP55084 474 aaKnown RBP18.86■□□□□ 0.61
PRPF19-201ENST00000227524 ARHGAP44Q17R89 818 aa18.86■□□□□ 0.61
PRPF19-201ENST00000227524 AADACL2Q6P093 401 aa18.86■□□□□ 0.61
PRPF19-201ENST00000227524 C18orf8Q96DM3 657 aa18.86■□□□□ 0.61
PRPF19-201ENST00000227524 CSRNP1Q96S65 589 aa18.86■□□□□ 0.61
PRPF19-201ENST00000227524 CXorf56Q9H5V9 222 aa18.86■□□□□ 0.61
PRPF19-201ENST00000227524 AZI2Q9H6S1 392 aa18.86■□□□□ 0.61
PRPF19-201ENST00000227524 PARVGQ9HBI0 331 aa18.86■□□□□ 0.61
PRPF19-201ENST00000227524 DMAC2Q9NW81 257 aa18.86■□□□□ 0.61
PRPF19-201ENST00000227524 ZNF70Q9UC06 446 aaPredicted RBP18.86■□□□□ 0.61
PRPF19-201ENST00000227524 RPTORQ8N122 1335 aa18.86■□□□□ 0.61
PRPF19-201ENST00000227524 ZNF76P36508 570 aa18.85■□□□□ 0.61
PRPF19-201ENST00000227524 PPP2R5AQ15172 486 aa18.85■□□□□ 0.61
PRPF19-201ENST00000227524 DLGAP5Q15398 846 aa18.85■□□□□ 0.61
PRPF19-201ENST00000227524 SPDYE2Q495Y8 402 aa18.85■□□□□ 0.61
PRPF19-201ENST00000227524 CCDC50Q8IVM0 306 aa18.85■□□□□ 0.61
PRPF19-201ENST00000227524 RHOT2Q8IXI1 618 aa18.85■□□□□ 0.61
PRPF19-201ENST00000227524 AGBL3Q8NEM8 1001 aa18.85■□□□□ 0.61
PRPF19-201ENST00000227524 FIZ1Q96SL8 496 aa18.85■□□□□ 0.61
PRPF19-201ENST00000227524 HSD17B14Q9BPX1 270 aa18.85■□□□□ 0.61
PRPF19-201ENST00000227524 TAOK3Q9H2K8 898 aa18.85■□□□□ 0.61
PRPF19-201ENST00000227524 TUFT1Q9NNX1 390 aa18.85■□□□□ 0.61
PRPF19-201ENST00000227524 AGPAT3Q9NRZ7 376 aa18.85■□□□□ 0.61
PRPF19-201ENST00000227524 FRMD4BQ9Y2L6 1034 aa18.85■□□□□ 0.61
PRPF19-201ENST00000227524 ALG6Q9Y672 507 aa18.85■□□□□ 0.61
PRPF19-201ENST00000227524 TLDC2A0PJX2 215 aa18.85■□□□□ 0.61
PRPF19-201ENST00000227524 CCT8L1PA6NM43 557 aa18.85■□□□□ 0.61
PRPF19-201ENST00000227524 OPLAHO14841 1288 aa18.85■□□□□ 0.61
PRPF19-201ENST00000227524 CYP3A4P08684 503 aa18.85■□□□□ 0.61
PRPF19-201ENST00000227524 HOXA13P31271 388 aaPredicted RBP18.85■□□□□ 0.61
PRPF19-201ENST00000227524 CHRNA3P32297 505 aa18.85■□□□□ 0.61
PRPF19-201ENST00000227524 C11orf63Q6NUN7 778 aa18.85■□□□□ 0.61
PRPF19-201ENST00000227524 HS2ST1Q7LGA3 356 aa18.85■□□□□ 0.61
PRPF19-201ENST00000227524 RPAINQ86UA6 219 aa18.85■□□□□ 0.61
PRPF19-201ENST00000227524 FAM228AQ86W67 206 aa18.85■□□□□ 0.61
PRPF19-201ENST00000227524 OGFOD1Q8N543 542 aa18.85■□□□□ 0.61
PRPF19-201ENST00000227524 DYDC2Q96IM9 177 aa18.85■□□□□ 0.61
PRPF19-201ENST00000227524 ZBED3Q96IU2 234 aaPredicted RBP18.85■□□□□ 0.61
PRPF19-201ENST00000227524 AGPAT1Q99943 283 aa18.85■□□□□ 0.61
PRPF19-201ENST00000227524 PPP1R1BQ9UD71 204 aaPredicted RBP18.85■□□□□ 0.61
PRPF19-201ENST00000227524 TPX2Q9ULW0 747 aaKnown RBP18.85■□□□□ 0.61
PRPF19-201ENST00000227524 MIF4GDA9UHW6 222 aaKnown RBP18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms