RNA–Protein interactions for RNA: ENST00000221922.10

CCDC9-201, Transcript of coiled-coil domain containing 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC9, Length 2,093 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-201ENST00000221922 CBWD6Q4V339 395 aa24.05■■□□□ 1.44
CCDC9-201ENST00000221922 CBWD3Q5JTY5 395 aa24.05■■□□□ 1.44
CCDC9-201ENST00000221922 CBWD5Q5RIA9 395 aa24.05■■□□□ 1.44
CCDC9-201ENST00000221922 SNRNP48Q6IEG0 339 aaKnown RBP24.05■■□□□ 1.44
CCDC9-201ENST00000221922 SLC17A8Q8NDX2 589 aa24.05■■□□□ 1.44
CCDC9-201ENST00000221922 IWS1Q96ST2 819 aa24.05■■□□□ 1.44
CCDC9-201ENST00000221922 ST6GALNAC4Q9H4F1 302 aa24.05■■□□□ 1.44
CCDC9-201ENST00000221922 WDR64B1ANS9 1081 aa24.04■■□□□ 1.44
CCDC9-201ENST00000221922 DDX3XO00571 662 aaKnown RBP eCLIP24.04■■□□□ 1.449e-9■■■□□ 15.4
CCDC9-201ENST00000221922 YWHABP31946 246 aaKnown RBP24.04■■□□□ 1.44
CCDC9-201ENST00000221922 CUL1Q13616 776 aa24.04■■□□□ 1.44
CCDC9-201ENST00000221922 DRAP1Q14919 205 aaPredicted RBP24.04■■□□□ 1.44
CCDC9-201ENST00000221922 ILDR2Q71H61 639 aa24.04■■□□□ 1.44
CCDC9-201ENST00000221922 VSIG10LQ86VR7 867 aa24.04■■□□□ 1.44
CCDC9-201ENST00000221922 KLHL7Q8IXQ5 586 aa24.04■■□□□ 1.44
CCDC9-201ENST00000221922 RDM1Q8NG50 284 aa24.04■■□□□ 1.44
CCDC9-201ENST00000221922 PPM1EQ8WY54 764 aa24.04■■□□□ 1.44
CCDC9-201ENST00000221922 VTI1AQ96AJ9 217 aa24.04■■□□□ 1.44
CCDC9-201ENST00000221922 GPRASP2Q96D09 838 aa24.04■■□□□ 1.44
CCDC9-201ENST00000221922 STXBP5LQ9Y2K9 1186 aa24.04■■□□□ 1.44
CCDC9-201ENST00000221922 LOC285556D6RIA3 1793 aa24.04■■□□□ 1.44
CCDC9-201ENST00000221922 WDR90Q96KV7 1748 aa24.04■■□□□ 1.44
CCDC9-201ENST00000221922 TRIM49P0CI25 452 aa24.04■■□□□ 1.44
CCDC9-201ENST00000221922 TRIM49CP0CI26 452 aa24.04■■□□□ 1.44
CCDC9-201ENST00000221922 NPEPPSP55786 919 aa24.04■■□□□ 1.44
CCDC9-201ENST00000221922 ERVK-9P63128 1117 aa24.04■■□□□ 1.44
CCDC9-201ENST00000221922 CETN1Q12798 172 aa24.04■■□□□ 1.44
CCDC9-201ENST00000221922 CATSPERGQ6ZRH7 1159 aa24.04■■□□□ 1.44
CCDC9-201ENST00000221922 FZD1Q9UP38 647 aa24.04■■□□□ 1.44
CCDC9-201ENST00000221922 P4HA2O15460 535 aa24.03■■□□□ 1.44
CCDC9-201ENST00000221922 CEP104O60308 925 aa24.03■■□□□ 1.44
CCDC9-201ENST00000221922 ATP9AO75110 1047 aa24.03■■□□□ 1.44
CCDC9-201ENST00000221922 ECHS1P30084 290 aa24.03■■□□□ 1.44
CCDC9-201ENST00000221922 PSMC5P62195 406 aa24.03■■□□□ 1.44
CCDC9-201ENST00000221922 PLS1Q14651 629 aa24.03■■□□□ 1.44
CCDC9-201ENST00000221922 SUPT20HL1Q3ZLR7 823 aa24.03■■□□□ 1.44
CCDC9-201ENST00000221922 MAEAQ7L5Y9 396 aa24.03■■□□□ 1.44
CCDC9-201ENST00000221922 SYCE1Q8N0S2 351 aa24.03■■□□□ 1.44
CCDC9-201ENST00000221922 SH2D3CQ8N5H7 860 aa24.03■■□□□ 1.44
CCDC9-201ENST00000221922 U2AF1L4Q8WU68 220 aaKnown RBP24.03■■□□□ 1.44
CCDC9-201ENST00000221922 BUD13Q9BRD0 619 aaKnown RBP eCLIP24.03■■□□□ 1.444e-7■■□□□ 14.1
CCDC9-201ENST00000221922 GOLPH3Q9H4A6 298 aa24.03■■□□□ 1.44
CCDC9-201ENST00000221922 TMOD4Q9NZQ9 345 aa24.03■■□□□ 1.44
CCDC9-201ENST00000221922 SUCLA2Q9P2R7 463 aaPredicted RBP24.03■■□□□ 1.44
CCDC9-201ENST00000221922 MYPNQ86TC9 1320 aa24.03■■□□□ 1.44
CCDC9-201ENST00000221922 TESPA1A2RU30 521 aaPredicted RBP24.03■■□□□ 1.44
CCDC9-201ENST00000221922 PGRMC1O00264 195 aaKnown RBP24.03■■□□□ 1.44
CCDC9-201ENST00000221922 MAPK13O15264 365 aa24.03■■□□□ 1.44
CCDC9-201ENST00000221922 MAFGO15525 162 aa24.03■■□□□ 1.44
CCDC9-201ENST00000221922 CCNE2O96020 404 aa24.03■■□□□ 1.44
CCDC9-201ENST00000221922 KCTD16Q68DU8 428 aa24.03■■□□□ 1.44
CCDC9-201ENST00000221922 RASGEF1CQ8N431 466 aa24.03■■□□□ 1.44
CCDC9-201ENST00000221922 METTL13Q8N6R0 699 aa24.03■■□□□ 1.44
CCDC9-201ENST00000221922 SLC30A5Q8TAD4 765 aa24.03■■□□□ 1.44
CCDC9-201ENST00000221922 SENP7Q9BQF6 1050 aa24.03■■□□□ 1.44
CCDC9-201ENST00000221922 ANKRD65E5RJM6 399 aa24.02■■□□□ 1.44
CCDC9-201ENST00000221922 NR3C2P08235 984 aa24.02■■□□□ 1.44
CCDC9-201ENST00000221922 HIRAP54198 1017 aaPredicted RBP24.02■■□□□ 1.44
CCDC9-201ENST00000221922 GTF2BQ00403 316 aa24.02■■□□□ 1.44
CCDC9-201ENST00000221922 TMEM132BQ14DG7 1078 aa24.02■■□□□ 1.44
CCDC9-201ENST00000221922 UGCGQ16739 394 aa24.02■■□□□ 1.44
CCDC9-201ENST00000221922 ZNF746Q6NUN9 644 aaPredicted RBP24.02■■□□□ 1.44
CCDC9-201ENST00000221922 TEX13BQ9BXU2 312 aa24.02■■□□□ 1.44
CCDC9-201ENST00000221922 ANKEF1Q9NU02 776 aa24.02■■□□□ 1.44
CCDC9-201ENST00000221922 AFG3L2Q9Y4W6 797 aa24.02■■□□□ 1.44
CCDC9-201ENST00000221922 A0A087WUV0 522 aaPredicted RBP24.01■■□□□ 1.43
CCDC9-201ENST00000221922 CCDC188H7C350 402 aa24.01■■□□□ 1.43
CCDC9-201ENST00000221922 ZEB2O60315 1214 aa24.01■■□□□ 1.43
CCDC9-201ENST00000221922 CPP00450 1065 aa24.01■■□□□ 1.43
CCDC9-201ENST00000221922 SKIDA1Q1XH10 827 aa24.01■■□□□ 1.43
CCDC9-201ENST00000221922 TTC19Q6DKK2 380 aaPredicted RBP24.01■■□□□ 1.43
CCDC9-201ENST00000221922 LRIG3Q6UXM1 1119 aa24.01■■□□□ 1.43
CCDC9-201ENST00000221922 NLRX1Q86UT6 975 aa24.01■■□□□ 1.43
CCDC9-201ENST00000221922 NSUN6Q8TEA1 469 aaKnown RBP24.01■■□□□ 1.43
CCDC9-201ENST00000221922 ATP6V1G3Q96LB4 118 aa24.01■■□□□ 1.43
CCDC9-201ENST00000221922 PDCLQ13371 301 aa24.01■■□□□ 1.43
CCDC9-201ENST00000221922 PEX26Q7Z412 305 aa24.01■■□□□ 1.43
CCDC9-201ENST00000221922 HAUS6Q7Z4H7 955 aa24.01■■□□□ 1.43
CCDC9-201ENST00000221922 DNAAF5Q86Y56 855 aa24.01■■□□□ 1.43
CCDC9-201ENST00000221922 XXYLT1Q8NBI6 393 aa24.01■■□□□ 1.43
CCDC9-201ENST00000221922 DDX55Q8NHQ9 600 aaKnown RBP eCLIP24.01■■□□□ 1.437e-13■■■□□ 19.1
CCDC9-201ENST00000221922 OLIG1Q8TAK6 271 aa24.01■■□□□ 1.43
CCDC9-201ENST00000221922 NOC2LQ9Y3T9 749 aaKnown RBP24.01■■□□□ 1.43
CCDC9-201ENST00000221922 WDR81Q562E7 1941 aa24■■□□□ 1.43
CCDC9-201ENST00000221922 HMGB1P1B2RPK0 211 aaPredicted RBP24■■□□□ 1.43
CCDC9-201ENST00000221922 SART1O43290 800 aaKnown RBP24■■□□□ 1.43
CCDC9-201ENST00000221922 VAMP7P51809 220 aa24■■□□□ 1.43
CCDC9-201ENST00000221922 SH3D19Q5HYK7 790 aa24■■□□□ 1.43
CCDC9-201ENST00000221922 RDH13Q8NBN7 331 aa24■■□□□ 1.43
CCDC9-201ENST00000221922 LNX1Q8TBB1 728 aaPredicted RBP24■■□□□ 1.43
CCDC9-201ENST00000221922 GPR88Q9GZN0 384 aa24■■□□□ 1.43
CCDC9-201ENST00000221922 NCANO14594 1321 aa24■■□□□ 1.43
CCDC9-201ENST00000221922 NCKAP1LP55160 1127 aa23.99■■□□□ 1.43
CCDC9-201ENST00000221922 NT5DC3Q86UY8 548 aa23.99■■□□□ 1.43
CCDC9-201ENST00000221922 HES6Q96HZ4 224 aa23.99■■□□□ 1.43
CCDC9-201ENST00000221922 RNPC3Q96LT9 517 aaKnown RBP23.99■■□□□ 1.43
CCDC9-201ENST00000221922 SYT11Q9BT88 431 aa23.99■■□□□ 1.43
CCDC9-201ENST00000221922 MOV10L1Q9BXT6 1211 aaKnown RBP23.99■■□□□ 1.43
CCDC9-201ENST00000221922 ACAD9Q9H845 621 aa23.99■■□□□ 1.43
CCDC9-201ENST00000221922 HOXC10Q9NYD6 342 aa23.99■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms