RNA–Protein interactions for RNA: ENST00000221899.7

CACTIN-201, Transcript of cactin, spliceosome C complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CACTIN, Length 2,797 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACTIN-201ENST00000221899 RPUSD2Q8IZ73 545 aaKnown RBP19.96■□□□□ 0.79
CACTIN-201ENST00000221899 ATXN2LQ8WWM7 1075 aaKnown RBP19.96■□□□□ 0.79
CACTIN-201ENST00000221899 BTBD6Q96KE9 485 aa19.96■□□□□ 0.79
CACTIN-201ENST00000221899 ZNF317Q96PQ6 595 aaPredicted RBP19.96■□□□□ 0.79
CACTIN-201ENST00000221899 PI4KBQ9UBF8 816 aa19.96■□□□□ 0.79
CACTIN-201ENST00000221899 BMP3P12645 472 aa19.96■□□□□ 0.79
CACTIN-201ENST00000221899 COMTP21964 271 aa19.96■□□□□ 0.79
CACTIN-201ENST00000221899 KCNJ1P48048 391 aa19.96■□□□□ 0.79
CACTIN-201ENST00000221899 ABCB5Q2M3G0 1257 aa19.96■□□□□ 0.79
CACTIN-201ENST00000221899 CCDC137Q6PK04 289 aaKnown RBP19.96■□□□□ 0.79
CACTIN-201ENST00000221899 KAT5Q92993 513 aa19.96■□□□□ 0.79
CACTIN-201ENST00000221899 SGSM3Q96HU1 749 aa19.96■□□□□ 0.79
CACTIN-201ENST00000221899 TUFT1Q9NNX1 390 aa19.96■□□□□ 0.79
CACTIN-201ENST00000221899 EMSYQ7Z589 1322 aa19.96■□□□□ 0.79
CACTIN-201ENST00000221899 TRIM37O94972 964 aa19.95■□□□□ 0.78
CACTIN-201ENST00000221899 MMP13P45452 471 aa19.95■□□□□ 0.78
CACTIN-201ENST00000221899 PPP2R5EQ16537 467 aa19.95■□□□□ 0.78
CACTIN-201ENST00000221899 UBL4BQ8N7F7 174 aa19.95■□□□□ 0.78
CACTIN-201ENST00000221899 DMAC2Q9NW81 257 aa19.95■□□□□ 0.78
CACTIN-201ENST00000221899 TPX2Q9ULW0 747 aaKnown RBP19.95■□□□□ 0.78
CACTIN-201ENST00000221899 SYNGAP1Q96PV0 1343 aa19.95■□□□□ 0.78
CACTIN-201ENST00000221899 DDX39AO00148 427 aaKnown RBP19.95■□□□□ 0.78
CACTIN-201ENST00000221899 GAS7O60861 476 aa19.95■□□□□ 0.78
CACTIN-201ENST00000221899 PSMD10O75832 226 aa19.95■□□□□ 0.78
CACTIN-201ENST00000221899 GCLMP48507 274 aa19.95■□□□□ 0.78
CACTIN-201ENST00000221899 MMP14P50281 582 aa19.95■□□□□ 0.78
CACTIN-201ENST00000221899 SLC15A2Q16348 729 aa19.95■□□□□ 0.78
CACTIN-201ENST00000221899 RHOT2Q8IXI1 618 aa19.95■□□□□ 0.78
CACTIN-201ENST00000221899 LMO3Q8TAP4 145 aa19.95■□□□□ 0.78
CACTIN-201ENST00000221899 PGM2Q96G03 612 aa19.95■□□□□ 0.78
CACTIN-201ENST00000221899 ELAC2Q9BQ52 826 aaKnown RBP19.95■□□□□ 0.78
CACTIN-201ENST00000221899 ZSWIM1Q9BR11 485 aa19.95■□□□□ 0.78
CACTIN-201ENST00000221899 INTS9Q9NV88 658 aaKnown RBP19.95■□□□□ 0.78
CACTIN-201ENST00000221899 DBR1Q9UK59 544 aaKnown RBP19.95■□□□□ 0.78
CACTIN-201ENST00000221899 GH2P01242 217 aa19.95■□□□□ 0.78
CACTIN-201ENST00000221899 VIMP08670 466 aaKnown RBP19.95■□□□□ 0.78
CACTIN-201ENST00000221899 E2F5Q15329 346 aa19.95■□□□□ 0.78
CACTIN-201ENST00000221899 TBC1D10BQ4KMP7 808 aaPredicted RBP19.95■□□□□ 0.78
CACTIN-201ENST00000221899 LACTB2Q53H82 288 aaPredicted RBP19.95■□□□□ 0.78
CACTIN-201ENST00000221899 CCDC174Q6PII3 467 aa19.95■□□□□ 0.78
CACTIN-201ENST00000221899 TMEM179Q6ZVK1 233 aa19.95■□□□□ 0.78
CACTIN-201ENST00000221899 PKD2L1Q9P0L9 805 aa19.95■□□□□ 0.78
CACTIN-201ENST00000221899 PRR12Q9ULL5 1215 aa19.95■□□□□ 0.78
CACTIN-201ENST00000221899 CCT8L1PA6NM43 557 aa19.94■□□□□ 0.78
CACTIN-201ENST00000221899 PYGMP11217 842 aa19.94■□□□□ 0.78
CACTIN-201ENST00000221899 PPP2R5AQ15172 486 aa19.94■□□□□ 0.78
CACTIN-201ENST00000221899 SPDYCQ5MJ68 293 aa19.94■□□□□ 0.78
CACTIN-201ENST00000221899 CCDC105Q8IYK2 499 aa19.94■□□□□ 0.78
CACTIN-201ENST00000221899 ZSWIM2Q8NEG5 633 aa19.94■□□□□ 0.78
CACTIN-201ENST00000221899 CENPTQ96BT3 561 aa19.94■□□□□ 0.78
CACTIN-201ENST00000221899 POP1Q99575 1024 aaKnown RBP19.94■□□□□ 0.78
CACTIN-201ENST00000221899 A1CFQ9NQ94 594 aaKnown RBP19.94■□□□□ 0.78
CACTIN-201ENST00000221899 A0A1W2PRG0 241 aa19.94■□□□□ 0.78
CACTIN-201ENST00000221899 K7ENM7 598 aa19.94■□□□□ 0.78
CACTIN-201ENST00000221899 HIP1RO75146 1068 aa19.94■□□□□ 0.78
CACTIN-201ENST00000221899 CYP3A4P08684 503 aa19.94■□□□□ 0.78
CACTIN-201ENST00000221899 BCRP11274 1271 aa19.94■□□□□ 0.78
CACTIN-201ENST00000221899 CHRNA3P32297 505 aa19.94■□□□□ 0.78
CACTIN-201ENST00000221899 PRELPP51888 382 aa19.94■□□□□ 0.78
CACTIN-201ENST00000221899 PPP3CAQ08209 521 aa19.94■□□□□ 0.78
CACTIN-201ENST00000221899 NFIL3Q16649 462 aa19.94■□□□□ 0.78
CACTIN-201ENST00000221899 SEL1L2Q5TEA6 688 aa19.94■□□□□ 0.78
CACTIN-201ENST00000221899 KDM4CQ9H3R0 1056 aa19.94■□□□□ 0.78
CACTIN-201ENST00000221899 CXorf56Q9H5V9 222 aa19.94■□□□□ 0.78
CACTIN-201ENST00000221899 POLRMTO00411 1230 aaKnown RBP19.93■□□□□ 0.78
CACTIN-201ENST00000221899 MSL1Q68DK7 614 aa19.93■□□□□ 0.78
CACTIN-201ENST00000221899 STXBP4Q6ZWJ1 553 aa19.93■□□□□ 0.78
CACTIN-201ENST00000221899 TRMT1LQ7Z2T5 733 aaKnown RBP19.93■□□□□ 0.78
CACTIN-201ENST00000221899 GMCL1Q96IK5 515 aa19.93■□□□□ 0.78
CACTIN-201ENST00000221899 PCDHB18PQ96TA0 734 aa19.93■□□□□ 0.78
CACTIN-201ENST00000221899 MTRF1LQ9UGC7 380 aaKnown RBP19.93■□□□□ 0.78
CACTIN-201ENST00000221899 GGT7Q9UJ14 662 aa19.93■□□□□ 0.78
CACTIN-201ENST00000221899 TRPC6Q9Y210 931 aa19.93■□□□□ 0.78
CACTIN-201ENST00000221899 SIPA1L1O43166 1804 aa19.93■□□□□ 0.78
CACTIN-201ENST00000221899 SGPL1O95470 568 aa19.93■□□□□ 0.78
CACTIN-201ENST00000221899 FAM133BQ5BKY9 247 aaKnown RBP19.93■□□□□ 0.78
CACTIN-201ENST00000221899 OTUD6AQ7L8S5 288 aa19.93■□□□□ 0.78
CACTIN-201ENST00000221899 ANKS4BQ8N8V4 417 aa19.93■□□□□ 0.78
CACTIN-201ENST00000221899 GMCL1P1Q8NEA9 526 aa19.93■□□□□ 0.78
CACTIN-201ENST00000221899 MGARPQ8TDB4 240 aa19.93■□□□□ 0.78
CACTIN-201ENST00000221899 SH2D3AQ9BRG2 576 aa19.93■□□□□ 0.78
CACTIN-201ENST00000221899 UNC45AQ9H3U1 944 aa19.93■□□□□ 0.78
CACTIN-201ENST00000221899 EPB41L3Q9Y2J2 1087 aaPredicted RBP19.93■□□□□ 0.78
CACTIN-201ENST00000221899 CD2APQ9Y5K6 639 aa19.93■□□□□ 0.78
CACTIN-201ENST00000221899 LTBP1Q14766 1721 aa19.92■□□□□ 0.78
CACTIN-201ENST00000221899 ARP10275 920 aa19.92■□□□□ 0.78
CACTIN-201ENST00000221899 ADRA2BP18089 450 aa19.92■□□□□ 0.78
CACTIN-201ENST00000221899 ZNF131P52739 623 aa19.92■□□□□ 0.78
CACTIN-201ENST00000221899 GPC5P78333 572 aa19.92■□□□□ 0.78
CACTIN-201ENST00000221899 LRRC14Q15048 493 aa19.92■□□□□ 0.78
CACTIN-201ENST00000221899 PPP1R7Q15435 360 aa19.92■□□□□ 0.78
CACTIN-201ENST00000221899 C11orf63Q6NUN7 778 aa19.92■□□□□ 0.78
CACTIN-201ENST00000221899 HIBCHQ6NVY1 386 aaPredicted RBP19.92■□□□□ 0.78
CACTIN-201ENST00000221899 MIF4GDA9UHW6 222 aaKnown RBP19.92■□□□□ 0.78
CACTIN-201ENST00000221899 RIPK2O43353 540 aa19.92■□□□□ 0.78
CACTIN-201ENST00000221899 CTNNA2P26232 953 aa19.92■□□□□ 0.78
CACTIN-201ENST00000221899 ECE1P42892 770 aa19.92■□□□□ 0.78
CACTIN-201ENST00000221899 DRG2P55039 364 aaKnown RBP19.92■□□□□ 0.78
CACTIN-201ENST00000221899 PPP2R5CQ13362 524 aa19.92■□□□□ 0.78
CACTIN-201ENST00000221899 XRCC4Q13426 336 aa19.92■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms