RNA–Protein interactions for RNA: ENSMUST00000095476.5

Lig4-201, Transcript of DNA ligase 4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Lig4, Length 5,028 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig4-201ENSMUST00000095476 Caln1Q9JJG7 219 aa10.87□□□□□ -0.67
Lig4-201ENSMUST00000095476 Mapk13Q9Z1B7 366 aa10.87□□□□□ -0.67
Lig4-201ENSMUST00000095476 Gm45194A0A140LJG2 572 aa10.87□□□□□ -0.67
Lig4-201ENSMUST00000095476 Cylc2B1AWN8 422 aa10.87□□□□□ -0.67
Lig4-201ENSMUST00000095476 Mroh2aD3Z750 1679 aa10.87□□□□□ -0.67
Lig4-201ENSMUST00000095476 Pcdh11xF6ZNL5 1338 aa10.87□□□□□ -0.67
Lig4-201ENSMUST00000095476 Cyp11b2P15539 500 aa10.87□□□□□ -0.67
Lig4-201ENSMUST00000095476 Epha2Q03145 977 aa10.87□□□□□ -0.67
Lig4-201ENSMUST00000095476 Ppp2r5aQ6PD03 486 aa10.87□□□□□ -0.67
Lig4-201ENSMUST00000095476 Enoph1Q8BGB7 257 aa10.87□□□□□ -0.67
Lig4-201ENSMUST00000095476 Rapgef5Q8C0Q9 814 aa10.87□□□□□ -0.67
Lig4-201ENSMUST00000095476 Appl2Q8K3G9 662 aa10.87□□□□□ -0.67
Lig4-201ENSMUST00000095476 Rnf6Q9DBU5 667 aa10.87□□□□□ -0.67
Lig4-201ENSMUST00000095476 Strn3Q9ERG2 796 aa10.87□□□□□ -0.67
Lig4-201ENSMUST00000095476 Rnf14Q9JI90 485 aa10.87□□□□□ -0.67
Lig4-201ENSMUST00000095476 Tjp2Q9Z0U1 1167 aaKnown RBP10.87□□□□□ -0.67
Lig4-201ENSMUST00000095476 Dctn3Q9Z0Y1 186 aa10.87□□□□□ -0.67
Lig4-201ENSMUST00000095476 Eif2ak1Q9Z2R9 619 aa10.87□□□□□ -0.67
Lig4-201ENSMUST00000095476 Iqcj-Schip1A0A088MLT8 559 aa10.87□□□□□ -0.67
Lig4-201ENSMUST00000095476 Slfn8B1ARD8 910 aa10.87□□□□□ -0.67
Lig4-201ENSMUST00000095476 Schip1P0DPB4 484 aa10.87□□□□□ -0.67
Lig4-201ENSMUST00000095476 Runx2Q08775 607 aa10.87□□□□□ -0.67
Lig4-201ENSMUST00000095476 Krt42Q6IFX2 452 aa10.87□□□□□ -0.67
Lig4-201ENSMUST00000095476 Wnk4Q80UE6 1222 aa10.87□□□□□ -0.67
Lig4-201ENSMUST00000095476 Olfr866Q8VFI7 312 aa10.87□□□□□ -0.67
Lig4-201ENSMUST00000095476 Kiaa2013Q91X21 634 aa10.87□□□□□ -0.67
Lig4-201ENSMUST00000095476 Cib4Q9D9N5 185 aa10.87□□□□□ -0.67
Lig4-201ENSMUST00000095476 Znf654Q9DAU9 571 aa10.87□□□□□ -0.67
Lig4-201ENSMUST00000095476 Rnf17Q99MV7 1640 aa10.87□□□□□ -0.67
Lig4-201ENSMUST00000095476 Gbp11A9YVJ5 442 aa10.86□□□□□ -0.67
Lig4-201ENSMUST00000095476 Rad51bO35719 350 aa10.86□□□□□ -0.67
Lig4-201ENSMUST00000095476 Acot6Q32Q92 419 aa10.86□□□□□ -0.67
Lig4-201ENSMUST00000095476 Wdr36Q3TAQ9 899 aaKnown RBP10.86□□□□□ -0.67
Lig4-201ENSMUST00000095476 Krt26Q3TRJ4 462 aa10.86□□□□□ -0.67
Lig4-201ENSMUST00000095476 E330034G19RikQ3UWX6 351 aa10.86□□□□□ -0.67
Lig4-201ENSMUST00000095476 ScinQ60604 715 aa10.86□□□□□ -0.67
Lig4-201ENSMUST00000095476 Kif11Q6P9P6 1052 aa10.86□□□□□ -0.67
Lig4-201ENSMUST00000095476 Ankrd13aQ80UP5 588 aa10.86□□□□□ -0.67
Lig4-201ENSMUST00000095476 Tarsl2Q8BLY2 790 aa10.86□□□□□ -0.67
Lig4-201ENSMUST00000095476 Sesn3Q9CYP7 492 aa10.86□□□□□ -0.67
Lig4-201ENSMUST00000095476 Katnal2Q9D3R6 539 aa10.86□□□□□ -0.67
Lig4-201ENSMUST00000095476 Cpb1B2RS76 415 aa10.86□□□□□ -0.67
Lig4-201ENSMUST00000095476 Cyp4f40G3UW81 524 aa10.86□□□□□ -0.67
Lig4-201ENSMUST00000095476 Sesn2P58043 480 aa10.86□□□□□ -0.67
Lig4-201ENSMUST00000095476 Bsdc1Q80Y55 427 aa10.86□□□□□ -0.67
Lig4-201ENSMUST00000095476 4932411N23RikQ8C0S0 470 aa10.86□□□□□ -0.67
Lig4-201ENSMUST00000095476 Alx1Q8C8B0 326 aa10.86□□□□□ -0.67
Lig4-201ENSMUST00000095476 Terb2Q9D494 218 aa10.86□□□□□ -0.67
Lig4-201ENSMUST00000095476 Dmap1Q9JI44 468 aa10.86□□□□□ -0.67
Lig4-201ENSMUST00000095476 Gm3182K7N6T8 263 aa10.86□□□□□ -0.67
Lig4-201ENSMUST00000095476 Msr1P30204 458 aaKnown RBP10.86□□□□□ -0.67
Lig4-201ENSMUST00000095476 Grin1P35438 938 aa10.86□□□□□ -0.67
Lig4-201ENSMUST00000095476 Kpna2P52293 529 aaKnown RBP10.86□□□□□ -0.67
Lig4-201ENSMUST00000095476 RelaQ04207 549 aa10.86□□□□□ -0.67
Lig4-201ENSMUST00000095476 Mindy1Q76LS9 468 aa10.86□□□□□ -0.67
Lig4-201ENSMUST00000095476 Tas2r109Q7M707 316 aa10.86□□□□□ -0.67
Lig4-201ENSMUST00000095476 Letm2Q7TNU7 480 aa10.86□□□□□ -0.67
Lig4-201ENSMUST00000095476 Q8BGD0 127 aa10.86□□□□□ -0.67
Lig4-201ENSMUST00000095476 Nop9Q8BMC4 636 aaKnown RBP10.86□□□□□ -0.67
Lig4-201ENSMUST00000095476 Actl9Q8CG27 415 aa10.86□□□□□ -0.67
Lig4-201ENSMUST00000095476 Prpsap2Q8R574 369 aa10.86□□□□□ -0.67
Lig4-201ENSMUST00000095476 Dnajc28Q8VCE1 385 aa10.86□□□□□ -0.67
Lig4-201ENSMUST00000095476 RtcbQ99LF4 505 aaKnown RBP10.86□□□□□ -0.67
Lig4-201ENSMUST00000095476 Smok2bQ9QYZ3 484 aa10.86□□□□□ -0.67
Lig4-201ENSMUST00000095476 Smok2aQ9QYZ6 504 aa10.86□□□□□ -0.67
Lig4-201ENSMUST00000095476 Gm8257E9Q8R3 264 aa10.86□□□□□ -0.67
Lig4-201ENSMUST00000095476 E2f6O54917 272 aa10.86□□□□□ -0.67
Lig4-201ENSMUST00000095476 Adcy7P51829 1099 aa10.86□□□□□ -0.67
Lig4-201ENSMUST00000095476 Idi1P58044 227 aa10.86□□□□□ -0.67
Lig4-201ENSMUST00000095476 Adrbk2Q3UYH7 688 aa10.86□□□□□ -0.67
Lig4-201ENSMUST00000095476 SmtnQ921U8 923 aa10.86□□□□□ -0.67
Lig4-201ENSMUST00000095476 Trmt112Q9DCG9 125 aa10.86□□□□□ -0.67
Lig4-201ENSMUST00000095476 Ttc30a2A2AKQ8 664 aa10.85□□□□□ -0.67
Lig4-201ENSMUST00000095476 Kcnb2A6H8H5 907 aa10.85□□□□□ -0.67
Lig4-201ENSMUST00000095476 Serpina3iD3Z450 408 aa10.85□□□□□ -0.67
Lig4-201ENSMUST00000095476 C1qbpO35658 278 aa10.85□□□□□ -0.67
Lig4-201ENSMUST00000095476 LtbrP50284 415 aa10.85□□□□□ -0.67
Lig4-201ENSMUST00000095476 Dynll1P63168 89 aa10.85□□□□□ -0.67
Lig4-201ENSMUST00000095476 Cyp11b1Q3TG86 501 aa10.85□□□□□ -0.67
Lig4-201ENSMUST00000095476 Armcx5Q3UZB0 606 aa10.85□□□□□ -0.67
Lig4-201ENSMUST00000095476 Capn11Q6J756 714 aa10.85□□□□□ -0.67
Lig4-201ENSMUST00000095476 Cdc26Q99JP4 85 aa10.85□□□□□ -0.67
Lig4-201ENSMUST00000095476 Hps4Q99KG7 671 aa10.85□□□□□ -0.67
Lig4-201ENSMUST00000095476 Ddah1Q9CWS0 285 aa10.85□□□□□ -0.67
Lig4-201ENSMUST00000095476 Myo1hQ9D6A1 958 aa10.85□□□□□ -0.67
Lig4-201ENSMUST00000095476 Sh3tc1G3X9F6 1346 aa10.85□□□□□ -0.67
Lig4-201ENSMUST00000095476 Itsn2Q9Z0R6 1659 aa10.85□□□□□ -0.67
Lig4-201ENSMUST00000095476 Kif1bQ60575 1816 aaKnown RBP10.85□□□□□ -0.67
Lig4-201ENSMUST00000095476 Olfr552E9Q545 317 aa10.85□□□□□ -0.67
Lig4-201ENSMUST00000095476 Foxm1O08696 760 aa10.85□□□□□ -0.67
Lig4-201ENSMUST00000095476 Prl3b1P09586 222 aa10.85□□□□□ -0.67
Lig4-201ENSMUST00000095476 Hspa2P17156 633 aa10.85□□□□□ -0.67
Lig4-201ENSMUST00000095476 Impdh2P24547 514 aa10.85□□□□□ -0.67
Lig4-201ENSMUST00000095476 Man1a2P39098 641 aa10.85□□□□□ -0.67
Lig4-201ENSMUST00000095476 Tmprss15P97435 1069 aa10.85□□□□□ -0.67
Lig4-201ENSMUST00000095476 Ankrd27Q3UMR0 1048 aa10.85□□□□□ -0.67
Lig4-201ENSMUST00000095476 Fam183bQ5NC57 135 aa10.85□□□□□ -0.67
Lig4-201ENSMUST00000095476 Rhot1Q8BG51 631 aa10.85□□□□□ -0.67
Lig4-201ENSMUST00000095476 Sgsm3Q8VCZ6 750 aa10.85□□□□□ -0.67
Lig4-201ENSMUST00000095476 CemipQ8BI06 1361 aa10.85□□□□□ -0.67
Retrieved 100 of 22,080 RNA–protein pairs in 19 ms