RNA–Protein interactions for RNA: ENSMUST00000053871.4

Ckap4-201, Transcript of Cytoskeleton-associated protein 4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ckap4, Length 3,089 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ckap4-201ENSMUST00000053871 Pja2Q80U04 707 aa17.26■□□□□ 0.35
Ckap4-201ENSMUST00000053871 Slc20a2Q80UP8 656 aa17.26■□□□□ 0.35
Ckap4-201ENSMUST00000053871 Pnma1Q8C1C8 353 aa17.26■□□□□ 0.35
Ckap4-201ENSMUST00000053871 Zfp446Q8C9M8 523 aa17.26■□□□□ 0.35
Ckap4-201ENSMUST00000053871 PpatQ8CIH9 517 aa17.26■□□□□ 0.35
Ckap4-201ENSMUST00000053871 Atp2a1Q8R429 994 aa17.26■□□□□ 0.35
Ckap4-201ENSMUST00000053871 Rbm31yQ9D3U4 565 aa17.26■□□□□ 0.35
Ckap4-201ENSMUST00000053871 Rtn3Q9ES97 964 aa17.26■□□□□ 0.35
Ckap4-201ENSMUST00000053871 Magea4F2Z493 315 aa17.26■□□□□ 0.35
Ckap4-201ENSMUST00000053871 4933406M09RikG3XA12 479 aa17.26■□□□□ 0.35
Ckap4-201ENSMUST00000053871 Mt-CybP00158 381 aa17.26■□□□□ 0.35
Ckap4-201ENSMUST00000053871 Cyp2c67Q569X9 491 aa17.26■□□□□ 0.35
Ckap4-201ENSMUST00000053871 Ccdc92bQ5SUE3 299 aa17.26■□□□□ 0.35
Ckap4-201ENSMUST00000053871 Msantd2Q6NZR2 559 aa17.26■□□□□ 0.35
Ckap4-201ENSMUST00000053871 Cog1Q9Z160 980 aa17.26■□□□□ 0.35
Ckap4-201ENSMUST00000053871 Zfp266E9Q2S7 604 aa17.25■□□□□ 0.35
Ckap4-201ENSMUST00000053871 Tex35Q14BK3 207 aa17.25■□□□□ 0.35
Ckap4-201ENSMUST00000053871 Rnaseh2bQ80ZV0 308 aa17.25■□□□□ 0.35
Ckap4-201ENSMUST00000053871 Als2cr12Q8BVM7 383 aa17.25■□□□□ 0.35
Ckap4-201ENSMUST00000053871 PhykplQ8R1K4 467 aa17.25■□□□□ 0.35
Ckap4-201ENSMUST00000053871 Rasgef1cQ9D300 466 aa17.25■□□□□ 0.35
Ckap4-201ENSMUST00000053871 PrameQ9D4Z5 464 aa17.25■□□□□ 0.35
Ckap4-201ENSMUST00000053871 Tll2Q9WVM6 1012 aa17.25■□□□□ 0.35
Ckap4-201ENSMUST00000053871 Rasgrp1Q9Z1S3 795 aa17.25■□□□□ 0.35
Ckap4-201ENSMUST00000053871 Fem1bQ9Z2G0 627 aa17.25■□□□□ 0.35
Ckap4-201ENSMUST00000053871 Fam171a1A2ATK9 892 aa17.25■□□□□ 0.35
Ckap4-201ENSMUST00000053871 Serpina1aP07758 413 aa17.25■□□□□ 0.35
Ckap4-201ENSMUST00000053871 Serpina1bP22599 413 aa17.25■□□□□ 0.35
Ckap4-201ENSMUST00000053871 Xrcc5P27641 732 aa17.25■□□□□ 0.35
Ckap4-201ENSMUST00000053871 Serpina1cQ00896 412 aa17.25■□□□□ 0.35
Ckap4-201ENSMUST00000053871 Serpina1dQ00897 413 aa17.25■□□□□ 0.35
Ckap4-201ENSMUST00000053871 Zfp953Q3UPV7 304 aa17.25■□□□□ 0.35
Ckap4-201ENSMUST00000053871 Slc9c1Q6UJY2 1175 aa17.25■□□□□ 0.35
Ckap4-201ENSMUST00000053871 TbckQ8BM85 762 aa17.25■□□□□ 0.35
Ckap4-201ENSMUST00000053871 Calhm6Q8C9E8 313 aa17.25■□□□□ 0.35
Ckap4-201ENSMUST00000053871 Mipol1Q9D9F8 279 aa17.25■□□□□ 0.35
Ckap4-201ENSMUST00000053871 Mageb2A2AHM0 380 aa17.24■□□□□ 0.35
Ckap4-201ENSMUST00000053871 Axin2O88566 840 aa17.24■□□□□ 0.35
Ckap4-201ENSMUST00000053871 Pde4aO89084 844 aa17.24■□□□□ 0.35
Ckap4-201ENSMUST00000053871 SpoplQ2M2N2 392 aa17.24■□□□□ 0.35
Ckap4-201ENSMUST00000053871 Frmd8Q3UFK8 466 aa17.24■□□□□ 0.35
Ckap4-201ENSMUST00000053871 OgdhQ60597 1023 aaKnown RBP17.24■□□□□ 0.35
Ckap4-201ENSMUST00000053871 Wdr44Q6NVE8 915 aa17.24■□□□□ 0.35
Ckap4-201ENSMUST00000053871 Raver2Q7TPD6 673 aa17.24■□□□□ 0.35
Ckap4-201ENSMUST00000053871 E330017A01RikQ8BU47 192 aa17.24■□□□□ 0.35
Ckap4-201ENSMUST00000053871 Fam118bQ8C569 351 aa17.24■□□□□ 0.35
Ckap4-201ENSMUST00000053871 Msantd4Q91YU3 345 aa17.24■□□□□ 0.35
Ckap4-201ENSMUST00000053871 Sppl3Q9CUS9 384 aa17.24■□□□□ 0.35
Ckap4-201ENSMUST00000053871 Llcfc1Q9D9P8 108 aa17.24■□□□□ 0.35
Ckap4-201ENSMUST00000053871 Krt71Q9R0H5 524 aa17.24■□□□□ 0.35
Ckap4-201ENSMUST00000053871 Dock2Q8C3J5 1828 aa17.24■□□□□ 0.35
Ckap4-201ENSMUST00000053871 Mical3Q8CJ19 1993 aa17.24■□□□□ 0.35
Ckap4-201ENSMUST00000053871 Gm4297D3YWB7 211 aa17.24■□□□□ 0.35
Ckap4-201ENSMUST00000053871 Barx2O08686 283 aa17.24■□□□□ 0.35
Ckap4-201ENSMUST00000053871 Miga1Q4QQM5 600 aa17.24■□□□□ 0.35
Ckap4-201ENSMUST00000053871 AlcamQ61490 583 aa17.24■□□□□ 0.35
Ckap4-201ENSMUST00000053871 B4galnt4Q766D5 1034 aa17.24■□□□□ 0.35
Ckap4-201ENSMUST00000053871 TwistnbQ78WZ7 330 aaKnown RBP17.24■□□□□ 0.35
Ckap4-201ENSMUST00000053871 Cplx4Q80WM3 160 aa17.24■□□□□ 0.35
Ckap4-201ENSMUST00000053871 Asb11Q9CQ31 323 aa17.24■□□□□ 0.35
Ckap4-201ENSMUST00000053871 Cep19Q9CQA8 163 aa17.24■□□□□ 0.35
Ckap4-201ENSMUST00000053871 Trap1Q9CQN1 706 aaKnown RBP17.24■□□□□ 0.35
Ckap4-201ENSMUST00000053871 Nudt12Q9DCN1 462 aa17.24■□□□□ 0.35
Ckap4-201ENSMUST00000053871 AdssP46664 456 aa17.24■□□□□ 0.35
Ckap4-201ENSMUST00000053871 Cyfip1Q7TMB8 1253 aa17.24■□□□□ 0.35
Ckap4-201ENSMUST00000053871 Aipl1Q924K1 328 aa17.24■□□□□ 0.35
Ckap4-201ENSMUST00000053871 Sucla2Q9Z2I9 463 aa17.24■□□□□ 0.35
Ckap4-201ENSMUST00000053871 Ttc13A0A1L1SSC7 844 aa17.23■□□□□ 0.35
Ckap4-201ENSMUST00000053871 Gm11549A0A286YD83 63 aa17.23■□□□□ 0.35
Ckap4-201ENSMUST00000053871 Prkg1P0C605 671 aa17.23■□□□□ 0.35
Ckap4-201ENSMUST00000053871 Wnt7bP28047 349 aa17.23■□□□□ 0.35
Ckap4-201ENSMUST00000053871 Rnf113a2Q14B01 337 aa17.23■□□□□ 0.35
Ckap4-201ENSMUST00000053871 Palb2Q3U0P1 1104 aa17.23■□□□□ 0.35
Ckap4-201ENSMUST00000053871 Cd37Q61470 281 aa17.23■□□□□ 0.35
Ckap4-201ENSMUST00000053871 Bicd1Q8BR07 835 aa17.23■□□□□ 0.35
Ckap4-201ENSMUST00000053871 Spns2Q91VM4 549 aa17.23■□□□□ 0.35
Ckap4-201ENSMUST00000053871 Zkscan3Q91VW9 553 aa17.23■□□□□ 0.35
Ckap4-201ENSMUST00000053871 Ebag9Q9D0V7 213 aa17.23■□□□□ 0.35
Ckap4-201ENSMUST00000053871 Serpina9Q9D7D2 418 aa17.23■□□□□ 0.35
Ckap4-201ENSMUST00000053871 Nup50Q9JIH2 466 aaKnown RBP17.23■□□□□ 0.35
Ckap4-201ENSMUST00000053871 Slc3a2P10852 526 aaKnown RBP17.23■□□□□ 0.35
Ckap4-201ENSMUST00000053871 LipeP54310 759 aa17.23■□□□□ 0.35
Ckap4-201ENSMUST00000053871 Ndufaf2Q59J78 168 aa17.23■□□□□ 0.35
Ckap4-201ENSMUST00000053871 AdigQ8R400 80 aa17.23■□□□□ 0.35
Ckap4-201ENSMUST00000053871 Psma8Q9CWH6 250 aa17.23■□□□□ 0.35
Ckap4-201ENSMUST00000053871 Gkap1Q9JMB0 366 aa17.23■□□□□ 0.35
Ckap4-201ENSMUST00000053871 Gyg1Q9R062 333 aa17.23■□□□□ 0.35
Ckap4-201ENSMUST00000053871 March10E9PX79 788 aa17.22■□□□□ 0.35
Ckap4-201ENSMUST00000053871 PtenO08586 403 aa17.22■□□□□ 0.35
Ckap4-201ENSMUST00000053871 Krt19P19001 403 aa17.22■□□□□ 0.35
Ckap4-201ENSMUST00000053871 Adad1Q5SUE7 619 aa17.22■□□□□ 0.35
Ckap4-201ENSMUST00000053871 Ccdc15Q8C9M2 810 aa17.22■□□□□ 0.35
Ckap4-201ENSMUST00000053871 P3h4Q8K2B0 443 aa17.22■□□□□ 0.35
Ckap4-201ENSMUST00000053871 Rhobtb2Q91V93 728 aa17.22■□□□□ 0.35
Ckap4-201ENSMUST00000053871 Actn2Q9JI91 894 aa17.22■□□□□ 0.35
Ckap4-201ENSMUST00000053871 rp9P97762 213 aa17.22■□□□□ 0.35
Ckap4-201ENSMUST00000053871 4933427I04RikQ3V053 235 aa17.22■□□□□ 0.35
Ckap4-201ENSMUST00000053871 Acbd5Q5XG73 508 aa17.22■□□□□ 0.35
Ckap4-201ENSMUST00000053871 HarsQ61035 509 aa17.22■□□□□ 0.35
Ckap4-201ENSMUST00000053871 Sorbs1Q62417 1290 aa17.22■□□□□ 0.35
Retrieved 100 of 22,080 RNA–protein pairs in 24.2 ms