RNA–Protein interactions for RNA: ENSMUST00000002708.4

Shh-201, Transcript of Sonic hedgehog protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shh, Length 2,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shh-201ENSMUST00000002708 Rccd1Q8BTU7 377 aa17.69■□□□□ 0.42
Shh-201ENSMUST00000002708 Ptrh1Q8BW00 204 aa17.69■□□□□ 0.42
Shh-201ENSMUST00000002708 Znf428Q8C1M2 176 aa17.69■□□□□ 0.42
Shh-201ENSMUST00000002708 Scgb2b20Q9JI02 112 aa17.69■□□□□ 0.42
Shh-201ENSMUST00000002708 Atp2c2A7L9Z8 944 aa17.69■□□□□ 0.42
Shh-201ENSMUST00000002708 Cyth3O08967 399 aa17.69■□□□□ 0.42
Shh-201ENSMUST00000002708 Lmnb1P14733 588 aaKnown RBP17.69■□□□□ 0.42
Shh-201ENSMUST00000002708 Cep104Q80V31 926 aa17.69■□□□□ 0.42
Shh-201ENSMUST00000002708 Lrrc14Q8VC16 493 aa17.69■□□□□ 0.42
Shh-201ENSMUST00000002708 Reep2Q8VCD6 254 aa17.69■□□□□ 0.42
Shh-201ENSMUST00000002708 Ciapin1Q8WTY4 309 aa17.69■□□□□ 0.42
Shh-201ENSMUST00000002708 Kcnh7Q9ER47 1195 aa17.69■□□□□ 0.42
Shh-201ENSMUST00000002708 Hsf3D0VYS2 492 aa17.68■□□□□ 0.42
Shh-201ENSMUST00000002708 Gm8994E9PV04 411 aaKnown RBP17.68■□□□□ 0.42
Shh-201ENSMUST00000002708 Eddm13E9Q7F5 164 aa17.68■□□□□ 0.42
Shh-201ENSMUST00000002708 Gm3127E9Q9P5 263 aa17.68■□□□□ 0.42
Shh-201ENSMUST00000002708 Gm3453K7N724 263 aa17.68■□□□□ 0.42
Shh-201ENSMUST00000002708 Creb1Q01147 341 aaKnown RBP17.68■□□□□ 0.42
Shh-201ENSMUST00000002708 Trmt1Q3TX08 663 aa17.68■□□□□ 0.42
Shh-201ENSMUST00000002708 Dab2ipQ3UHC7 1189 aa17.68■□□□□ 0.42
Shh-201ENSMUST00000002708 Pick1Q62083 416 aa17.68■□□□□ 0.42
Shh-201ENSMUST00000002708 Gga2Q6P5E6 603 aa17.68■□□□□ 0.42
Shh-201ENSMUST00000002708 Unc5bQ8K1S3 945 aa17.68■□□□□ 0.42
Shh-201ENSMUST00000002708 Q8VDP2 222 aa17.68■□□□□ 0.42
Shh-201ENSMUST00000002708 Grtp1Q9D3N8 359 aa17.68■□□□□ 0.42
Shh-201ENSMUST00000002708 Tlr9Q9EQU3 1032 aa17.68■□□□□ 0.42
Shh-201ENSMUST00000002708 GcP21614 476 aa17.68■□□□□ 0.42
Shh-201ENSMUST00000002708 Lmntd2Q0VET5 664 aa17.68■□□□□ 0.42
Shh-201ENSMUST00000002708 Pbxip1Q3TVI8 727 aa17.68■□□□□ 0.42
Shh-201ENSMUST00000002708 Krt12Q64291 487 aa17.68■□□□□ 0.42
Shh-201ENSMUST00000002708 Lrig3Q6P1C6 1117 aa17.68■□□□□ 0.42
Shh-201ENSMUST00000002708 Kcnt1Q6ZPR4 1224 aa17.68■□□□□ 0.42
Shh-201ENSMUST00000002708 Ano5Q75UR0 904 aa17.68■□□□□ 0.42
Shh-201ENSMUST00000002708 Elmo3Q8BYZ7 720 aa17.68■□□□□ 0.42
Shh-201ENSMUST00000002708 Gramd4Q8CB44 633 aa17.68■□□□□ 0.42
Shh-201ENSMUST00000002708 Fam20aQ8CID3 541 aa17.68■□□□□ 0.42
Shh-201ENSMUST00000002708 Hdac9Q99N13 588 aa17.68■□□□□ 0.42
Shh-201ENSMUST00000002708 Mettl16Q9CQG2 553 aaKnown RBP17.68■□□□□ 0.42
Shh-201ENSMUST00000002708 GrapQ9CX99 217 aa17.68■□□□□ 0.42
Shh-201ENSMUST00000002708 4930544D05RikJ3QK56 214 aa17.67■□□□□ 0.42
Shh-201ENSMUST00000002708 Stk10O55098 966 aa17.67■□□□□ 0.42
Shh-201ENSMUST00000002708 Gm2163Q6PCY5 473 aa17.67■□□□□ 0.42
Shh-201ENSMUST00000002708 Zfp341Q6PGC9 846 aa17.67■□□□□ 0.42
Shh-201ENSMUST00000002708 Btnl9Q8BJE2 536 aa17.67■□□□□ 0.42
Shh-201ENSMUST00000002708 Pkn3Q8K045 878 aa17.67■□□□□ 0.42
Shh-201ENSMUST00000002708 Ctage5Q8R311 779 aa17.67■□□□□ 0.42
Shh-201ENSMUST00000002708 Pcdhb3Q91XZ7 784 aa17.67■□□□□ 0.42
Shh-201ENSMUST00000002708 SncbQ91ZZ3 133 aa17.67■□□□□ 0.42
Shh-201ENSMUST00000002708 Tjp3Q9QXY1 905 aa17.67■□□□□ 0.42
Shh-201ENSMUST00000002708 Apba1B2RUJ5 842 aa17.67■□□□□ 0.42
Shh-201ENSMUST00000002708 Cyp11b2P15539 500 aa17.67■□□□□ 0.42
Shh-201ENSMUST00000002708 GssP51855 474 aa17.67■□□□□ 0.42
Shh-201ENSMUST00000002708 Atp5c1Q91VR2 298 aaKnown RBP17.67■□□□□ 0.42
Shh-201ENSMUST00000002708 Grhl1Q921D9 618 aa17.67■□□□□ 0.42
Shh-201ENSMUST00000002708 Spdl1Q923A2 608 aa17.67■□□□□ 0.42
Shh-201ENSMUST00000002708 IscuQ9D7P6 168 aa17.67■□□□□ 0.42
Shh-201ENSMUST00000002708 CsadQ9DBE0 493 aa17.67■□□□□ 0.42
Shh-201ENSMUST00000002708 Lactbl1S4R213 581 aa17.67■□□□□ 0.42
Shh-201ENSMUST00000002708 Ddr1Q03146 911 aa17.67■□□□□ 0.42
Shh-201ENSMUST00000002708 Tfcp2l1Q3UNW5 479 aa17.67■□□□□ 0.42
Shh-201ENSMUST00000002708 Oca2Q62052 833 aa17.67■□□□□ 0.42
Shh-201ENSMUST00000002708 Sh3d21Q7TSG5 549 aa17.67■□□□□ 0.42
Shh-201ENSMUST00000002708 Ppfia2Q8BSS9 1257 aa17.67■□□□□ 0.42
Shh-201ENSMUST00000002708 Camkk2Q8C078 588 aa17.67■□□□□ 0.42
Shh-201ENSMUST00000002708 Mrgprx1Q8CIP3 322 aa17.67■□□□□ 0.42
Shh-201ENSMUST00000002708 1700109H08RikQ9D9C0 210 aa17.67■□□□□ 0.42
Shh-201ENSMUST00000002708 Oip5A2AQ14 241 aa17.66■□□□□ 0.42
Shh-201ENSMUST00000002708 Gm10110D3Z5M2 615 aa17.66■□□□□ 0.42
Shh-201ENSMUST00000002708 Gm45837F7D3W5 961 aa17.66■□□□□ 0.42
Shh-201ENSMUST00000002708 Serpinb8O08800 374 aaKnown RBP17.66■□□□□ 0.42
Shh-201ENSMUST00000002708 Serpina1aP07758 413 aa17.66■□□□□ 0.42
Shh-201ENSMUST00000002708 Serpina1cQ00896 412 aa17.66■□□□□ 0.42
Shh-201ENSMUST00000002708 Serpina1dQ00897 413 aa17.66■□□□□ 0.42
Shh-201ENSMUST00000002708 Nt5c2Q3V1L4 560 aa17.66■□□□□ 0.42
Shh-201ENSMUST00000002708 P4ha1Q60715 534 aa17.66■□□□□ 0.42
Shh-201ENSMUST00000002708 Rassf6Q80UQ2 353 aa17.66■□□□□ 0.42
Shh-201ENSMUST00000002708 Snx14Q8BHY8 964 aa17.66■□□□□ 0.42
Shh-201ENSMUST00000002708 Spns2Q91VM4 549 aa17.66■□□□□ 0.42
Shh-201ENSMUST00000002708 Pde2aQ922S4 916 aa17.66■□□□□ 0.42
Shh-201ENSMUST00000002708 Cfap57Q9D180 1249 aa17.66■□□□□ 0.42
Shh-201ENSMUST00000002708 Rtn3Q9ES97 964 aa17.66■□□□□ 0.42
Shh-201ENSMUST00000002708 Vmn2r77L7N2B7 854 aa17.66■□□□□ 0.42
Shh-201ENSMUST00000002708 Shox2P70390 331 aa17.66■□□□□ 0.42
Shh-201ENSMUST00000002708 Vps41Q5KU39 853 aa17.66■□□□□ 0.42
Shh-201ENSMUST00000002708 Nr3c2Q8VII8 978 aa17.66■□□□□ 0.42
Shh-201ENSMUST00000002708 Sbf2E9PXF8 1872 aa17.65■□□□□ 0.42
Shh-201ENSMUST00000002708 Atrnl1Q6A051 1378 aa17.65■□□□□ 0.42
Shh-201ENSMUST00000002708 Magea4F2Z493 315 aa17.65■□□□□ 0.42
Shh-201ENSMUST00000002708 Q3TTJ4 293 aa17.65■□□□□ 0.42
Shh-201ENSMUST00000002708 Lgr6Q3UVD5 967 aa17.65■□□□□ 0.42
Shh-201ENSMUST00000002708 Rapgef5Q8C0Q9 814 aa17.65■□□□□ 0.42
Shh-201ENSMUST00000002708 Gle1Q8R322 699 aa17.65■□□□□ 0.42
Shh-201ENSMUST00000002708 Arhgef25Q9CWR0 618 aa17.65■□□□□ 0.42
Shh-201ENSMUST00000002708 Lman1Q9D0F3 517 aa17.65■□□□□ 0.42
Shh-201ENSMUST00000002708 NkapQ9D0F4 415 aaKnown RBP17.65■□□□□ 0.42
Shh-201ENSMUST00000002708 Prl2b1Q9DAZ2 228 aa17.65■□□□□ 0.42
Shh-201ENSMUST00000002708 Nup50Q9JIH2 466 aaKnown RBP17.65■□□□□ 0.42
Shh-201ENSMUST00000002708 Slc6a16A0A1L1SR47 742 aa17.65■□□□□ 0.42
Shh-201ENSMUST00000002708 Tbc1d16A2ABG4 766 aa17.65■□□□□ 0.42
Shh-201ENSMUST00000002708 Gm15448F6PZL4 682 aa17.65■□□□□ 0.42
Retrieved 100 of 22,080 RNA–protein pairs in 71.8 ms