RNA–Protein interactions for RNA: YKL213C

DOA1, Transcript of WD repeat protein required for ubiquitin-mediated protein degradation, yeast

Gene DOA1, Length 2,148 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
DOA1	YKL213C	RPL27A	P0C2H6	136 aa	Known RBP	4.56	□□□□□ -1.68
DOA1	YKL213C	RPL27B	P0C2H7	136 aa	Known RBP	4.56	□□□□□ -1.68
DOA1	YKL213C	TOP3	P13099	656 aa		4.56	□□□□□ -1.68
DOA1	YKL213C	PRO1	P32264	428 aa		4.56	□□□□□ -1.68
DOA1	YKL213C	SEC17	P32602	292 aa		4.56	□□□□□ -1.68
DOA1	YKL213C	MNS1	P32906	549 aa		4.56	□□□□□ -1.68
DOA1	YKL213C	NAT2	P37293	288 aa		4.56	□□□□□ -1.68
DOA1	YKL213C	MNN9	P39107	395 aa	Known RBP	4.56	□□□□□ -1.68
DOA1	YKL213C	RMD6	P39975	231 aa		4.56	□□□□□ -1.68
DOA1	YKL213C	AVT6	P40074	448 aa		4.56	□□□□□ -1.68
DOA1	YKL213C	MAM33	P40513	266 aa		4.56	□□□□□ -1.68
DOA1	YKL213C	CFD1	P40558	293 aa		4.56	□□□□□ -1.68
DOA1	YKL213C	HSV2	P50079	448 aa	Predicted RBP	4.56	□□□□□ -1.68
DOA1	YKL213C	YGR017W	P53210	297 aa		4.56	□□□□□ -1.68
DOA1	YKL213C	IMO32	P53219	342 aa		4.56	□□□□□ -1.68
DOA1	YKL213C	YGR066C	P53242	292 aa		4.56	□□□□□ -1.68
DOA1	YKL213C	TMA20	P89886	181 aa	Predicted RBP	4.56	□□□□□ -1.68
DOA1	YKL213C	ARL3	Q02804	198 aa		4.56	□□□□□ -1.68
DOA1	YKL213C	YDR249C	Q03787	373 aa		4.56	□□□□□ -1.68
DOA1	YKL213C	RQC1	Q05468	723 aa	Known RBP	4.56	□□□□□ -1.68
DOA1	YKL213C	RRP45	Q05636	305 aa	Known RBP	4.56	□□□□□ -1.68
DOA1	YKL213C	CRR1	Q05790	422 aa		4.56	□□□□□ -1.68
DOA1	YKL213C	SFM1	Q12314	213 aa		4.56	□□□□□ -1.68
DOA1	YKL213C	YPR064W	Q12492	139 aa		4.56	□□□□□ -1.68
DOA1	YKL213C	HFA1	P32874	2273 aa		4.56	□□□□□ -1.68
DOA1	YKL213C	THP2	O13539	261 aa	Known RBP	4.55	□□□□□ -1.68
DOA1	YKL213C	YPR096C	O13587	100 aa		4.55	□□□□□ -1.68
DOA1	YKL213C	ZWF1	P11412	505 aa	Known RBP	4.55	□□□□□ -1.68
DOA1	YKL213C	CDC34	P14682	295 aa		4.55	□□□□□ -1.68
DOA1	YKL213C	ARE1	P25628	610 aa		4.55	□□□□□ -1.68
DOA1	YKL213C	SRB5	P32585	307 aa		4.55	□□□□□ -1.68
DOA1	YKL213C	CAT2	P32796	670 aa	Known RBP	4.55	□□□□□ -1.68
DOA1	YKL213C	MET28	P40573	187 aa		4.55	□□□□□ -1.68
DOA1	YKL213C	GTT1	P40582	234 aa		4.55	□□□□□ -1.68
DOA1	YKL213C	YGR201C	P42936	225 aa		4.55	□□□□□ -1.68
DOA1	YKL213C	ERP6	P53198	216 aa		4.55	□□□□□ -1.68
DOA1	YKL213C	HED1	Q03937	162 aa		4.55	□□□□□ -1.68
DOA1	YKL213C	VID22	Q05934	901 aa		4.55	□□□□□ -1.68
DOA1	YKL213C	DIC1	Q06143	298 aa		4.55	□□□□□ -1.68
DOA1	YKL213C	ASA1	Q06822	443 aa		4.55	□□□□□ -1.68
DOA1	YKL213C	XYL2	Q07993	356 aa		4.55	□□□□□ -1.68
DOA1	YKL213C	FRE3	Q08905	711 aa		4.55	□□□□□ -1.68
DOA1	YKL213C	ARO3	P14843	370 aa	Known RBP	4.55	□□□□□ -1.68
DOA1	YKL213C	CBS2	P14905	389 aa		4.55	□□□□□ -1.68
DOA1	YKL213C	PEX3	P28795	441 aa		4.55	□□□□□ -1.68
DOA1	YKL213C	NTH1	P32356	751 aa		4.55	□□□□□ -1.68
DOA1	YKL213C	SEF1	P34228	1148 aa		4.55	□□□□□ -1.68
DOA1	YKL213C	YBR184W	P38299	523 aa		4.55	□□□□□ -1.68
DOA1	YKL213C	SMK1	P41808	388 aa		4.55	□□□□□ -1.68
DOA1	YKL213C	IRC5	P43610	853 aa		4.55	□□□□□ -1.68
DOA1	YKL213C	ROG1	P53118	685 aa		4.55	□□□□□ -1.68
DOA1	YKL213C	DBP6	P53734	629 aa	Known RBP	4.55	□□□□□ -1.68
DOA1	YKL213C	COS1	P53822	381 aa		4.55	□□□□□ -1.68
DOA1	YKL213C	TIM44	Q01852	431 aa		4.55	□□□□□ -1.68
DOA1	YKL213C	YLR030W	Q07967	263 aa		4.55	□□□□□ -1.68
DOA1	YKL213C	YOR214C	Q12282	236 aa		4.55	□□□□□ -1.68
DOA1	YKL213C	GLO4	Q12320	285 aa		4.55	□□□□□ -1.68
DOA1	YKL213C	IRA1	P18963	3092 aa		4.54	□□□□□ -1.68
DOA1	YKL213C	STE7	P06784	515 aa		4.54	□□□□□ -1.68
DOA1	YKL213C	ALG7	P07286	448 aa		4.54	□□□□□ -1.68
DOA1	YKL213C	URA6	P15700	204 aa		4.54	□□□□□ -1.68
DOA1	YKL213C	MGR1	P25573	417 aa		4.54	□□□□□ -1.68
DOA1	YKL213C	YCL049C	P25577	312 aa		4.54	□□□□□ -1.68
DOA1	YKL213C	CLG1	P35190	452 aa		4.54	□□□□□ -1.68
DOA1	YKL213C	BNA4	P38169	460 aa		4.54	□□□□□ -1.68
DOA1	YKL213C	FMP23	P38231	175 aa		4.54	□□□□□ -1.68
DOA1	YKL213C	FET3	P38993	636 aa		4.54	□□□□□ -1.68
DOA1	YKL213C	GIP2	P40036	548 aa		4.54	□□□□□ -1.68
DOA1	YKL213C	FMP33	P46998	180 aa		4.54	□□□□□ -1.68
DOA1	YKL213C	YJL016W	P47072	561 aa		4.54	□□□□□ -1.68
DOA1	YKL213C	GET1	P53192	235 aa		4.54	□□□□□ -1.68
DOA1	YKL213C	MTQ1	P53944	314 aa		4.54	□□□□□ -1.68
DOA1	YKL213C	SAE3	P89114	91 aa		4.54	□□□□□ -1.68
DOA1	YKL213C	SED5	Q01590	340 aa		4.54	□□□□□ -1.68
DOA1	YKL213C	YPL080C	Q02826	108 aa		4.54	□□□□□ -1.68
DOA1	YKL213C	YOL131W	Q08270	108 aa		4.54	□□□□□ -1.68
DOA1	YKL213C	BSC6	Q08280	497 aa		4.54	□□□□□ -1.68
DOA1	YKL213C	YOL159C	Q08300	171 aa		4.54	□□□□□ -1.68
DOA1	YKL213C	MMT2	Q08970	484 aa		4.54	□□□□□ -1.68
DOA1	YKL213C	TRP4	P07285	380 aa	Predicted RBP	4.54	□□□□□ -1.68
DOA1	YKL213C	PRE7	P23724	241 aa	Known RBP	4.54	□□□□□ -1.68
DOA1	YKL213C	FAA1	P30624	700 aa	Known RBP	4.54	□□□□□ -1.68
DOA1	YKL213C	SIP1	P32578	815 aa		4.54	□□□□□ -1.68
DOA1	YKL213C	YKL070W	P36087	169 aa		4.54	□□□□□ -1.68
DOA1	YKL213C	OMA1	P36163	345 aa		4.54	□□□□□ -1.68
DOA1	YKL213C	FAD1	P38913	306 aa		4.54	□□□□□ -1.68
DOA1	YKL213C	YER121W	P40076	114 aa		4.54	□□□□□ -1.68
DOA1	YKL213C	YAR1	P46683	200 aa		4.54	□□□□□ -1.68
DOA1	YKL213C	PMT4	P46971	762 aa		4.54	□□□□□ -1.68
DOA1	YKL213C	HOC1	P47124	396 aa		4.54	□□□□□ -1.68
DOA1	YKL213C	BUD17	P53727	317 aa		4.54	□□□□□ -1.68
DOA1	YKL213C	CAF40	P53829	373 aa		4.54	□□□□□ -1.68
DOA1	YKL213C	YNL033W	P53964	284 aa		4.54	□□□□□ -1.68
DOA1	YKL213C	YNL019C	P53975	284 aa		4.54	□□□□□ -1.68
DOA1	YKL213C	MSC1	Q03104	513 aa		4.54	□□□□□ -1.68
DOA1	YKL213C	APC4	Q04601	652 aa		4.54	□□□□□ -1.68
DOA1	YKL213C	NEJ1	Q06148	342 aa		4.54	□□□□□ -1.68
DOA1	YKL213C	CTS2	Q06350	511 aa		4.54	□□□□□ -1.68
DOA1	YKL213C	PUN1	Q06991	263 aa		4.54	□□□□□ -1.68
DOA1	YKL213C	YLR040C	Q07988	224 aa		4.54	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 27.8 ms