RNA–Protein interactions for RNA: YDL185W

VMA1, Transcript of Subunit A of the V1 peripheral membrane domain of V-ATPase, yeast

Gene VMA1, Length 3,216 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VMA1	YDL185W	YJR112W-A	Q3E743	109 aa		3.74	□□□□□ -1.81
VMA1	YDL185W	YPR014C	Q6B0W2	109 aa		3.74	□□□□□ -1.81
VMA1	YDL185W	CDC28	P00546	298 aa	Known RBP	3.74	□□□□□ -1.81
VMA1	YDL185W	MIR1	P23641	311 aa	Known RBP	3.74	□□□□□ -1.81
VMA1	YDL185W	MRP17	P28778	131 aa		3.74	□□□□□ -1.81
VMA1	YDL185W	SUR1	P33300	382 aa		3.74	□□□□□ -1.81
VMA1	YDL185W	SEF1	P34228	1148 aa		3.74	□□□□□ -1.81
VMA1	YDL185W	RTC2	P38279	296 aa		3.74	□□□□□ -1.81
VMA1	YDL185W	GND1	P38720	489 aa	Known RBP	3.74	□□□□□ -1.81
VMA1	YDL185W	HMF1	P40037	129 aa	Known RBP	3.74	□□□□□ -1.81
VMA1	YDL185W	ART5	P53244	586 aa	Known RBP	3.74	□□□□□ -1.81
VMA1	YDL185W	GPI15	P53961	229 aa		3.74	□□□□□ -1.81
VMA1	YDL185W	MSC2	Q03455	724 aa		3.74	□□□□□ -1.81
VMA1	YDL185W	YMR253C	Q04835	414 aa		3.74	□□□□□ -1.81
VMA1	YDL185W	HOF1	Q05080	669 aa		3.74	□□□□□ -1.81
VMA1	YDL185W	VID22	Q05934	901 aa		3.74	□□□□□ -1.81
VMA1	YDL185W	YPR127W	Q06494	345 aa		3.74	□□□□□ -1.81
VMA1	YDL185W	YLR040C	Q07988	224 aa		3.74	□□□□□ -1.81
VMA1	YDL185W	RAS1	P01119	309 aa		3.74	□□□□□ -1.81
VMA1	YDL185W	AI3	P03877	415 aa		3.74	□□□□□ -1.81
VMA1	YDL185W	MSF1	P08425	469 aa		3.74	□□□□□ -1.81
VMA1	YDL185W	RSA4	P25382	515 aa	Known RBP	3.74	□□□□□ -1.81
VMA1	YDL185W	AHC2	P25649	128 aa		3.74	□□□□□ -1.81
VMA1	YDL185W	RPD3	P32561	433 aa		3.74	□□□□□ -1.81
VMA1	YDL185W	SNC2	P33328	115 aa		3.74	□□□□□ -1.81
VMA1	YDL185W	THI80	P35202	319 aa		3.74	□□□□□ -1.81
VMA1	YDL185W	DOA1	P36037	715 aa		3.74	□□□□□ -1.81
VMA1	YDL185W	FLR1	P38124	548 aa		3.74	□□□□□ -1.81
VMA1	YDL185W	EHT1	P38295	451 aa		3.74	□□□□□ -1.81
VMA1	YDL185W	PTC7	P38797	343 aa		3.74	□□□□□ -1.81
VMA1	YDL185W	PHB2	P50085	310 aa		3.74	□□□□□ -1.81
VMA1	YDL185W	SOL1	P50278	321 aa		3.74	□□□□□ -1.81
VMA1	YDL185W	EXG2	P52911	562 aa		3.74	□□□□□ -1.81
VMA1	YDL185W	VBA4	Q04602	768 aa	Known RBP	3.74	□□□□□ -1.81
VMA1	YDL185W	DAT1	P13483	248 aa	Known RBP	3.73	□□□□□ -1.81
VMA1	YDL185W	PDA1	P16387	420 aa	Known RBP	3.73	□□□□□ -1.81
VMA1	YDL185W	PET9	P18239	318 aa	Known RBP	3.73	□□□□□ -1.81
VMA1	YDL185W	ATS1	P31386	333 aa		3.73	□□□□□ -1.81
VMA1	YDL185W	MTC2	P34246	357 aa		3.73	□□□□□ -1.81
VMA1	YDL185W	MRPL28	P36527	147 aa		3.73	□□□□□ -1.81
VMA1	YDL185W	APE3	P37302	537 aa	Known RBP	3.73	□□□□□ -1.81
VMA1	YDL185W	REG2	P38232	338 aa		3.73	□□□□□ -1.81
VMA1	YDL185W	RPS26A	P39938	119 aa	Known RBP	3.73	□□□□□ -1.81
VMA1	YDL185W	RPS26B	P39939	119 aa	Known RBP	3.73	□□□□□ -1.81
VMA1	YDL185W	YER010C	P40011	234 aa		3.73	□□□□□ -1.81
VMA1	YDL185W	SLS1	P42900	643 aa		3.73	□□□□□ -1.81
VMA1	YDL185W	YGL117W	P53133	265 aa		3.73	□□□□□ -1.81
VMA1	YDL185W	FRE4	P53746	719 aa		3.73	□□□□□ -1.81
VMA1	YDL185W	YKR011C	Q02209	353 aa		3.73	□□□□□ -1.81
VMA1	YDL185W	EST3	Q03096	181 aa		3.73	□□□□□ -1.81
VMA1	YDL185W	CRF1	Q04930	467 aa		3.73	□□□□□ -1.81
VMA1	YDL185W	GRX8	Q05926	109 aa		3.73	□□□□□ -1.81
VMA1	YDL185W	YFT2	Q06676	274 aa		3.73	□□□□□ -1.81
VMA1	YDL185W	BDS1	Q08347	646 aa		3.73	□□□□□ -1.81
VMA1	YDL185W	ERP3	Q12403	225 aa		3.73	□□□□□ -1.81
VMA1	YDL185W	LPX1	Q12405	387 aa	Known RBP	3.73	□□□□□ -1.81
VMA1	YDL185W	TRP4	P07285	380 aa	Predicted RBP	3.73	□□□□□ -1.81
VMA1	YDL185W	MTF1	P14908	341 aa	Known RBP	3.73	□□□□□ -1.81
VMA1	YDL185W	SIS1	P25294	352 aa	Known RBP	3.73	□□□□□ -1.81
VMA1	YDL185W	LOT5	P34234	306 aa		3.73	□□□□□ -1.81
VMA1	YDL185W	TSA1	P34760	196 aa	Known RBP	3.73	□□□□□ -1.81
VMA1	YDL185W	MAC1	P35192	417 aa		3.73	□□□□□ -1.81
VMA1	YDL185W	MTH1	P35198	433 aa		3.73	□□□□□ -1.81
VMA1	YDL185W	RMA1	P36001	430 aa	Known RBP	3.73	□□□□□ -1.81
VMA1	YDL185W	SHE2	P36068	246 aa	Known RBP RIP-Chip data	3.73	□□□□□ -1.81	not detected
VMA1	YDL185W	YBR284W	P38150	797 aa		3.73	□□□□□ -1.81
VMA1	YDL185W	BUL1	P48524	976 aa		3.73	□□□□□ -1.81
VMA1	YDL185W	TIM21	P53220	239 aa		3.73	□□□□□ -1.81
VMA1	YDL185W	RPN4	Q03465	531 aa		3.73	□□□□□ -1.81
VMA1	YDL185W	OST6	Q03723	332 aa		3.73	□□□□□ -1.81
VMA1	YDL185W	CUE4	Q04201	117 aa	Predicted RBP	3.73	□□□□□ -1.81
VMA1	YDL185W	YMR252C	Q04814	134 aa		3.73	□□□□□ -1.81
VMA1	YDL185W	ELP6	Q04868	273 aa		3.73	□□□□□ -1.81
VMA1	YDL185W	YOR114W	Q12219	294 aa		3.73	□□□□□ -1.81
VMA1	YDL185W	ATP4	P05626	244 aa		3.72	□□□□□ -1.81
VMA1	YDL185W	HAP2	P06774	265 aa		3.72	□□□□□ -1.81
VMA1	YDL185W	MATALPHA1	P0CY06	175 aa		3.72	□□□□□ -1.81
VMA1	YDL185W	HMLALPHA1	P0CY07	175 aa		3.72	□□□□□ -1.81
VMA1	YDL185W	SEC12	P11655	471 aa		3.72	□□□□□ -1.81
VMA1	YDL185W	FUN14	P18411	198 aa		3.72	□□□□□ -1.81
VMA1	YDL185W	TKL1	P23254	680 aa	Known RBP	3.72	□□□□□ -1.81
VMA1	YDL185W	EXG1	P23776	448 aa	Known RBP	3.72	□□□□□ -1.81
VMA1	YDL185W	MRPL15	P36523	253 aa		3.72	□□□□□ -1.81
VMA1	YDL185W	MAL32	P38158	584 aa		3.72	□□□□□ -1.81
VMA1	YDL185W	YMR262W	P38430	313 aa		3.72	□□□□□ -1.81
VMA1	YDL185W	ARO9	P38840	513 aa	Predicted RBP	3.72	□□□□□ -1.81
VMA1	YDL185W	AXL2	P38928	823 aa		3.72	□□□□□ -1.81
VMA1	YDL185W	TES1	P41903	349 aa	Known RBP	3.72	□□□□□ -1.81
VMA1	YDL185W	PET130	P47065	347 aa		3.72	□□□□□ -1.81
VMA1	YDL185W	COX16	P47081	118 aa		3.72	□□□□□ -1.81
VMA1	YDL185W	YJR149W	P47177	404 aa		3.72	□□□□□ -1.81
VMA1	YDL185W	MAL12	P53341	584 aa		3.72	□□□□□ -1.81
VMA1	YDL185W	YNR065C	P53751	1116 aa		3.72	□□□□□ -1.81
VMA1	YDL185W	BSP1	Q06604	576 aa		3.72	□□□□□ -1.81
VMA1	YDL185W	YDR056C	Q12025	205 aa		3.72	□□□□□ -1.81
VMA1	YDL185W	TMA7	Q3E764	64 aa	Known RBP	3.72	□□□□□ -1.81
VMA1	YDL185W	YPR096C	O13587	100 aa		3.72	□□□□□ -1.81
VMA1	YDL185W	HOP1	P20050	605 aa		3.72	□□□□□ -1.81
VMA1	YDL185W	EPT1	P22140	391 aa		3.72	□□□□□ -1.81
VMA1	YDL185W	KRR1	P25586	316 aa	Predicted RBP	3.72	□□□□□ -1.81

Retrieved 100 of 5,963 RNA–protein pairs in 14.7 ms