RNA–Protein interactions for RNA: ENST00000642021.1

PHGDH-233, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,794 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-233ENST00000642021 ZNF131P52739 623 aa14.96□□□□□ -0.01
PHGDH-233ENST00000642021 PLTPP55058 493 aa14.96□□□□□ -0.01
PHGDH-233ENST00000642021 BTNL9Q6UXG8 535 aa14.96□□□□□ -0.01
PHGDH-233ENST00000642021 HS2ST1Q7LGA3 356 aa14.96□□□□□ -0.01
PHGDH-233ENST00000642021 EGFL6Q8IUX8 553 aa14.96□□□□□ -0.01
PHGDH-233ENST00000642021 CCDC13Q8IYE1 715 aa14.96□□□□□ -0.01
PHGDH-233ENST00000642021 DNAJC5Q9H3Z4 198 aa14.96□□□□□ -0.01
PHGDH-233ENST00000642021 PNMA2Q9UL42 364 aa14.96□□□□□ -0.01
PHGDH-233ENST00000642021 FRMD4BQ9Y2L6 1034 aa14.96□□□□□ -0.01
PHGDH-233ENST00000642021 DAAM1Q9Y4D1 1078 aa14.96□□□□□ -0.01
PHGDH-233ENST00000642021 ANKRD62A6NC57 917 aa14.96□□□□□ -0.01
PHGDH-233ENST00000642021 ARP10275 920 aa14.96□□□□□ -0.01
PHGDH-233ENST00000642021 VCAM1P19320 739 aa14.96□□□□□ -0.01
PHGDH-233ENST00000642021 MNAT1P51948 309 aa14.96□□□□□ -0.01
PHGDH-233ENST00000642021 ZDHHC24Q6UX98 284 aa14.96□□□□□ -0.01
PHGDH-233ENST00000642021 MAEAQ7L5Y9 396 aa14.96□□□□□ -0.01
PHGDH-233ENST00000642021 FBXO25Q8TCJ0 367 aa14.96□□□□□ -0.01
PHGDH-233ENST00000642021 RNF25Q96BH1 459 aaPredicted RBP14.96□□□□□ -0.01
PHGDH-233ENST00000642021 C18orf8Q96DM3 657 aa14.96□□□□□ -0.01
PHGDH-233ENST00000642021 SEC16BQ96JE7 1060 aa14.96□□□□□ -0.01
PHGDH-233ENST00000642021 GGA2Q9UJY4 613 aa14.96□□□□□ -0.01
PHGDH-233ENST00000642021 UBR3Q6ZT12 1888 aa14.96□□□□□ -0.02
PHGDH-233ENST00000642021 DNM1LO00429 736 aa14.96□□□□□ -0.02
PHGDH-233ENST00000642021 EXOC3O60645 756 aa14.96□□□□□ -0.02
PHGDH-233ENST00000642021 MYL7Q01449 175 aa14.96□□□□□ -0.02
PHGDH-233ENST00000642021 IFFO1Q0D2I5 559 aa14.96□□□□□ -0.02
PHGDH-233ENST00000642021 BFSP1Q12934 665 aa14.96□□□□□ -0.02
PHGDH-233ENST00000642021 PPP2R5CQ13362 524 aa14.96□□□□□ -0.02
PHGDH-233ENST00000642021 JAMLQ86YT9 394 aa14.96□□□□□ -0.02
PHGDH-233ENST00000642021 DAW1Q8N136 415 aa14.96□□□□□ -0.02
PHGDH-233ENST00000642021 ZSWIM2Q8NEG5 633 aa14.96□□□□□ -0.02
PHGDH-233ENST00000642021 SLC5A5Q92911 643 aa14.96□□□□□ -0.02
PHGDH-233ENST00000642021 TLCD1Q96CP7 247 aa14.96□□□□□ -0.02
PHGDH-233ENST00000642021 PSMD1Q99460 953 aa14.96□□□□□ -0.02
PHGDH-233ENST00000642021 PCIF1Q9H4Z3 704 aa14.96□□□□□ -0.02
PHGDH-233ENST00000642021 TDRD3Q9H7E2 651 aaKnown RBP14.96□□□□□ -0.02
PHGDH-233ENST00000642021 VCPKMTQ9H867 229 aa14.96□□□□□ -0.02
PHGDH-233ENST00000642021 KIAA0391O15091 583 aaKnown RBP14.95□□□□□ -0.02
PHGDH-233ENST00000642021 PAEPP09466 180 aa14.95□□□□□ -0.02
PHGDH-233ENST00000642021 KIF22Q14807 665 aa14.95□□□□□ -0.02
PHGDH-233ENST00000642021 ZNF746Q6NUN9 644 aaPredicted RBP14.95□□□□□ -0.02
PHGDH-233ENST00000642021 CPNE8Q86YQ8 564 aa14.95□□□□□ -0.02
PHGDH-233ENST00000642021 ARHGEF19Q8IW93 802 aa14.95□□□□□ -0.02
PHGDH-233ENST00000642021 CABS1Q96KC9 395 aa14.95□□□□□ -0.02
PHGDH-233ENST00000642021 AGPAT1Q99943 283 aa14.95□□□□□ -0.02
PHGDH-233ENST00000642021 RAB17Q9H0T7 212 aa14.95□□□□□ -0.02
PHGDH-233ENST00000642021 UNC45AQ9H3U1 944 aa14.95□□□□□ -0.02
PHGDH-233ENST00000642021 GOPCQ9HD26 462 aa14.95□□□□□ -0.02
PHGDH-233ENST00000642021 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.95□□□□□ -0.021e-6■■■■■ 90
PHGDH-233ENST00000642021 THSD7AQ9UPZ6 1657 aa14.95□□□□□ -0.02
PHGDH-233ENST00000642021 GAS7O60861 476 aa14.95□□□□□ -0.02
PHGDH-233ENST00000642021 FTLP02792 175 aaPredicted RBP14.95□□□□□ -0.02
PHGDH-233ENST00000642021 PRELPP51888 382 aa14.95□□□□□ -0.02
PHGDH-233ENST00000642021 MAPK7Q13164 816 aa14.95□□□□□ -0.02
PHGDH-233ENST00000642021 DACT2Q5SW24 774 aa14.95□□□□□ -0.02
PHGDH-233ENST00000642021 CCDC174Q6PII3 467 aa14.95□□□□□ -0.02
PHGDH-233ENST00000642021 PODNQ7Z5L7 613 aa14.95□□□□□ -0.02
PHGDH-233ENST00000642021 ACER1Q8TDN7 264 aa14.95□□□□□ -0.02
PHGDH-233ENST00000642021 KAT5Q92993 513 aa14.95□□□□□ -0.02
PHGDH-233ENST00000642021 GJD4Q96KN9 370 aaPredicted RBP14.95□□□□□ -0.02
PHGDH-233ENST00000642021 CEP89Q96ST8 783 aa14.95□□□□□ -0.02
PHGDH-233ENST00000642021 UBE2TQ9NPD8 197 aaPredicted RBP14.95□□□□□ -0.02
PHGDH-233ENST00000642021 ACP6Q9NPH0 428 aa14.95□□□□□ -0.02
PHGDH-233ENST00000642021 C5orf60A6NFR6 353 aa14.94□□□□□ -0.02
PHGDH-233ENST00000642021 PTGIRP43119 386 aa14.94□□□□□ -0.02
PHGDH-233ENST00000642021 PPP3CAQ08209 521 aa14.94□□□□□ -0.02
PHGDH-233ENST00000642021 PPP2R5AQ15172 486 aa14.94□□□□□ -0.02
PHGDH-233ENST00000642021 SWT1Q5T5J6 900 aaKnown RBP14.94□□□□□ -0.02
PHGDH-233ENST00000642021 PRELID2Q8N945 189 aa14.94□□□□□ -0.02
PHGDH-233ENST00000642021 STRA6Q9BX79 667 aa14.94□□□□□ -0.02
PHGDH-233ENST00000642021 GRHL1Q9NZI5 618 aa14.94□□□□□ -0.02
PHGDH-233ENST00000642021 DIS3Q9Y2L1 958 aaKnown RBP14.94□□□□□ -0.02
PHGDH-233ENST00000642021 TMEM110-MUSTN1A8MSY1 372 aa14.94□□□□□ -0.02
PHGDH-233ENST00000642021 NPR1P16066 1061 aa14.94□□□□□ -0.02
PHGDH-233ENST00000642021 TTC27Q6P3X3 843 aa14.94□□□□□ -0.02
PHGDH-233ENST00000642021 UHMK1Q8TAS1 419 aaKnown RBP14.94□□□□□ -0.02
PHGDH-233ENST00000642021 TATDN2Q93075 761 aa14.94□□□□□ -0.02
PHGDH-233ENST00000642021 NACC1Q96RE7 527 aa14.94□□□□□ -0.02
PHGDH-233ENST00000642021 CTTNBP2NLQ9P2B4 639 aa14.94□□□□□ -0.02
PHGDH-233ENST00000642021 EMSYQ7Z589 1322 aa14.93□□□□□ -0.02
PHGDH-233ENST00000642021 TCRBV7S2A1N4TA0A589 114 aa14.93□□□□□ -0.02
PHGDH-233ENST00000642021 TLDC2A0PJX2 215 aa14.93□□□□□ -0.02
PHGDH-233ENST00000642021 TOM1O60784 492 aa14.93□□□□□ -0.02
PHGDH-233ENST00000642021 HIP1RO75146 1068 aa14.93□□□□□ -0.02
PHGDH-233ENST00000642021 KRT13P13646 458 aa14.93□□□□□ -0.02
PHGDH-233ENST00000642021 PMS2P54278 862 aa14.93□□□□□ -0.02
PHGDH-233ENST00000642021 SF3A3Q12874 501 aaKnown RBP eCLIP14.93□□□□□ -0.021e-9■■■■□ 22.2
PHGDH-233ENST00000642021 SLC29A2Q14542 456 aa14.93□□□□□ -0.02
PHGDH-233ENST00000642021 CEP55Q53EZ4 464 aa14.93□□□□□ -0.02
PHGDH-233ENST00000642021 RBM26Q5T8P6 1007 aaKnown RBP14.93□□□□□ -0.02
PHGDH-233ENST00000642021 SYCP3Q8IZU3 236 aa14.93□□□□□ -0.02
PHGDH-233ENST00000642021 KCTD17Q8N5Z5 321 aa14.93□□□□□ -0.02
PHGDH-233ENST00000642021 PCDHB18PQ96TA0 734 aa14.93□□□□□ -0.02
PHGDH-233ENST00000642021 PABPC3Q9H361 631 aaKnown RBP14.93□□□□□ -0.02
PHGDH-233ENST00000642021 SEMA4AQ9H3S1 761 aa14.93□□□□□ -0.02
PHGDH-233ENST00000642021 SEL1LQ9UBV2 794 aa14.93□□□□□ -0.02
PHGDH-233ENST00000642021 RPTORQ8N122 1335 aa14.93□□□□□ -0.02
PHGDH-233ENST00000642021 SMIM23A6NLE4 172 aa14.93□□□□□ -0.02
PHGDH-233ENST00000642021 RASSF9O75901 435 aa14.93□□□□□ -0.02
PHGDH-233ENST00000642021 DRD4P21917 467 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms