RNA–Protein interactions for RNA: ENST00000641573.1

PHGDH-221, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,180 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-221ENST00000641573 CYP2C19P33261 490 aa14.39□□□□□ -0.11
PHGDH-221ENST00000641573 NPTX2P47972 431 aa14.39□□□□□ -0.11
PHGDH-221ENST00000641573 SMTNP53814 917 aa14.39□□□□□ -0.11
PHGDH-221ENST00000641573 TNFAIP2Q03169 654 aa14.39□□□□□ -0.11
PHGDH-221ENST00000641573 DMP1Q13316 513 aaPredicted RBP14.39□□□□□ -0.11
PHGDH-221ENST00000641573 ADAM9Q13443 819 aa14.39□□□□□ -0.11
PHGDH-221ENST00000641573 MFSD14CQ5VZR4 134 aa14.39□□□□□ -0.11
PHGDH-221ENST00000641573 HAUS6Q7Z4H7 955 aa14.39□□□□□ -0.11
PHGDH-221ENST00000641573 SPIRE2Q8WWL2 714 aa14.39□□□□□ -0.11
PHGDH-221ENST00000641573 SLC7A3Q8WY07 619 aa14.39□□□□□ -0.11
PHGDH-221ENST00000641573 BSNDQ8WZ55 320 aa14.39□□□□□ -0.11
PHGDH-221ENST00000641573 FAM122AQ96E09 287 aa14.39□□□□□ -0.11
PHGDH-221ENST00000641573 ACCSQ96QU6 501 aa14.39□□□□□ -0.11
PHGDH-221ENST00000641573 TTYH1Q9H313 450 aaPredicted RBP14.39□□□□□ -0.11
PHGDH-221ENST00000641573 C17orf75Q9HAS0 396 aa14.39□□□□□ -0.11
PHGDH-221ENST00000641573 PRDM5Q9NQX1 630 aaPredicted RBP14.39□□□□□ -0.11
PHGDH-221ENST00000641573 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.39□□□□□ -0.11
PHGDH-221ENST00000641573 TMEM265A0A087WTH1 108 aa14.38□□□□□ -0.11
PHGDH-221ENST00000641573 LGALS16A8MUM7 142 aa14.38□□□□□ -0.11
PHGDH-221ENST00000641573 ADCY6O43306 1168 aa14.38□□□□□ -0.11
PHGDH-221ENST00000641573 HBP1O60381 514 aa14.38□□□□□ -0.11
PHGDH-221ENST00000641573 MAFO75444 373 aaPredicted RBP14.38□□□□□ -0.11
PHGDH-221ENST00000641573 NR3C1P04150 777 aa14.38□□□□□ -0.11
PHGDH-221ENST00000641573 NR2F2P24468 414 aa14.38□□□□□ -0.11
PHGDH-221ENST00000641573 RPL13P26373 211 aaKnown RBP14.38□□□□□ -0.11
PHGDH-221ENST00000641573 ARL2P36404 184 aa14.38□□□□□ -0.11
PHGDH-221ENST00000641573 PLA2G5P39877 138 aa14.38□□□□□ -0.11
PHGDH-221ENST00000641573 PBX1P40424 430 aa14.38□□□□□ -0.11
PHGDH-221ENST00000641573 GSDMDP57764 484 aa14.38□□□□□ -0.11
PHGDH-221ENST00000641573 GTF2BQ00403 316 aa14.38□□□□□ -0.11
PHGDH-221ENST00000641573 NFIL3Q16649 462 aa14.38□□□□□ -0.11
PHGDH-221ENST00000641573 CCDC40Q4G0X9 1142 aa14.38□□□□□ -0.11
PHGDH-221ENST00000641573 C9orf50Q5SZB4 431 aa14.38□□□□□ -0.11
PHGDH-221ENST00000641573 SPECC1LQ69YQ0 1117 aa14.38□□□□□ -0.11
PHGDH-221ENST00000641573 SYCP3Q8IZU3 236 aa14.38□□□□□ -0.11
PHGDH-221ENST00000641573 GOLGA5Q8TBA6 731 aa14.38□□□□□ -0.11
PHGDH-221ENST00000641573 TMEM143Q96AN5 459 aa14.38□□□□□ -0.11
PHGDH-221ENST00000641573 IFT74Q96LB3 600 aa14.38□□□□□ -0.11
PHGDH-221ENST00000641573 NOC4LQ9BVI4 516 aaKnown RBP14.38□□□□□ -0.11
PHGDH-221ENST00000641573 IKZF4Q9H2S9 585 aa14.38□□□□□ -0.11
PHGDH-221ENST00000641573 TMEM206Q9H813 350 aa14.38□□□□□ -0.11
PHGDH-221ENST00000641573 KMT5AQ9NQR1 393 aa14.38□□□□□ -0.11
PHGDH-221ENST00000641573 ERAP1Q9NZ08 941 aa14.38□□□□□ -0.11
PHGDH-221ENST00000641573 KCNG1Q9UIX4 513 aa14.38□□□□□ -0.11
PHGDH-221ENST00000641573 TRPC6Q9Y210 931 aa14.38□□□□□ -0.11
PHGDH-221ENST00000641573 MYH9P35579 1960 aaKnown RBP14.37□□□□□ -0.11
PHGDH-221ENST00000641573 DNM1LO00429 736 aa14.37□□□□□ -0.11
PHGDH-221ENST00000641573 PES1O00541 588 aaKnown RBP14.37□□□□□ -0.11
PHGDH-221ENST00000641573 CLIC2O15247 247 aa14.37□□□□□ -0.11
PHGDH-221ENST00000641573 PPFIA4O75335 1185 aa14.37□□□□□ -0.11
PHGDH-221ENST00000641573 MMP3P08254 477 aa14.37□□□□□ -0.11
PHGDH-221ENST00000641573 UBXN1Q04323 297 aa14.37□□□□□ -0.11
PHGDH-221ENST00000641573 TBC1D8BQ0IIM8 1120 aa14.37□□□□□ -0.11
PHGDH-221ENST00000641573 TBX2Q13207 712 aaPredicted RBP14.37□□□□□ -0.11
PHGDH-221ENST00000641573 ARID5BQ14865 1188 aa14.37□□□□□ -0.11
PHGDH-221ENST00000641573 MAN2A1Q16706 1144 aa14.37□□□□□ -0.11
PHGDH-221ENST00000641573 VWA3BQ502W6 1294 aa14.37□□□□□ -0.11
PHGDH-221ENST00000641573 HS2ST1Q7LGA3 356 aa14.37□□□□□ -0.11
PHGDH-221ENST00000641573 EXOC8Q8IYI6 725 aa14.37□□□□□ -0.11
PHGDH-221ENST00000641573 TMEM161BQ8NDZ6 487 aa14.37□□□□□ -0.11
PHGDH-221ENST00000641573 ASAP3Q8TDY4 903 aa14.37□□□□□ -0.11
PHGDH-221ENST00000641573 HVCN1Q96D96 273 aa14.37□□□□□ -0.11
PHGDH-221ENST00000641573 NTPCRQ9BSD7 190 aaKnown RBP14.37□□□□□ -0.11
PHGDH-221ENST00000641573 KIFC3Q9BVG8 833 aa14.37□□□□□ -0.11
PHGDH-221ENST00000641573 GBP3Q9H0R5 595 aa14.37□□□□□ -0.11
PHGDH-221ENST00000641573 KCNF1Q9H3M0 494 aa14.37□□□□□ -0.11
PHGDH-221ENST00000641573 AGPAT3Q9NRZ7 376 aa14.37□□□□□ -0.11
PHGDH-221ENST00000641573 DDX20Q9UHI6 824 aaKnown RBP14.37□□□□□ -0.11
PHGDH-221ENST00000641573 GNEQ9Y223 722 aaKnown RBP14.37□□□□□ -0.11
PHGDH-221ENST00000641573 LTBP2Q14767 1821 aa14.36□□□□□ -0.11
PHGDH-221ENST00000641573 FRMPD3Q5JV73 1810 aa14.36□□□□□ -0.11
PHGDH-221ENST00000641573 DENND3A2RUS2 1198 aa14.36□□□□□ -0.11
PHGDH-221ENST00000641573 ZBTB42B2RXF5 422 aa14.36□□□□□ -0.11
PHGDH-221ENST00000641573 DYNC1LI2O43237 492 aaPredicted RBP14.36□□□□□ -0.11
PHGDH-221ENST00000641573 HOXD8P13378 290 aaPredicted RBP14.36□□□□□ -0.11
PHGDH-221ENST00000641573 GLRA2P23416 452 aa14.36□□□□□ -0.11
PHGDH-221ENST00000641573 DNM2P50570 870 aa14.36□□□□□ -0.11
PHGDH-221ENST00000641573 MARSP56192 900 aaKnown RBP14.36□□□□□ -0.11
PHGDH-221ENST00000641573 ZNF484Q5JVG2 852 aa14.36□□□□□ -0.11
PHGDH-221ENST00000641573 MIIPQ5JXC2 388 aa14.36□□□□□ -0.11
PHGDH-221ENST00000641573 ZSCAN30Q86W11 494 aa14.36□□□□□ -0.11
PHGDH-221ENST00000641573 CCDC150Q8NCX0 1101 aa14.36□□□□□ -0.11
PHGDH-221ENST00000641573 CACTINQ8WUQ7 758 aaKnown RBP14.36□□□□□ -0.11
PHGDH-221ENST00000641573 C16orf70Q9BSU1 422 aa14.36□□□□□ -0.11
PHGDH-221ENST00000641573 RNPEPQ9H4A4 650 aa14.36□□□□□ -0.11
PHGDH-221ENST00000641573 FAM184BQ9ULE4 1060 aa14.36□□□□□ -0.11
PHGDH-221ENST00000641573 TBX20Q9UMR3 447 aa14.36□□□□□ -0.11
PHGDH-221ENST00000641573 EXOC7Q9UPT5 735 aa14.36□□□□□ -0.11
PHGDH-221ENST00000641573 ZKSCAN5Q9Y2L8 839 aa14.36□□□□□ -0.11
PHGDH-221ENST00000641573 ITIH6Q6UXX5 1313 aa14.36□□□□□ -0.11
PHGDH-221ENST00000641573 MYH11P35749 1972 aa14.35□□□□□ -0.11
PHGDH-221ENST00000641573 KBTBD13C9JR72 458 aa14.35□□□□□ -0.11
PHGDH-221ENST00000641573 H0YCG3 227 aa14.35□□□□□ -0.11
PHGDH-221ENST00000641573 SLC16A3O15427 465 aaKnown RBP14.35□□□□□ -0.11
PHGDH-221ENST00000641573 ZNF286BP0CG31 522 aa14.35□□□□□ -0.11
PHGDH-221ENST00000641573 PPP2R5AQ15172 486 aa14.35□□□□□ -0.11
PHGDH-221ENST00000641573 DGKDQ16760 1214 aa14.35□□□□□ -0.11
PHGDH-221ENST00000641573 FKBP15Q5T1M5 1219 aa14.35□□□□□ -0.11
PHGDH-221ENST00000641573 IER5Q5VY09 327 aa14.35□□□□□ -0.11
PHGDH-221ENST00000641573 CEP135Q66GS9 1140 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 117.4 ms