RNA–Protein interactions for RNA: ENST00000641371.1

PHGDH-215, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 725 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-215ENST00000641371 ACVR2BQ13705 512 aa10.62□□□□□ -0.71
PHGDH-215ENST00000641371 MORN1Q5T089 497 aa10.62□□□□□ -0.71
PHGDH-215ENST00000641371 TCERG1LQ5VWI1 586 aa10.62□□□□□ -0.71
PHGDH-215ENST00000641371 E4F1Q66K89 784 aaPredicted RBP10.62□□□□□ -0.71
PHGDH-215ENST00000641371 ZPBP2Q6X784 338 aa10.62□□□□□ -0.71
PHGDH-215ENST00000641371 NYAP1Q6ZVC0 841 aa10.62□□□□□ -0.71
PHGDH-215ENST00000641371 MAEAQ7L5Y9 396 aa10.62□□□□□ -0.71
PHGDH-215ENST00000641371 EEPD1Q7L9B9 569 aa10.62□□□□□ -0.71
PHGDH-215ENST00000641371 EHBP1Q8NDI1 1231 aa10.62□□□□□ -0.71
PHGDH-215ENST00000641371 KIF18AQ8NI77 898 aa10.62□□□□□ -0.71
PHGDH-215ENST00000641371 TMC2Q8TDI7 906 aa10.62□□□□□ -0.71
PHGDH-215ENST00000641371 CPLX3Q8WVH0 158 aa10.62□□□□□ -0.71
PHGDH-215ENST00000641371 PPP1R13BQ96KQ4 1090 aa10.62□□□□□ -0.71
PHGDH-215ENST00000641371 PCYT2Q99447 389 aa10.62□□□□□ -0.71
PHGDH-215ENST00000641371 XPNPEP1Q9NQW7 623 aa10.62□□□□□ -0.71
PHGDH-215ENST00000641371 HSPBP1Q9NZL4 362 aa10.62□□□□□ -0.71
PHGDH-215ENST00000641371 MYO1AQ9UBC5 1043 aa10.62□□□□□ -0.71
PHGDH-215ENST00000641371 PPP2R2CQ9Y2T4 447 aa10.62□□□□□ -0.71
PHGDH-215ENST00000641371 Q9Y3F1 56 aa10.62□□□□□ -0.71
PHGDH-215ENST00000641371 IGKV6-21A0A0C4DH24 114 aa10.61□□□□□ -0.71
PHGDH-215ENST00000641371 CLIC2O15247 247 aa10.61□□□□□ -0.71
PHGDH-215ENST00000641371 CA12O43570 354 aa10.61□□□□□ -0.71
PHGDH-215ENST00000641371 PEX10O60683 326 aa10.61□□□□□ -0.71
PHGDH-215ENST00000641371 TMOD1P28289 359 aa10.61□□□□□ -0.71
PHGDH-215ENST00000641371 CNGA1P29973 690 aa10.61□□□□□ -0.71
PHGDH-215ENST00000641371 DGKDQ16760 1214 aa10.61□□□□□ -0.71
PHGDH-215ENST00000641371 HSDL1Q3SXM5 330 aa10.61□□□□□ -0.71
PHGDH-215ENST00000641371 SLC9C1Q4G0N8 1177 aa10.61□□□□□ -0.71
PHGDH-215ENST00000641371 DCAF17Q5H9S7 520 aaPredicted RBP10.61□□□□□ -0.71
PHGDH-215ENST00000641371 SLC35C1Q96A29 364 aa10.61□□□□□ -0.71
PHGDH-215ENST00000641371 BICD1Q96G01 975 aa10.61□□□□□ -0.71
PHGDH-215ENST00000641371 EEF2KMTQ96G04 330 aa10.61□□□□□ -0.71
PHGDH-215ENST00000641371 FBXL18Q96ME1 805 aa10.61□□□□□ -0.71
PHGDH-215ENST00000641371 CEP89Q96ST8 783 aa10.61□□□□□ -0.71
PHGDH-215ENST00000641371 APBA2Q99767 749 aa10.61□□□□□ -0.71
PHGDH-215ENST00000641371 LSM14BQ9BX40 385 aaKnown RBP10.61□□□□□ -0.71
PHGDH-215ENST00000641371 NFKBIZQ9BYH8 718 aa10.61□□□□□ -0.71
PHGDH-215ENST00000641371 TSGA10Q9BZW7 698 aa10.61□□□□□ -0.71
PHGDH-215ENST00000641371 KATNBL1Q9H079 304 aa10.61□□□□□ -0.71
PHGDH-215ENST00000641371 GPRC5CQ9NQ84 441 aa10.61□□□□□ -0.71
PHGDH-215ENST00000641371 TRPC6Q9Y210 931 aa10.61□□□□□ -0.71
PHGDH-215ENST00000641371 EPN1Q9Y6I3 576 aaPredicted RBP10.61□□□□□ -0.71
PHGDH-215ENST00000641371 STYXL1Q9Y6J8 313 aa10.61□□□□□ -0.71
PHGDH-215ENST00000641371 ATP8B3O60423 1300 aa10.6□□□□□ -0.71
PHGDH-215ENST00000641371 KAT6AQ92794 2004 aa10.6□□□□□ -0.71
PHGDH-215ENST00000641371 RRN3P2A6NIE6 340 aa10.6□□□□□ -0.71
PHGDH-215ENST00000641371 EIF3CLB5ME19 914 aaKnown RBP10.6□□□□□ -0.71
PHGDH-215ENST00000641371 K7ERI5 159 aa10.6□□□□□ -0.71
PHGDH-215ENST00000641371 IGF2BP3O00425 579 aaKnown RBP eCLIP10.6□□□□□ -0.71
PHGDH-215ENST00000641371 HNRNPDLO14979 420 aaKnown RBP10.6□□□□□ -0.71
PHGDH-215ENST00000641371 ADCY3O60266 1144 aa10.6□□□□□ -0.71
PHGDH-215ENST00000641371 GFPT2O94808 682 aa10.6□□□□□ -0.71
PHGDH-215ENST00000641371 GLRA2P23416 452 aa10.6□□□□□ -0.71
PHGDH-215ENST00000641371 FMO5P49326 533 aa10.6□□□□□ -0.71
PHGDH-215ENST00000641371 LIG4P49917 911 aa10.6□□□□□ -0.71
PHGDH-215ENST00000641371 CYP2J2P51589 502 aa10.6□□□□□ -0.71
PHGDH-215ENST00000641371 VAMP7P51809 220 aa10.6□□□□□ -0.71
PHGDH-215ENST00000641371 POU5F1Q01860 360 aaKnown RBP10.6□□□□□ -0.71
PHGDH-215ENST00000641371 KCNA1Q09470 495 aa10.6□□□□□ -0.71
PHGDH-215ENST00000641371 NOGQ13253 232 aa10.6□□□□□ -0.71
PHGDH-215ENST00000641371 MAPK8IP2Q13387 824 aaPredicted RBP10.6□□□□□ -0.71
PHGDH-215ENST00000641371 TUBB2AQ13885 445 aa10.6□□□□□ -0.71
PHGDH-215ENST00000641371 PLCB4Q15147 1175 aa10.6□□□□□ -0.71
PHGDH-215ENST00000641371 SPA17Q15506 151 aa10.6□□□□□ -0.71
PHGDH-215ENST00000641371 SURF1Q15526 300 aa10.6□□□□□ -0.71
PHGDH-215ENST00000641371 C10orf76Q5T2E6 689 aa10.6□□□□□ -0.71
PHGDH-215ENST00000641371 CDCA2Q69YH5 1023 aaPredicted RBP10.6□□□□□ -0.71
PHGDH-215ENST00000641371 PDXDC1Q6P996 788 aa10.6□□□□□ -0.71
PHGDH-215ENST00000641371 VPS36Q86VN1 386 aa10.6□□□□□ -0.71
PHGDH-215ENST00000641371 GPD1LQ8N335 351 aa10.6□□□□□ -0.71
PHGDH-215ENST00000641371 ZNF526Q8TF50 670 aaPredicted RBP10.6□□□□□ -0.71
PHGDH-215ENST00000641371 POMGNT1Q8WZA1 660 aa10.6□□□□□ -0.71
PHGDH-215ENST00000641371 CCDC42Q96M95 316 aa10.6□□□□□ -0.71
PHGDH-215ENST00000641371 EIF3CQ99613 913 aaKnown RBP10.6□□□□□ -0.71
PHGDH-215ENST00000641371 TUBB2BQ9BVA1 445 aa10.6□□□□□ -0.71
PHGDH-215ENST00000641371 FAM207AQ9NSI2 230 aaPredicted RBP10.6□□□□□ -0.71
PHGDH-215ENST00000641371 CPA4Q9UI42 421 aa10.6□□□□□ -0.71
PHGDH-215ENST00000641371 ABT1Q9ULW3 272 aaKnown RBP10.6□□□□□ -0.71
PHGDH-215ENST00000641371 USP20Q9Y2K6 914 aa10.6□□□□□ -0.71
PHGDH-215ENST00000641371 ADGRG1Q9Y653 693 aa10.6□□□□□ -0.71
PHGDH-215ENST00000641371 CEP350Q5VT06 3117 aa10.6□□□□□ -0.71
PHGDH-215ENST00000641371 CASP8AP2Q9UKL3 1982 aa10.59□□□□□ -0.71
PHGDH-215ENST00000641371 ZSWIM8A7E2V4 1837 aa10.59□□□□□ -0.71
PHGDH-215ENST00000641371 TMEM150BA6NC51 233 aa10.59□□□□□ -0.71
PHGDH-215ENST00000641371 LRRIQ4A6NIV6 560 aa10.59□□□□□ -0.71
PHGDH-215ENST00000641371 ZNF233A6NK53 670 aa10.59□□□□□ -0.71
PHGDH-215ENST00000641371 EXTL3O43909 919 aa10.59□□□□□ -0.71
PHGDH-215ENST00000641371 KIF5CO60282 957 aa10.59□□□□□ -0.71
PHGDH-215ENST00000641371 KPNA6O60684 536 aa10.59□□□□□ -0.71
PHGDH-215ENST00000641371 TOMM70O94826 608 aa10.59□□□□□ -0.71
PHGDH-215ENST00000641371 NDUFA10O95299 355 aa10.59□□□□□ -0.71
PHGDH-215ENST00000641371 SNAI1O95863 264 aaPredicted RBP10.59□□□□□ -0.71
PHGDH-215ENST00000641371 SERPING1P05155 500 aa10.59□□□□□ -0.71
PHGDH-215ENST00000641371 LGALS2P05162 132 aa10.59□□□□□ -0.71
PHGDH-215ENST00000641371 RPLP2P05387 115 aaKnown RBP10.59□□□□□ -0.71
PHGDH-215ENST00000641371 CASP4P49662 377 aa10.59□□□□□ -0.71
PHGDH-215ENST00000641371 AP3M2P53677 418 aa10.59□□□□□ -0.71
PHGDH-215ENST00000641371 FCGRTP55899 365 aa10.59□□□□□ -0.71
PHGDH-215ENST00000641371 ETF1P62495 437 aaKnown RBP10.59□□□□□ -0.71
PHGDH-215ENST00000641371 MYL7Q01449 175 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms