RNA–Protein interactions for RNA: ENST00000640916.1

SCARB2-226, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 689 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-226ENST00000640916 ZNF707Q96C28 371 aaPredicted RBP9.29□□□□□ -0.92
SCARB2-226ENST00000640916 IGSF21Q96ID5 467 aa9.29□□□□□ -0.92
SCARB2-226ENST00000640916 PPP1R16BQ96T49 567 aa9.29□□□□□ -0.92
SCARB2-226ENST00000640916 PKD2L1Q9P0L9 805 aa9.29□□□□□ -0.92
SCARB2-226ENST00000640916 CLUHO75153 1309 aa9.29□□□□□ -0.92
SCARB2-226ENST00000640916 NBEAQ8NFP9 2946 aa9.28□□□□□ -0.92
SCARB2-226ENST00000640916 IGKV6D-21A0A0A0MT36 114 aa9.28□□□□□ -0.92
SCARB2-226ENST00000640916 PNMA6FA0A0J9YX94 578 aa9.28□□□□□ -0.92
SCARB2-226ENST00000640916 CCDC195A0A1B0GUA6 201 aa9.28□□□□□ -0.92
SCARB2-226ENST00000640916 SHISA7A6NL88 538 aa9.28□□□□□ -0.92
SCARB2-226ENST00000640916 PIK3CDO00329 1044 aa9.28□□□□□ -0.92
SCARB2-226ENST00000640916 GALTP07902 379 aa9.28□□□□□ -0.92
SCARB2-226ENST00000640916 LAMP2P13473 410 aa9.28□□□□□ -0.92
SCARB2-226ENST00000640916 ALDH7A1P49419 539 aaKnown RBP9.28□□□□□ -0.92
SCARB2-226ENST00000640916 GPC5P78333 572 aa9.28□□□□□ -0.92
SCARB2-226ENST00000640916 DMWDQ09019 674 aa9.28□□□□□ -0.92
SCARB2-226ENST00000640916 SNW1Q13573 536 aaKnown RBP9.28□□□□□ -0.92
SCARB2-226ENST00000640916 NONOQ15233 471 aaKnown RBP eCLIP9.28□□□□□ -0.92
SCARB2-226ENST00000640916 CCDC178Q5BJE1 867 aa9.28□□□□□ -0.92
SCARB2-226ENST00000640916 ODR4Q5SWX8 454 aa9.28□□□□□ -0.92
SCARB2-226ENST00000640916 MAP4K1Q92918 833 aa9.28□□□□□ -0.92
SCARB2-226ENST00000640916 CLDN23Q96B33 292 aa9.28□□□□□ -0.92
SCARB2-226ENST00000640916 TMEM169Q96HH4 297 aa9.28□□□□□ -0.92
SCARB2-226ENST00000640916 KCNK17Q96T54 332 aa9.28□□□□□ -0.92
SCARB2-226ENST00000640916 RNF41Q9H4P4 317 aaPredicted RBP9.28□□□□□ -0.92
SCARB2-226ENST00000640916 PRMT8Q9NR22 394 aaPredicted RBP9.28□□□□□ -0.92
SCARB2-226ENST00000640916 ZMIZ1Q9ULJ6 1067 aa9.28□□□□□ -0.92
SCARB2-226ENST00000640916 NUMBLQ9Y6R0 609 aa9.28□□□□□ -0.92
SCARB2-226ENST00000640916 MYH9P35579 1960 aaKnown RBP9.28□□□□□ -0.92
SCARB2-226ENST00000640916 NOTCH4Q99466 2003 aa9.27□□□□□ -0.92
SCARB2-226ENST00000640916 GREB1Q4ZG55 1949 aa9.27□□□□□ -0.93
SCARB2-226ENST00000640916 A0A0U1RQF3 1178 aa9.27□□□□□ -0.93
SCARB2-226ENST00000640916 C1QTNF9BB2RNN3 333 aa9.27□□□□□ -0.93
SCARB2-226ENST00000640916 RFPL2O75678 378 aa9.27□□□□□ -0.93
SCARB2-226ENST00000640916 ATG7O95352 703 aa9.27□□□□□ -0.93
SCARB2-226ENST00000640916 VTNP04004 478 aa9.27□□□□□ -0.93
SCARB2-226ENST00000640916 C1QTNF9P0C862 333 aa9.27□□□□□ -0.93
SCARB2-226ENST00000640916 ATP4AP20648 1035 aa9.27□□□□□ -0.93
SCARB2-226ENST00000640916 KLRC2P26717 231 aa9.27□□□□□ -0.93
SCARB2-226ENST00000640916 STAT5BP51692 787 aa9.27□□□□□ -0.93
SCARB2-226ENST00000640916 ACTR2P61160 394 aa9.27□□□□□ -0.93
SCARB2-226ENST00000640916 LSM11P83369 360 aaKnown RBP eCLIP9.27□□□□□ -0.93
SCARB2-226ENST00000640916 BMS1Q14692 1282 aaKnown RBP9.27□□□□□ -0.93
SCARB2-226ENST00000640916 LPAL2Q16609 132 aa9.27□□□□□ -0.93
SCARB2-226ENST00000640916 ABI1Q8IZP0 508 aa9.27□□□□□ -0.93
SCARB2-226ENST00000640916 FGF14Q92915 247 aa9.27□□□□□ -0.93
SCARB2-226ENST00000640916 BCO2Q9BYV7 579 aa9.27□□□□□ -0.93
SCARB2-226ENST00000640916 OSBPL6Q9BZF3 934 aa9.27□□□□□ -0.93
SCARB2-226ENST00000640916 NRDE2Q9H7Z3 1164 aa9.27□□□□□ -0.93
SCARB2-226ENST00000640916 JADE2Q9NQC1 790 aa9.27□□□□□ -0.93
SCARB2-226ENST00000640916 MAN1C1Q9NR34 630 aa9.27□□□□□ -0.93
SCARB2-226ENST00000640916 DNAJB4Q9UDY4 337 aa9.27□□□□□ -0.93
SCARB2-226ENST00000640916 LOC400499M0QZD8 3231 aa9.26□□□□□ -0.93
SCARB2-226ENST00000640916 FAM170BA6NMN3 283 aa9.26□□□□□ -0.93
SCARB2-226ENST00000640916 SOBPA7XYQ1 873 aa9.26□□□□□ -0.93
SCARB2-226ENST00000640916 TK2O00142 265 aa9.26□□□□□ -0.93
SCARB2-226ENST00000640916 INPPL1O15357 1258 aa9.26□□□□□ -0.93
SCARB2-226ENST00000640916 HRO43593 1189 aa9.26□□□□□ -0.93
SCARB2-226ENST00000640916 ZC3H11AO75152 810 aaKnown RBP eCLIP9.26□□□□□ -0.93
SCARB2-226ENST00000640916 ZMYND10O75800 440 aa9.26□□□□□ -0.93
SCARB2-226ENST00000640916 C22orf31O95567 290 aa9.26□□□□□ -0.93
SCARB2-226ENST00000640916 MX1P20591 662 aa9.26□□□□□ -0.93
SCARB2-226ENST00000640916 CD72P21854 359 aa9.26□□□□□ -0.93
SCARB2-226ENST00000640916 NMIQ13287 307 aaPredicted RBP9.26□□□□□ -0.93
SCARB2-226ENST00000640916 MTMR1Q13613 665 aa9.26□□□□□ -0.93
SCARB2-226ENST00000640916 GRM4Q14833 912 aa9.26□□□□□ -0.93
SCARB2-226ENST00000640916 MLF2Q15773 248 aaPredicted RBP9.26□□□□□ -0.93
SCARB2-226ENST00000640916 SLC44A4Q53GD3 710 aa9.26□□□□□ -0.93
SCARB2-226ENST00000640916 PARM1Q6UWI2 310 aa9.26□□□□□ -0.93
SCARB2-226ENST00000640916 CYP26C1Q6V0L0 522 aa9.26□□□□□ -0.93
SCARB2-226ENST00000640916 PRR23CQ6ZRP0 262 aa9.26□□□□□ -0.93
SCARB2-226ENST00000640916 KDF1Q8NAX2 398 aaPredicted RBP9.26□□□□□ -0.93
SCARB2-226ENST00000640916 TMEM87AQ8NBN3 555 aa9.26□□□□□ -0.93
SCARB2-226ENST00000640916 EVI5LQ96CN4 794 aa9.26□□□□□ -0.93
SCARB2-226ENST00000640916 SHDQ96IW2 340 aa9.26□□□□□ -0.93
SCARB2-226ENST00000640916 CDHR1Q96JP9 859 aa9.26□□□□□ -0.93
SCARB2-226ENST00000640916 ADAMTS10Q9H324 1103 aa9.26□□□□□ -0.93
SCARB2-226ENST00000640916 AZI2Q9H6S1 392 aa9.26□□□□□ -0.93
SCARB2-226ENST00000640916 SENP2Q9HC62 589 aa9.26□□□□□ -0.93
SCARB2-226ENST00000640916 JPH1Q9HDC5 661 aaPredicted RBP9.26□□□□□ -0.93
SCARB2-226ENST00000640916 LTB4R2Q9NPC1 389 aa9.26□□□□□ -0.93
SCARB2-226ENST00000640916 SEMA4GQ9NTN9 838 aa9.26□□□□□ -0.93
SCARB2-226ENST00000640916 SLC9A2Q9UBY0 812 aa9.26□□□□□ -0.93
SCARB2-226ENST00000640916 GMEB2Q9UKD1 530 aa9.26□□□□□ -0.93
SCARB2-226ENST00000640916 CEP295Q9C0D2 2601 aa9.26□□□□□ -0.93
SCARB2-226ENST00000640916 DMXL2Q8TDJ6 3036 aa9.26□□□□□ -0.93
SCARB2-226ENST00000640916 LAMA1P25391 3075 aa9.25□□□□□ -0.93
SCARB2-226ENST00000640916 MEIS3P2A8K0S8 358 aa9.25□□□□□ -0.93
SCARB2-226ENST00000640916 BHMG1C9JSJ3 638 aaPredicted RBP9.25□□□□□ -0.93
SCARB2-226ENST00000640916 ZNF213O14771 459 aa9.25□□□□□ -0.93
SCARB2-226ENST00000640916 HBP1O60381 514 aa9.25□□□□□ -0.93
SCARB2-226ENST00000640916 LRP3O75074 770 aa9.25□□□□□ -0.93
SCARB2-226ENST00000640916 EFEMP2O95967 443 aa9.25□□□□□ -0.93
SCARB2-226ENST00000640916 MYBP10242 640 aa9.25□□□□□ -0.93
SCARB2-226ENST00000640916 MS4A1P11836 297 aa9.25□□□□□ -0.93
SCARB2-226ENST00000640916 TARSP26639 723 aaKnown RBP9.25□□□□□ -0.93
SCARB2-226ENST00000640916 SLC11A1P49279 550 aa9.25□□□□□ -0.93
SCARB2-226ENST00000640916 NT5C2P49902 561 aa9.25□□□□□ -0.93
SCARB2-226ENST00000640916 TRAF1Q13077 416 aa9.25□□□□□ -0.93
SCARB2-226ENST00000640916 ITGB3BPQ13352 177 aaPredicted RBP9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms